RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 TMEM67Q5HYA8 995 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 SFRP5Q5T4F7 317 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 CDKAL1Q5VV42 579 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 SCARA3Q6AZY7 606 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 C22orf34Q6ZV56 151 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 ANKLE2Q86XL3 938 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 HSPA12BQ96MM6 686 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 MIPEPQ99797 713 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 SRCIN1Q9C0H9 1055 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 SEMA3GQ9NS98 782 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 C19orf73Q9NVV2 129 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 PRR33A8MZF0 331 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 SLITRK5O94991 958 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 ZNF865P0CJ78 1059 aaPredicted RBP4.48□□□□□ -1.69
CACUL1-202ENST00000477583 GDNFP39905 211 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 FGD1P98174 961 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 RASIP1Q5U651 963 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 LRFN4Q6PJG9 635 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 C1QL4Q86Z23 238 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 FBXO15Q8NCQ5 510 aaPredicted RBP4.48□□□□□ -1.69
CACUL1-202ENST00000477583 FBF1Q8TES7 1133 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 SETDB2Q96T68 719 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 WWC3Q9ULE0 1092 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 CYP8B1Q9UNU6 501 aa4.48□□□□□ -1.69
CACUL1-202ENST00000477583 H3BS24 57 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 NFIBO00712 420 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 CELA3AP09093 270 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 TAGLNQ01995 201 aaKnown RBP4.47□□□□□ -1.69
CACUL1-202ENST00000477583 EAPPQ56P03 285 aaPredicted RBP4.47□□□□□ -1.69
CACUL1-202ENST00000477583 PCNX4Q63HM2 1172 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 ZNF746Q6NUN9 644 aaPredicted RBP4.47□□□□□ -1.69
CACUL1-202ENST00000477583 LCNL1Q6ZST4 164 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 FBXO33Q7Z6M2 555 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 MFSD2AQ8NA29 543 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 CCDC120Q96HB5 630 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 DIRC2Q96SL1 478 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 NSUN3Q9H649 340 aaKnown RBP4.47□□□□□ -1.69
CACUL1-202ENST00000477583 FBRSQ9HAH7 460 aa4.47□□□□□ -1.69
CACUL1-202ENST00000477583 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 LDHBP07195 334 aaKnown RBP4.46□□□□□ -1.7
CACUL1-202ENST00000477583 C1QTNF9P0C862 333 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 ZSCAN22P10073 491 aaPredicted RBP4.46□□□□□ -1.7
CACUL1-202ENST00000477583 ETF1P62495 437 aaKnown RBP4.46□□□□□ -1.7
CACUL1-202ENST00000477583 SLBPQ14493 270 aaKnown RBP eCLIP4.46□□□□□ -1.7
CACUL1-202ENST00000477583 INPP5AQ14642 412 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 HDXQ7Z353 690 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 THAP5Q7Z6K1 395 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 SIAH1Q8IUQ4 282 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 ANKRD24Q8TF21 1146 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 PLPPR2Q96GM1 343 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 ALPK1Q96QP1 1244 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 BCL2L13Q9BXK5 485 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 OSBPL7Q9BZF2 842 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 ST14Q9Y5Y6 855 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 CAPN6Q9Y6Q1 641 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 CNTNAP4Q9C0A0 1308 aa4.46□□□□□ -1.7
CACUL1-202ENST00000477583 CBX7O95931 251 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 KRT1P04264 644 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 RAC2P15153 192 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 CAP2P40123 477 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 ATP2B2Q01814 1243 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 NKG7Q16617 165 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 ALG1LQ6GMV1 187 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 LETMD1Q6P1Q0 360 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 GIPC2Q8TF65 315 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 GAL3ST3Q96A11 431 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 WNT10AQ9GZT5 417 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 RNF19AQ9NV58 838 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 SLAMF8Q9P0V8 285 aa4.45□□□□□ -1.7
CACUL1-202ENST00000477583 GIPC1O14908 333 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 PRPF40AO75400 957 aaKnown RBP4.44□□□□□ -1.7
CACUL1-202ENST00000477583 TMEM253P0C7T8 217 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 PTPN11Q06124 597 aaPredicted RBP4.44□□□□□ -1.7
CACUL1-202ENST00000477583 WIPI1Q5MNZ9 446 aaPredicted RBP4.44□□□□□ -1.7
CACUL1-202ENST00000477583 LILRA6Q6PI73 481 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 HID1Q8IV36 788 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 RIN3Q8TB24 985 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 UBE2FQ969M7 185 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 COX4I2Q96KJ9 171 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 EPB41L4BQ9H329 900 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 DCP1AQ9NPI6 582 aaPredicted RBP4.44□□□□□ -1.7
CACUL1-202ENST00000477583 ZSWIM5Q9P217 1185 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 SPG7Q9UQ90 795 aa4.44□□□□□ -1.7
CACUL1-202ENST00000477583 RBM47A0AV96 593 aaKnown RBP4.43□□□□□ -1.7
CACUL1-202ENST00000477583 NPIPB6E9PJ23 425 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 CST3P01034 146 aaPredicted RBP4.43□□□□□ -1.7
CACUL1-202ENST00000477583 USP17L7P0C7H9 530 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 ZNF16P17020 682 aaPredicted RBP4.43□□□□□ -1.7
CACUL1-202ENST00000477583 CYP7A1P22680 504 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 KIR3DL1P43629 444 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 PRAMEF13Q5VWM6 474 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.43□□□□□ -1.7
CACUL1-202ENST00000477583 ABHD4Q8TB40 342 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 XAGE3Q8WTP9 111 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 DUSP9Q99956 384 aaKnown RBP4.43□□□□□ -1.7
CACUL1-202ENST00000477583 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 C12orf49Q9H741 205 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 FAM8A1Q9UBU6 413 aa4.43□□□□□ -1.7
CACUL1-202ENST00000477583 TTF2Q9UNY4 1162 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms