RNA–Protein interactions for RNA: ENST00000481070.1

KCNMA1-220, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-220ENST00000481070 MAP2K1Q02750 393 aaPredicted RBP22.75■■□□□ 1.23
KCNMA1-220ENST00000481070 TRDNQ13061 729 aa22.75■■□□□ 1.23
KCNMA1-220ENST00000481070 SUPT20HL1Q3ZLR7 823 aa22.75■■□□□ 1.23
KCNMA1-220ENST00000481070 RALYLQ86SE5 291 aaKnown RBP22.75■■□□□ 1.23
KCNMA1-220ENST00000481070 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.75■■□□□ 1.23
KCNMA1-220ENST00000481070 SWAP70Q9UH65 585 aa22.75■■□□□ 1.23
KCNMA1-220ENST00000481070 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.75■■□□□ 1.23
KCNMA1-220ENST00000481070 KRT32Q14532 448 aa22.74■■□□□ 1.23
KCNMA1-220ENST00000481070 TSGA10IPQ3SY00 556 aa22.74■■□□□ 1.23
KCNMA1-220ENST00000481070 CHST3Q7LGC8 479 aa22.74■■□□□ 1.23
KCNMA1-220ENST00000481070 ZNF444Q8N0Y2 327 aaPredicted RBP22.74■■□□□ 1.23
KCNMA1-220ENST00000481070 NCOA7Q8NI08 942 aa22.74■■□□□ 1.23
KCNMA1-220ENST00000481070 NEK1Q96PY6 1258 aa22.74■■□□□ 1.23
KCNMA1-220ENST00000481070 HERC5Q9UII4 1024 aaKnown RBP22.74■■□□□ 1.23
KCNMA1-220ENST00000481070 SSC5DA1L4H1 1573 aa22.74■■□□□ 1.23
KCNMA1-220ENST00000481070 MPHOSPH10O00566 681 aaKnown RBP22.73■■□□□ 1.23
KCNMA1-220ENST00000481070 KDM4AO75164 1064 aa22.73■■□□□ 1.23
KCNMA1-220ENST00000481070 GDF11O95390 407 aa22.73■■□□□ 1.23
KCNMA1-220ENST00000481070 CASTP20810 708 aaKnown RBP22.73■■□□□ 1.23
KCNMA1-220ENST00000481070 RASA1P20936 1047 aa22.73■■□□□ 1.23
KCNMA1-220ENST00000481070 ANAPC15P60006 121 aa22.73■■□□□ 1.23
KCNMA1-220ENST00000481070 RRP1BQ14684 758 aaKnown RBP22.73■■□□□ 1.23
KCNMA1-220ENST00000481070 SHROOM1Q2M3G4 852 aaPredicted RBP22.73■■□□□ 1.23
KCNMA1-220ENST00000481070 METTL16Q86W50 562 aaKnown RBP22.73■■□□□ 1.23
KCNMA1-220ENST00000481070 FGRP09769 529 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 TTLL12Q14166 644 aaPredicted RBP22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 CERKLQ49MI3 558 aaPredicted RBP22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 DCAF15Q66K64 600 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 CYB5R4Q7L1T6 521 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 HOOK2Q96ED9 719 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 TCEANC2Q96MN5 208 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 KIF2CQ99661 725 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 UPF3BQ9BZI7 483 aaKnown RBP22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 KRT23Q9C075 422 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 CNNM2Q9H8M5 875 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 ZNF287Q9HBT7 754 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 MYH8P13535 1937 aa22.72■■□□□ 1.23
KCNMA1-220ENST00000481070 TSPY2A6NKD2 308 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 ORC4O43929 436 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 TBC1D12O60347 775 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 AKR1B1P15121 316 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 NF2P35240 595 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 TFAP4Q01664 338 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 DEFB115Q30KQ5 88 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 MOB2Q70IA6 237 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 ESR2Q92731 530 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 ZKSCAN3Q9BRR0 538 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 ZNF341Q9BYN7 854 aa22.71■■□□□ 1.23
KCNMA1-220ENST00000481070 TSPY3P0CV98 308 aa22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 TSPY8P0CW00 308 aa22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 PSMA5P28066 241 aa22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 TATDN1Q6P1N9 297 aa22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 BLOC1S2Q6QNY1 142 aa22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 MB21D2Q8IYB1 491 aaPredicted RBP22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 LRRC2Q9BYS8 371 aa22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 ZSWIM5Q9P217 1185 aa22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 WDR33Q9C0J8 1336 aaKnown RBP22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 TRPM7Q96QT4 1865 aa22.7■■□□□ 1.22
KCNMA1-220ENST00000481070 USP2O75604 605 aaPredicted RBP22.69■■□□□ 1.22
KCNMA1-220ENST00000481070 PCP11498 1178 aaKnown RBP22.69■■□□□ 1.22
KCNMA1-220ENST00000481070 JAG1P78504 1218 aa22.69■■□□□ 1.22
KCNMA1-220ENST00000481070 MAP3K10Q02779 954 aa22.69■■□□□ 1.22
KCNMA1-220ENST00000481070 WRNIP1Q96S55 665 aa22.69■■□□□ 1.22
KCNMA1-220ENST00000481070 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.69■■□□□ 1.22
KCNMA1-220ENST00000481070 ANGEL1Q9UNK9 670 aaKnown RBP22.69■■□□□ 1.22
KCNMA1-220ENST00000481070 PHF20L1A8MW92 1017 aa22.68■■□□□ 1.22
KCNMA1-220ENST00000481070 PRC1O43663 620 aa22.68■■□□□ 1.22
KCNMA1-220ENST00000481070 NMT2O60551 498 aa22.68■■□□□ 1.22
KCNMA1-220ENST00000481070 CELF2O95319 508 aaKnown RBP22.68■■□□□ 1.22
KCNMA1-220ENST00000481070 INPP5BP32019 993 aa22.68■■□□□ 1.22
KCNMA1-220ENST00000481070 ABCB5Q2M3G0 1257 aa22.68■■□□□ 1.22
KCNMA1-220ENST00000481070 ZSWIM6Q9HCJ5 1215 aa22.68■■□□□ 1.22
KCNMA1-220ENST00000481070 CYP46A1Q9Y6A2 500 aa22.68■■□□□ 1.22
KCNMA1-220ENST00000481070 PPP1R12BO60237 982 aaPredicted RBP22.67■■□□□ 1.22
KCNMA1-220ENST00000481070 GH2P01242 217 aa22.67■■□□□ 1.22
KCNMA1-220ENST00000481070 RPS6KB1P23443 525 aa22.67■■□□□ 1.22
KCNMA1-220ENST00000481070 ANTXR2P58335 489 aa22.67■■□□□ 1.22
KCNMA1-220ENST00000481070 RUFY3Q7L099 469 aa22.67■■□□□ 1.22
KCNMA1-220ENST00000481070 CLEC10AQ8IUN9 316 aa22.67■■□□□ 1.22
KCNMA1-220ENST00000481070 ZKSCAN4Q969J2 545 aaPredicted RBP22.67■■□□□ 1.22
KCNMA1-220ENST00000481070 CASP8AP2Q9UKL3 1982 aa22.67■■□□□ 1.22
KCNMA1-220ENST00000481070 MCM5P33992 734 aa22.66■■□□□ 1.22
KCNMA1-220ENST00000481070 NEK4P51957 841 aa22.66■■□□□ 1.22
KCNMA1-220ENST00000481070 RAB3GAP1Q15042 981 aa22.66■■□□□ 1.22
KCNMA1-220ENST00000481070 DHX32Q7L7V1 743 aaKnown RBP22.66■■□□□ 1.22
KCNMA1-220ENST00000481070 TM6SF1Q9BZW5 370 aa22.66■■□□□ 1.22
KCNMA1-220ENST00000481070 GPHNQ9NQX3 736 aaPredicted RBP22.66■■□□□ 1.22
KCNMA1-220ENST00000481070 HMGB1P09429 215 aaKnown RBP22.65■■□□□ 1.22
KCNMA1-220ENST00000481070 CAP2P40123 477 aa22.65■■□□□ 1.22
KCNMA1-220ENST00000481070 SEPT2Q15019 361 aa22.65■■□□□ 1.22
KCNMA1-220ENST00000481070 CCDC84Q86UT8 332 aaPredicted RBP22.65■■□□□ 1.22
KCNMA1-220ENST00000481070 IL17RAQ96F46 866 aa22.65■■□□□ 1.22
KCNMA1-220ENST00000481070 CCDC17Q96LX7 622 aa22.65■■□□□ 1.22
KCNMA1-220ENST00000481070 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.65■■□□□ 1.22
KCNMA1-220ENST00000481070 CABP5Q9NP86 173 aa22.65■■□□□ 1.22
KCNMA1-220ENST00000481070 PDRG1Q9NUG6 133 aa22.65■■□□□ 1.22
KCNMA1-220ENST00000481070 UBE2Q2LH0YL09 131 aa22.64■■□□□ 1.21
KCNMA1-220ENST00000481070 IFIT3O14879 490 aaKnown RBP22.64■■□□□ 1.21
KCNMA1-220ENST00000481070 IREB2P48200 963 aaKnown RBP22.64■■□□□ 1.21
KCNMA1-220ENST00000481070 FGD1P98174 961 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms