RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, human

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-215	ENST00000484186	USP17L10	C9JJH3	530 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	ADCY3	O60266	1144 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	SLC34A2	O95436	690 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	FLT3LG	P49771	235 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	MTMR2	Q13614	643 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	SLC9C2	Q5TAH2	1124 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	TATDN1	Q6P1N9	297 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	TTC6	Q86TZ1	520 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	SLAIN1	Q8ND83	568 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	NKX2-3	Q8TAU0	364 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	COA7	Q96BR5	231 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	DNAJC2	Q99543	621 aa	Known RBP	11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	RIOK1	Q9BRS2	568 aa	Known RBP	11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	BCL11A	Q9H165	835 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	EHD4	Q9H223	541 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	ZBTB21	Q9ULJ3	1066 aa		11.45	□□□□□ -0.58
NUP50-215	ENST00000484186	CDK5RAP2	Q96SN8	1893 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	MAGEB6P1	A0A0J9YX57	407 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	GOLIM4	O00461	696 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	CCL5	P13501	91 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	PDE6A	P16499	860 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	HOXA7	P31268	230 aa	Predicted RBP	11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	IRF5	Q13568	498 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	C20orf194	Q5TEA3	1177 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	PXYLP1	Q8TE99	480 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	P2RX7	Q99572	595 aa	Known RBP	11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	RNF208	Q9H0X6	261 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	SERPINB13	Q9UIV8	391 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	FOCAD	Q5VW36	1801 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	ATAD5	Q96QE3	1844 aa		11.44	□□□□□ -0.58
NUP50-215	ENST00000484186	ZNF532	Q9HCE3	1301 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	MGAM	O43451	1857 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	TCRBV5S4A2T	A0A5A2	114 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	GH2	P01242	217 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	POLR3D	P05423	398 aa	Predicted RBP	11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	GJB1	P08034	283 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	ATP5J	P18859	108 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	GJA8	P48165	433 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	PLCD1	P51178	756 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	IRX3	P78415	501 aa	Predicted RBP	11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	CERKL	Q49MI3	558 aa	Predicted RBP	11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	BOLA2	Q9H3K6	86 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	PAG1	Q9NWQ8	432 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	MORF4L1	Q9UBU8	362 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	LOC285556	D6RIA3	1793 aa		11.43	□□□□□ -0.58
NUP50-215	ENST00000484186	CENPF	P49454	3210 aa		11.42	□□□□□ -0.58
NUP50-215	ENST00000484186	ELN	P15502	786 aa		11.42	□□□□□ -0.58
NUP50-215	ENST00000484186	USP17L2	Q6R6M4	530 aa		11.42	□□□□□ -0.58
NUP50-215	ENST00000484186	GCC1	Q96CN9	775 aa		11.42	□□□□□ -0.58
NUP50-215	ENST00000484186	SHISA4	Q96DD7	197 aa		11.42	□□□□□ -0.58
NUP50-215	ENST00000484186	EDC3	Q96F86	508 aa	Known RBP	11.42	□□□□□ -0.58
NUP50-215	ENST00000484186	LRRCC1	Q9C099	1032 aa		11.42	□□□□□ -0.58
NUP50-215	ENST00000484186	CABP5	Q9NP86	173 aa		11.42	□□□□□ -0.58
NUP50-215	ENST00000484186	EMILIN3	Q9NT22	766 aa		11.42	□□□□□ -0.58
NUP50-215	ENST00000484186	MYH1	P12882	1939 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	INHA	P05111	366 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	SHMT1	P34896	483 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	ADD2	P35612	726 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	HERVK_113	P62684	666 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	RAB3GAP1	Q15042	981 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	ABCB5	Q2M3G0	1257 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	LCORL	Q8N3X6	602 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	GPRC5A	Q8NFJ5	357 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	HAUS7	Q99871	368 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	UNC93B1	Q9H1C4	597 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	MCM9	Q9NXL9	1143 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	GJD2	Q9UKL4	321 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	TAOK2	Q9UL54	1235 aa		11.41	□□□□□ -0.58
NUP50-215	ENST00000484186	SMARCA5	O60264	1052 aa	Predicted RBP	11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	SGPL1	O95470	568 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	CAPN2	P17655	700 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	USP14	P54578	494 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	GABPA	Q06546	454 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	U2AF1L4	Q8WU68	220 aa	Known RBP	11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	SDR42E1	Q8WUS8	393 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	C12orf42	Q96LP6	360 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	FEZ1	Q99689	392 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	KIAA1683	Q9H0B3	1180 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	ARMT1	Q9H993	441 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	TXNRD2	Q9NNW7	524 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	RBPJL	Q9UBG7	517 aa		11.4	□□□□□ -0.58
NUP50-215	ENST00000484186	USP17L15	C9J2P7	530 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	USP17L13	C9JLJ4	530 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	USP17L11	C9JVI0	530 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	USP17L18	D6R9N7	530 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	USP17L22	D6RA61	530 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	USP17L17	D6RBQ6	530 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	USP17L19	D6RCP7	530 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	USP17L20	D6RJB6	530 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	PEX10	O60683	326 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	GUCY1A2	P33402	732 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	USP17L24	Q0WX57	530 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	ZYX	Q15942	572 aa	Known RBP	11.39	□□□□□ -0.59
NUP50-215	ENST00000484186		Q3C1V9	767 aa		11.39	□□□□□ -0.59
NUP50-215	ENST00000484186	SLFNL1	Q499Z3	407 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms