RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 FOXQ1Q9C009 403 aa6.33□□□□□ -1.4
SMARCA1-204ENST00000478420 GINM1Q9NU53 330 aa6.33□□□□□ -1.4
SMARCA1-204ENST00000478420 TJP2Q9UDY2 1190 aa6.33□□□□□ -1.4
SMARCA1-204ENST00000478420 EFR3BQ9Y2G0 817 aa6.33□□□□□ -1.4
SMARCA1-204ENST00000478420 IMPDH2P12268 514 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 ADMP35318 185 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 YARSP54577 528 aaKnown RBP6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 CLCQ05315 142 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 PRAMEF13Q5VWM6 474 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 MFSD2AQ8NA29 543 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 FAM13CQ8NE31 585 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 SEC16BQ96JE7 1060 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 PSMG3-AS1Q96PY0 264 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 FERD3LQ96RJ6 166 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 KLHL3Q9UH77 587 aa6.32□□□□□ -1.4
SMARCA1-204ENST00000478420 K7ELQ4 463 aaPredicted RBP6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 CST3P01034 146 aaPredicted RBP6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 SOX9P48436 509 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 CYP27A1Q02318 531 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 LRRFIP1Q32MZ4 808 aaKnown RBP6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 PRSS36Q5K4E3 855 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 FBXW10Q5XX13 1052 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 OGFOD3Q6PK18 319 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 SHKBP1Q8TBC3 707 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 GATA6Q92908 595 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 TINF2Q9BSI4 451 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 PRDM10Q9NQV6 1147 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 ATG3Q9NT62 314 aa6.31□□□□□ -1.4
SMARCA1-204ENST00000478420 FAM170BA6NMN3 283 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 WDR64B1ANS9 1081 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 F13BP05160 661 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 FAM87AP0C7U9 286 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 ATF4P18848 351 aaPredicted RBP6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 CYP27C1Q4G0S4 372 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 NAALADL2Q58DX5 795 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 DUSP27Q5VZP5 1158 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 SLFN12Q8IYM2 578 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 TOP6BLQ8N6T0 577 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 XAGE3Q8WTP9 111 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 DPH2Q9BQC3 489 aaPredicted RBP6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 METTL22Q9BUU2 404 aaPredicted RBP6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 DUSP23Q9BVJ7 150 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 OSBPL1AQ9BXW6 950 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 GMIPQ9P107 970 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 ZNRF3Q9ULT6 936 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 PPT2Q9UMR5 302 aa6.3□□□□□ -1.4
SMARCA1-204ENST00000478420 SLC22A31A6NKX4 558 aa6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 UPK3BL1B0FP48 263 aa6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 CHURC1-FNTBB4DL54 471 aa6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 UPK3BL2E5RIL1 263 aa6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 ARID5AQ03989 594 aa6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 CPSF6Q16630 551 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 SLC43A3Q8NBI5 491 aa6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 CPLX3Q8WVH0 158 aa6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 CRBNQ96SW2 442 aa6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 MIPEPQ99797 713 aa6.29□□□□□ -1.4
SMARCA1-204ENST00000478420 DNAJA2O60884 412 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 LEFTY1O75610 366 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 SLITRK5O94991 958 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 RAG1P15918 1043 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 DNAJA1P31689 397 aaKnown RBP6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 OVOS1Q6IE37 1185 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 LETMD1Q6P1Q0 360 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 CCDC81Q6ZN84 652 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 ZNF765Q7L2R6 523 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 ZDHHC13Q8IUH4 622 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 PHACTR4Q8IZ21 702 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 SHISA5Q8N114 240 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 CYB5D2Q8WUJ1 264 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 TMEM40Q8WWA1 233 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 SRRTQ9BXP5 876 aaKnown RBP6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 STRIP2Q9ULQ0 834 aa6.28□□□□□ -1.4
SMARCA1-204ENST00000478420 MEIS3P2A8K0S8 358 aa6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 EIF6P56537 245 aaKnown RBP6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 ARSHQ5FYA8 562 aa6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 CDCP2Q5VXM1 449 aa6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 ZNF746Q6NUN9 644 aaPredicted RBP6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 NLRC3Q7RTR2 1065 aa6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 CCDC74BQ96LY2 380 aa6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.27□□□□□ -1.411e-7■□□□□ 10.7
SMARCA1-204ENST00000478420 ANTXR1Q9H6X2 564 aa6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 TPX2Q9ULW0 747 aaKnown RBP6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 LEMD3Q9Y2U8 911 aa6.27□□□□□ -1.41
SMARCA1-204ENST00000478420 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 ADAM23O75077 832 aa6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 SSBP05455 408 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 RANGAP1P46060 587 aaPredicted RBP6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 RBBP8NLQ8NC74 664 aaPredicted RBP6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 RIN3Q8TB24 985 aa6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 ATG4CQ96DT6 458 aa6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 CNNM2Q9H8M5 875 aa6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 PIM2Q9P1W9 311 aa6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 GTF2IRD1Q9UHL9 959 aa6.26□□□□□ -1.41
SMARCA1-204ENST00000478420 RGS13O14921 159 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 EOMESO95936 686 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 CYP7A1P22680 504 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 GBP1P32455 592 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms