RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, human

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-208	ENST00000483868	ANGEL1	Q9UNK9	670 aa	Known RBP	32.7	■■■□□ 2.83
TPRA1-208	ENST00000483868	PPP1R12B	O60237	982 aa	Predicted RBP	32.69	■■■□□ 2.82
TPRA1-208	ENST00000483868	KDM4A	O75164	1064 aa		32.69	■■■□□ 2.82
TPRA1-208	ENST00000483868	ZNF444	Q8N0Y2	327 aa	Predicted RBP	32.69	■■■□□ 2.82
TPRA1-208	ENST00000483868	ZKSCAN4	Q969J2	545 aa	Predicted RBP	32.69	■■■□□ 2.82
TPRA1-208	ENST00000483868	ZSWIM5	Q9P217	1185 aa		32.69	■■■□□ 2.82
TPRA1-208	ENST00000483868	PC	P11498	1178 aa	Known RBP	32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	CYB5R4	Q7L1T6	521 aa		32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	CHST3	Q7LGC8	479 aa		32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	NCOA7	Q8NI08	942 aa		32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	NEK1	Q96PY6	1258 aa		32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	ZNF287	Q9HBT7	754 aa		32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	ANAPC15	P60006	121 aa		32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	TFAP4	Q01664	338 aa		32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	TTLL12	Q14166	644 aa	Predicted RBP	32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	MB21D2	Q8IYB1	491 aa	Predicted RBP	32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	CNNM2	Q9H8M5	875 aa		32.68	■■■□□ 2.82
TPRA1-208	ENST00000483868	CAP2	P40123	477 aa		32.67	■■■□□ 2.82
TPRA1-208	ENST00000483868	TRDN	Q13061	729 aa		32.67	■■■□□ 2.82
TPRA1-208	ENST00000483868	KRT32	Q14532	448 aa		32.67	■■■□□ 2.82
TPRA1-208	ENST00000483868	KRT23	Q9C075	422 aa		32.67	■■■□□ 2.82
TPRA1-208	ENST00000483868	IL17RA	Q96F46	866 aa		32.66	■■■□□ 2.82
TPRA1-208	ENST00000483868	TAOK2	Q9UL54	1235 aa		32.66	■■■□□ 2.82
TPRA1-208	ENST00000483868	TRPM7	Q96QT4	1865 aa		32.66	■■■□□ 2.82
TPRA1-208	ENST00000483868	UBE2Q2L	H0YL09	131 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	NMT2	O60551	498 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	GH2	P01242	217 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	ANTXR2	P58335	489 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	RALYL	Q86SE5	291 aa	Known RBP	32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	ESR2	Q92731	530 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	TCEANC2	Q96MN5	208 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	TSPY2	A6NKD2	308 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	MPHOSPH10	O00566	681 aa	Known RBP	32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	CAST	P20810	708 aa	Known RBP	32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	GUCY1A2	P33402	732 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	ABCB5	Q2M3G0	1257 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	CLEC10A	Q8IUN9	316 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	ZKSCAN3	Q9BRR0	538 aa		32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	UPF3B	Q9BZI7	483 aa	Known RBP	32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	GBA2	Q9HCG7	927 aa	Predicted RBP	32.65	■■■□□ 2.82
TPRA1-208	ENST00000483868	OTOF	Q9HC10	1997 aa		32.64	■■■□□ 2.82
TPRA1-208	ENST00000483868	PAPPA2	Q9BXP8	1791 aa		32.64	■■■□□ 2.82
TPRA1-208	ENST00000483868	TSPY3	P0CV98	308 aa		32.64	■■■□□ 2.82
TPRA1-208	ENST00000483868	TSPY8	P0CW00	308 aa		32.64	■■■□□ 2.82
TPRA1-208	ENST00000483868	MAP3K11	Q16584	847 aa		32.64	■■■□□ 2.82
TPRA1-208	ENST00000483868	CTNND1	O60716	968 aa	Known RBP	32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	FSTL1	Q12841	308 aa		32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	CCDC84	Q86UT8	332 aa	Predicted RBP	32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	CCDC17	Q96LX7	622 aa		32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	IL17RB	Q9NRM6	502 aa		32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	IREB2	P48200	963 aa	Known RBP	32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	MAP3K9	P80192	1104 aa		32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	NEDD1	Q8NHV4	660 aa		32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	CLMN	Q96JQ2	1002 aa		32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	LRRC2	Q9BYS8	371 aa		32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	ZBTB21	Q9ULJ3	1066 aa		32.63	■■■□□ 2.81
TPRA1-208	ENST00000483868	VGLL4	Q14135	290 aa		32.62	■■■□□ 2.81
TPRA1-208	ENST00000483868	ARMC9	Q7Z3E5	817 aa		32.62	■■■□□ 2.81
TPRA1-208	ENST00000483868	ZSWIM6	Q9HCJ5	1215 aa		32.62	■■■□□ 2.81
TPRA1-208	ENST00000483868	SEPT2	Q15019	361 aa		32.61	■■■□□ 2.81
TPRA1-208	ENST00000483868	GPHN	Q9NQX3	736 aa	Predicted RBP	32.61	■■■□□ 2.81
TPRA1-208	ENST00000483868	GREB1L	Q9C091	1923 aa	Predicted RBP	32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	ATAD5	Q96QE3	1844 aa		32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	EXOSC10	Q01780	885 aa	Known RBP	32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	BLOC1S2	Q6QNY1	142 aa		32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	TM6SF1	Q9BZW5	370 aa		32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	PSMA5	P28066	241 aa		32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	RAB3GAP1	Q15042	981 aa		32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	LDLRAD1	Q5T700	205 aa		32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	SCYL3	Q8IZE3	742 aa		32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	C2orf69	Q8N8R5	385 aa		32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	SNCAIP	Q9Y6H5	919 aa		32.6	■■■□□ 2.81
TPRA1-208	ENST00000483868	PLIN4	Q96Q06	1357 aa		32.59	■■■□□ 2.81
TPRA1-208	ENST00000483868	IGKV6D-41	A0A0C4DH26	115 aa		32.59	■■■□□ 2.81
TPRA1-208	ENST00000483868	PRC1	O43663	620 aa		32.59	■■■□□ 2.81
TPRA1-208	ENST00000483868	DHX32	Q7L7V1	743 aa	Known RBP	32.59	■■■□□ 2.81
TPRA1-208	ENST00000483868	CEP95	Q96GE4	821 aa		32.59	■■■□□ 2.81
TPRA1-208	ENST00000483868	RPS6KB1	P23443	525 aa		32.58	■■■□□ 2.81
TPRA1-208	ENST00000483868	MCM5	P33992	734 aa		32.58	■■■□□ 2.81
TPRA1-208	ENST00000483868	TMEM179	Q6ZVK1	233 aa		32.58	■■■□□ 2.81
TPRA1-208	ENST00000483868	RUFY3	Q7L099	469 aa		32.58	■■■□□ 2.81
TPRA1-208	ENST00000483868	CABP5	Q9NP86	173 aa		32.58	■■■□□ 2.81
TPRA1-208	ENST00000483868	DOCK1	Q14185	1865 aa		32.57	■■■□□ 2.81
TPRA1-208	ENST00000483868	NOL9	Q5SY16	702 aa	Known RBP	32.57	■■■□□ 2.81
TPRA1-208	ENST00000483868	SIAH1	Q8IUQ4	282 aa		32.57	■■■□□ 2.81
TPRA1-208	ENST00000483868	ANKRD13A	Q8IZ07	590 aa		32.57	■■■□□ 2.81
TPRA1-208	ENST00000483868	CNKSR2	Q8WXI2	1034 aa		32.57	■■■□□ 2.81
TPRA1-208	ENST00000483868	FKBP1B	P68106	108 aa		32.57	■■■□□ 2.8
TPRA1-208	ENST00000483868	SENP2	Q9HC62	589 aa		32.57	■■■□□ 2.8
TPRA1-208	ENST00000483868	ASNS	P08243	561 aa		32.56	■■■□□ 2.8
TPRA1-208	ENST00000483868	HMGB1	P09429	215 aa	Known RBP	32.56	■■■□□ 2.8
TPRA1-208	ENST00000483868	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	32.56	■■■□□ 2.8
TPRA1-208	ENST00000483868	ELP3	Q9H9T3	547 aa		32.56	■■■□□ 2.8
TPRA1-208	ENST00000483868	CYP46A1	Q9Y6A2	500 aa		32.56	■■■□□ 2.8
TPRA1-208	ENST00000483868	PTPRA	P18433	802 aa		32.55	■■■□□ 2.8
TPRA1-208	ENST00000483868	IGDCC4	Q8TDY8	1250 aa		32.55	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms