RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 FAM217BQ9NTX9 383 aaPredicted RBP16.27■□□□□ 0.19
NR1H3-220ENST00000481020 RRP15Q9Y3B9 282 aaKnown RBP16.27■□□□□ 0.19
NR1H3-220ENST00000481020 UBR2Q8IWV8 1755 aa16.27■□□□□ 0.19
NR1H3-220ENST00000481020 RANBP6O60518 1105 aaKnown RBP16.26■□□□□ 0.19
NR1H3-220ENST00000481020 PCCAP05165 728 aaPredicted RBP16.26■□□□□ 0.19
NR1H3-220ENST00000481020 TNNT3P45378 269 aaPredicted RBP16.26■□□□□ 0.19
NR1H3-220ENST00000481020 AARSP49588 968 aaKnown RBP eCLIP16.26■□□□□ 0.19
NR1H3-220ENST00000481020 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
NR1H3-220ENST00000481020 TMEM67Q5HYA8 995 aa16.26■□□□□ 0.19
NR1H3-220ENST00000481020 ZNF662Q6ZS27 426 aa16.26■□□□□ 0.19
NR1H3-220ENST00000481020 KRT28Q7Z3Y7 464 aa16.26■□□□□ 0.19
NR1H3-220ENST00000481020 SH3RF1Q7Z6J0 888 aa16.26■□□□□ 0.19
NR1H3-220ENST00000481020 TBC1D10CQ8IV04 446 aa16.26■□□□□ 0.19
NR1H3-220ENST00000481020 FERMT2Q96AC1 680 aa16.26■□□□□ 0.19
NR1H3-220ENST00000481020 TRIM34Q9BYJ4 488 aa16.26■□□□□ 0.19
NR1H3-220ENST00000481020 SERTAD1Q9UHV2 236 aa16.26■□□□□ 0.19
NR1H3-220ENST00000481020 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
NR1H3-220ENST00000481020 SYNRGQ9UMZ2 1314 aa16.26■□□□□ 0.19
NR1H3-220ENST00000481020 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 CYP27B1O15528 508 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 UQCRFS1P1P0C7P4 283 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 GOLGA8FQ08AF8 430 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 GOLGA8DPQ0D2H9 430 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 CUL4BQ13620 913 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
NR1H3-220ENST00000481020 CYP26C1Q6V0L0 522 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 RAD9BQ6WBX8 426 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 DIS3L2Q8IYB7 885 aaKnown RBP16.25■□□□□ 0.19
NR1H3-220ENST00000481020 ANKRD20A12PQ8NF67 263 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 AIFM3Q96NN9 605 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 PDE11AQ9HCR9 933 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 ECM29Q5VYK3 1845 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 C1orf167Q5SNV9 1468 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 TARSL2A2RTX5 802 aaKnown RBP16.25■□□□□ 0.19
NR1H3-220ENST00000481020 SOWAHDA6NJG2 315 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 XBP1P17861 261 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 ATF3P18847 181 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 MAGEA9P43362 315 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 TOB1P50616 345 aaPredicted RBP16.25■□□□□ 0.19
NR1H3-220ENST00000481020 RBL2Q08999 1139 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 CASP8Q14790 479 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 ZNF569Q5MCW4 686 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 MICU3Q86XE3 530 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 RUBCNQ92622 972 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 PHKBQ93100 1093 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 ORAI2Q96SN7 254 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 DESI2Q9BSY9 194 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 TEX13AQ9BXU3 409 aaPredicted RBP16.25■□□□□ 0.19
NR1H3-220ENST00000481020 EPC1Q9H2F5 836 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 STRN4Q9NRL3 753 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 SAMSN1Q9NSI8 373 aaKnown RBP16.25■□□□□ 0.19
NR1H3-220ENST00000481020 VPS18Q9P253 973 aa16.25■□□□□ 0.19
NR1H3-220ENST00000481020 LIMA1Q9UHB6 759 aaKnown RBP16.25■□□□□ 0.19
NR1H3-220ENST00000481020 CDHR2Q9BYE9 1310 aa16.24■□□□□ 0.19
NR1H3-220ENST00000481020 COL18A1P39060 1754 aa16.24■□□□□ 0.19
NR1H3-220ENST00000481020 IFIT5Q13325 482 aaKnown RBP16.24■□□□□ 0.19
NR1H3-220ENST00000481020 SLC9C2Q5TAH2 1124 aa16.24■□□□□ 0.19
NR1H3-220ENST00000481020 EHBP1Q8NDI1 1231 aa16.24■□□□□ 0.19
NR1H3-220ENST00000481020 CCDC148Q8NFR7 591 aa16.24■□□□□ 0.19
NR1H3-220ENST00000481020 ZNF594Q96JF6 807 aaPredicted RBP16.24■□□□□ 0.19
NR1H3-220ENST00000481020 SLC26A6Q9BXS9 759 aa16.24■□□□□ 0.19
NR1H3-220ENST00000481020 PUS3Q9BZE2 481 aaKnown RBP16.24■□□□□ 0.19
NR1H3-220ENST00000481020 PAPPAQ13219 1627 aa16.23■□□□□ 0.19
NR1H3-220ENST00000481020 GNAT2P19087 354 aa16.23■□□□□ 0.19
NR1H3-220ENST00000481020 ADORA1P30542 326 aa16.23■□□□□ 0.19
NR1H3-220ENST00000481020 TCIRG1Q13488 830 aa16.23■□□□□ 0.19
NR1H3-220ENST00000481020 MED15Q96RN5 788 aa16.23■□□□□ 0.19
NR1H3-220ENST00000481020 ABCB6Q9NP58 842 aa16.23■□□□□ 0.19
NR1H3-220ENST00000481020 LZTFL1Q9NQ48 299 aa16.23■□□□□ 0.19
NR1H3-220ENST00000481020 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
NR1H3-220ENST00000481020 BTBD18B2RXH4 712 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 PATL2C9JE40 543 aaKnown RBP16.22■□□□□ 0.19
NR1H3-220ENST00000481020 FOXN1O15353 648 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 ARID4AP29374 1257 aaPredicted RBP16.22■□□□□ 0.19
NR1H3-220ENST00000481020 MCM6Q14566 821 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 RTN1Q16799 776 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 TAF7LQ5H9L4 462 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 TTLL7Q6ZT98 887 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 RIC1Q4ADV7 1423 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 B4E1Z4 1266 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 IFIT3O14879 490 aaKnown RBP16.22■□□□□ 0.19
NR1H3-220ENST00000481020 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 AMPD2Q01433 879 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 CKAP4Q07065 602 aaKnown RBP16.22■□□□□ 0.19
NR1H3-220ENST00000481020 SCARF1Q14162 830 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 TMED8Q6PL24 325 aaPredicted RBP16.22■□□□□ 0.19
NR1H3-220ENST00000481020 CADPS2Q86UW7 1296 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 PPM1EQ8WY54 764 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 STRBPQ96SI9 672 aaKnown RBP16.22■□□□□ 0.19
NR1H3-220ENST00000481020 PNKPQ96T60 521 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 RNF26Q9BY78 433 aaPredicted RBP16.22■□□□□ 0.19
NR1H3-220ENST00000481020 HAUS4Q9H6D7 363 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 YY1AP1Q9H869 796 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 BRMS1Q9HCU9 246 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 MYO6Q9UM54 1294 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 TNS2Q63HR2 1409 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 KCPQ6ZWJ8 1503 aa16.22■□□□□ 0.19
NR1H3-220ENST00000481020 COL22A1Q8NFW1 1626 aaPredicted RBP16.21■□□□□ 0.19
NR1H3-220ENST00000481020 TRIM75PA6NK02 468 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms