RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 REC114Q7Z4M0 266 aa7.84□□□□□ -1.15
UPF3A-205ENST00000479712 THEMISQ8N1K5 641 aaPredicted RBP7.84□□□□□ -1.15
UPF3A-205ENST00000479712 ANAPC16Q96DE5 110 aa7.84□□□□□ -1.15
UPF3A-205ENST00000479712 FERD3LQ96RJ6 166 aa7.84□□□□□ -1.15
UPF3A-205ENST00000479712 CARD10Q9BWT7 1032 aa7.84□□□□□ -1.15
UPF3A-205ENST00000479712 ZC3H12CQ9C0D7 883 aaKnown RBP7.84□□□□□ -1.15
UPF3A-205ENST00000479712 OSBPL2Q9H1P3 480 aa7.84□□□□□ -1.15
UPF3A-205ENST00000479712 OSGEPQ9NPF4 335 aa7.84□□□□□ -1.15
UPF3A-205ENST00000479712 PPT2Q9UMR5 302 aa7.84□□□□□ -1.15
UPF3A-205ENST00000479712 FAM135AQ9P2D6 1515 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 PLEKHD1A6NEE1 506 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 ZNF165P49910 485 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 PTPN11Q06124 597 aaPredicted RBP7.83□□□□□ -1.16
UPF3A-205ENST00000479712 POU4F3Q15319 338 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 GGT6Q6P531 493 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 MPRIPQ6WCQ1 1025 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 ACSBG1Q96GR2 724 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 ZSWIM4Q9H7M6 989 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 BRMS1Q9HCU9 246 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 USP21Q9UK80 565 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 CHD4Q14839 1912 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 ATP7AQ04656 1500 aa7.83□□□□□ -1.16
UPF3A-205ENST00000479712 MLH3Q9UHC1 1453 aa7.82□□□□□ -1.16
UPF3A-205ENST00000479712 KIF14Q15058 1648 aa7.82□□□□□ -1.16
UPF3A-205ENST00000479712 OIP5O43482 229 aa7.82□□□□□ -1.16
UPF3A-205ENST00000479712 AMPD1P23109 780 aa7.82□□□□□ -1.16
UPF3A-205ENST00000479712 RPL6Q02878 288 aaKnown RBP7.82□□□□□ -1.16
UPF3A-205ENST00000479712 NBPF6Q5VWK0 638 aa7.82□□□□□ -1.16
UPF3A-205ENST00000479712 FBXW10Q5XX13 1052 aa7.82□□□□□ -1.16
UPF3A-205ENST00000479712 NOP9Q86U38 636 aaKnown RBP7.82□□□□□ -1.16
UPF3A-205ENST00000479712 FAM177A1Q8N128 213 aaPredicted RBP7.82□□□□□ -1.16
UPF3A-205ENST00000479712 BTBD6Q96KE9 485 aa7.82□□□□□ -1.16
UPF3A-205ENST00000479712 NBPF4Q96M43 638 aa7.82□□□□□ -1.16
UPF3A-205ENST00000479712 NRSN2Q9GZP1 204 aa7.82□□□□□ -1.16
UPF3A-205ENST00000479712 TRPC5Q9UL62 973 aaPredicted RBP7.82□□□□□ -1.16
UPF3A-205ENST00000479712 AHDC1Q5TGY3 1603 aaPredicted RBP7.81□□□□□ -1.16
UPF3A-205ENST00000479712 TIAM1Q13009 1591 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 SHISA8B8ZZ34 492 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 ECEL1O95672 775 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 BCRP11274 1271 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 HSPA6P17066 643 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 MAOBP27338 520 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 HNRNPUQ00839 825 aaKnown RBP eCLIP7.81□□□□□ -1.16
UPF3A-205ENST00000479712 EFCAB2Q5VUJ9 269 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 GIMAP6Q6P9H5 292 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.81□□□□□ -1.16
UPF3A-205ENST00000479712 GK5Q6ZS86 529 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 ANKS3Q6ZW76 656 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 REXO1Q8N1G1 1221 aaKnown RBP7.81□□□□□ -1.16
UPF3A-205ENST00000479712 KLHL23Q8NBE8 558 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 GPBAR1Q8TDU6 330 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 SHDQ96IW2 340 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 PRDM6Q9NQX0 595 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 CACNA2D2Q9NY47 1150 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 PCDHA4Q9UN74 947 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 CTTNBP2Q8WZ74 1663 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 KIDINS220Q9ULH0 1771 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 MSH6P52701 1360 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 NINLQ9Y2I6 1382 aa7.81□□□□□ -1.16
UPF3A-205ENST00000479712 NUP153P49790 1475 aaKnown RBP7.81□□□□□ -1.16
UPF3A-205ENST00000479712 SLURP2P0DP57 97 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 EIF6P56537 245 aaKnown RBP7.8□□□□□ -1.16
UPF3A-205ENST00000479712 PDE3AQ14432 1141 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 KLHDC7BQ96G42 594 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 CRBNQ96SW2 442 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 TRIM55Q9BYV6 548 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 PIF1Q9H611 641 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 CCDC86Q9H6F5 360 aaKnown RBP7.8□□□□□ -1.16
UPF3A-205ENST00000479712 KRT82Q9NSB4 513 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 LRRC4BQ9NT99 713 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 PRKAG3Q9UGI9 489 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 R3HCC1Q9Y3T6 440 aaKnown RBP7.8□□□□□ -1.16
UPF3A-205ENST00000479712 UTRNP46939 3433 aa7.8□□□□□ -1.16
UPF3A-205ENST00000479712 ATRNO75882 1429 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 NLRP12P59046 1061 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 CLCQ05315 142 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 BMS1Q14692 1282 aaKnown RBP7.79□□□□□ -1.16
UPF3A-205ENST00000479712 SETDB1Q15047 1291 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 TNNI3KQ59H18 835 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 MAP4K3Q8IVH8 894 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 DMRTC2Q8IXT2 367 aaPredicted RBP7.79□□□□□ -1.16
UPF3A-205ENST00000479712 HNRNPLLQ8WVV9 542 aaKnown RBP7.79□□□□□ -1.16
UPF3A-205ENST00000479712 USP26Q9BXU7 913 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 ZNRF3Q9ULT6 936 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 POLR3KQ9Y2Y1 108 aaPredicted RBP7.79□□□□□ -1.16
UPF3A-205ENST00000479712 PCDHB14Q9Y5E9 798 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 BRWD3Q6RI45 1802 aa7.79□□□□□ -1.16
UPF3A-205ENST00000479712 MYO5CQ9NQX4 1742 aa7.78□□□□□ -1.16
UPF3A-205ENST00000479712 KLF4O43474 513 aa7.78□□□□□ -1.16
UPF3A-205ENST00000479712 GRIN3BO60391 1043 aa7.78□□□□□ -1.16
UPF3A-205ENST00000479712 IMPDH2P12268 514 aa7.78□□□□□ -1.16
UPF3A-205ENST00000479712 NID1P14543 1247 aa7.78□□□□□ -1.16
UPF3A-205ENST00000479712 GIPRP48546 466 aa7.78□□□□□ -1.16
UPF3A-205ENST00000479712 CDK8P49336 464 aa7.78□□□□□ -1.16
UPF3A-205ENST00000479712 WIPI1Q5MNZ9 446 aaPredicted RBP7.78□□□□□ -1.16
UPF3A-205ENST00000479712 GALNT11Q8NCW6 608 aa7.78□□□□□ -1.16
UPF3A-205ENST00000479712 OR6P1Q8NGX9 317 aa7.78□□□□□ -1.16
UPF3A-205ENST00000479712 UNC13BO14795 1591 aa7.77□□□□□ -1.17
UPF3A-205ENST00000479712 K7ELQ4 463 aaPredicted RBP7.77□□□□□ -1.17
UPF3A-205ENST00000479712 U2SURPO15042 1029 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms