RNA–Protein interactions for RNA: ENST00000477325.1

RPSA-206, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-206ENST00000477325 MUC6Q6W4X9 2439 aa11.83□□□□□ -0.52
RPSA-206ENST00000477325 MYO9BQ13459 2157 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 USP34Q70CQ2 3546 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 TRIM43BA6NCK2 446 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 IGHA2P01877 340 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 EPHB4P54760 987 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 SNX17Q15036 470 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 SH3RF1Q7Z6J0 888 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 ZNF280CQ8ND82 737 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 LPAR1Q92633 364 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 TRIM43Q96BQ3 446 aaPredicted RBP11.82□□□□□ -0.52
RPSA-206ENST00000477325 SUCLG2Q96I99 432 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 UHRF1Q96T88 793 aaPredicted RBP11.82□□□□□ -0.52
RPSA-206ENST00000477325 PORCNQ9H237 461 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 PDLIM7Q9NR12 457 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 FLRT1Q9NZU1 646 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 PRKAG2Q9UGJ0 569 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 GAKO14976 1311 aa11.82□□□□□ -0.52
RPSA-206ENST00000477325 DNM1LO00429 736 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 ANP32CO43423 234 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 TBC1D12O60347 775 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 ITGB8P26012 769 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 PABPC4Q13310 644 aaKnown RBP eCLIP11.81□□□□□ -0.52not detected■■■■■ 40.5
RPSA-206ENST00000477325 RRP1BQ14684 758 aaKnown RBP11.81□□□□□ -0.52
RPSA-206ENST00000477325 Q3C1V9 767 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 RABL6Q3YEC7 729 aaPredicted RBP11.81□□□□□ -0.52
RPSA-206ENST00000477325 METTL24Q5JXM2 366 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 P2RX7Q99572 595 aaKnown RBP11.81□□□□□ -0.52
RPSA-206ENST00000477325 APBA2Q99767 749 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 THEGQ9P2T0 379 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 RBPJLQ9UBG7 517 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 ATP11BQ9Y2G3 1177 aa11.81□□□□□ -0.52
RPSA-206ENST00000477325 TCF20Q9UGU0 1960 aaKnown RBP11.81□□□□□ -0.52
RPSA-206ENST00000477325 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
RPSA-206ENST00000477325 DNAJB2P25686 324 aa11.8□□□□□ -0.52
RPSA-206ENST00000477325 MAPK4P31152 587 aa11.8□□□□□ -0.52
RPSA-206ENST00000477325 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
RPSA-206ENST00000477325 RGS2P41220 211 aa11.8□□□□□ -0.52
RPSA-206ENST00000477325 SLC39A5Q6ZMH5 540 aa11.8□□□□□ -0.52
RPSA-206ENST00000477325 GPR142Q7Z601 462 aa11.8□□□□□ -0.52
RPSA-206ENST00000477325 TRPV1Q8NER1 839 aa11.8□□□□□ -0.52
RPSA-206ENST00000477325 GPRC5AQ8NFJ5 357 aa11.8□□□□□ -0.52
RPSA-206ENST00000477325 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
RPSA-206ENST00000477325 SALL1Q9NSC2 1324 aa11.8□□□□□ -0.52
RPSA-206ENST00000477325 HERVK_113P62684 666 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 MRPS5P82675 430 aaKnown RBP11.79□□□□□ -0.52
RPSA-206ENST00000477325 PUM3Q15397 648 aaKnown RBP11.79□□□□□ -0.52
RPSA-206ENST00000477325 TRIM60Q495X7 471 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 AKNAD1Q5T1N1 836 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 ZSCAN29Q8IWY8 852 aaPredicted RBP11.79□□□□□ -0.52
RPSA-206ENST00000477325 ANKRD44Q8N8A2 993 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 C1QTNF1Q9BXJ1 281 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 TBC1D2Q9BYX2 928 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 OSBPL5Q9H0X9 879 aaPredicted RBP11.79□□□□□ -0.52
RPSA-206ENST00000477325 ZNF576Q9H609 170 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 UTYO14607 1347 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 SIPA1L1O43166 1804 aa11.79□□□□□ -0.52
RPSA-206ENST00000477325 LDHBP07195 334 aaKnown RBP11.78□□□□□ -0.52
RPSA-206ENST00000477325 IFIT1P09914 478 aaKnown RBP11.78□□□□□ -0.52
RPSA-206ENST00000477325 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
RPSA-206ENST00000477325 ERVK-9P63128 1117 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 ERVK-24P63145 666 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 MAP2K5Q13163 448 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 CCDC184Q52MB2 194 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 C1orf53Q5VUE5 145 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 KLHDC4Q8TBB5 520 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 RNPC3Q96LT9 517 aaKnown RBP11.78□□□□□ -0.52
RPSA-206ENST00000477325 NECAB3Q96P71 396 aaPredicted RBP11.78□□□□□ -0.52
RPSA-206ENST00000477325 LRFN3Q9BTN0 628 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 PRDM5Q9NQX1 630 aaPredicted RBP11.78□□□□□ -0.52
RPSA-206ENST00000477325 METRNQ9UJH8 293 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 CFAP54Q96N23 3096 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 TRIOO75962 3097 aa11.78□□□□□ -0.52
RPSA-206ENST00000477325 PLXNA1Q9UIW2 1896 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 MSCO60682 206 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 VAMP4O75379 141 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 ALDH1L1O75891 902 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 BMP1P13497 986 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 TIE1P35590 1138 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 CAP2P40123 477 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 ADGRE1Q14246 886 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 GSE1Q14687 1217 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 GJC2Q5T442 439 aaPredicted RBP11.77□□□□□ -0.53
RPSA-206ENST00000477325 PLEKHH3Q7Z736 793 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
RPSA-206ENST00000477325 WDR18Q9BV38 432 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 BICC1Q9H694 974 aaKnown RBP11.77□□□□□ -0.53
RPSA-206ENST00000477325 MRS2Q9HD23 443 aa11.77□□□□□ -0.53
RPSA-206ENST00000477325 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.53
RPSA-206ENST00000477325 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.76□□□□□ -0.53
RPSA-206ENST00000477325 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.76□□□□□ -0.53
RPSA-206ENST00000477325 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
RPSA-206ENST00000477325 HOXC6P09630 235 aa11.76□□□□□ -0.53
RPSA-206ENST00000477325 RHBDL3P58872 404 aa11.76□□□□□ -0.53
RPSA-206ENST00000477325 IRX3P78415 501 aaPredicted RBP11.76□□□□□ -0.53
RPSA-206ENST00000477325 JAG1P78504 1218 aa11.76□□□□□ -0.53
RPSA-206ENST00000477325 PPM1EQ8WY54 764 aa11.76□□□□□ -0.53
RPSA-206ENST00000477325 EDC3Q96F86 508 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms