RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 C16orf86Q6ZW13 317 aa21.27■■□□□ 1
SMIM4-202ENST00000476842 ZNF589Q86UQ0 364 aaPredicted RBP21.27■■□□□ 1
SMIM4-202ENST00000476842 TBC1D2Q9BYX2 928 aa21.27■■□□□ 1
SMIM4-202ENST00000476842 NAPBQ9H115 298 aa21.27■■□□□ 1
SMIM4-202ENST00000476842 CCDC171Q6TFL3 1326 aa21.27■□□□□ 0.99
SMIM4-202ENST00000476842 USP17L5A8MUK1 530 aa21.26■□□□□ 0.99
SMIM4-202ENST00000476842 MINDY4BA8MYZ0 360 aa21.26■□□□□ 0.99
SMIM4-202ENST00000476842 SMIM22K7EJ46 135 aa21.26■□□□□ 0.99
SMIM4-202ENST00000476842 GDF11O95390 407 aa21.26■□□□□ 0.99
SMIM4-202ENST00000476842 CETPP11597 493 aa21.26■□□□□ 0.99
SMIM4-202ENST00000476842 CHMLP26374 656 aa21.26■□□□□ 0.99
SMIM4-202ENST00000476842 CDK8P49336 464 aa21.26■□□□□ 0.99
SMIM4-202ENST00000476842 RNF186Q9NXI6 227 aa21.26■□□□□ 0.99
SMIM4-202ENST00000476842 OTOFQ9HC10 1997 aa21.26■□□□□ 0.99
SMIM4-202ENST00000476842 SIPA1L1O43166 1804 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 CCL15-CCL14A0A0B4J2E2 113 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 HSPD1P10809 573 aaKnown RBP21.25■□□□□ 0.99
SMIM4-202ENST00000476842 CCL15Q16663 113 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 BMP2KLQ5H9B9 411 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 IFNL1Q8IU54 200 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 BRI3BPQ8WY22 251 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 PTPN18Q99952 460 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 CABP5Q9NP86 173 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 SAGE1Q9NXZ1 904 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.25■□□□□ 0.99
SMIM4-202ENST00000476842 ZBTB21Q9ULJ3 1066 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 MYH1P12882 1939 aa21.25■□□□□ 0.99
SMIM4-202ENST00000476842 DDX60LQ5H9U9 1706 aaKnown RBP21.24■□□□□ 0.99
SMIM4-202ENST00000476842 FOXN1O15353 648 aa21.24■□□□□ 0.99
SMIM4-202ENST00000476842 GH2P01242 217 aa21.24■□□□□ 0.99
SMIM4-202ENST00000476842 ABCB5Q2M3G0 1257 aa21.24■□□□□ 0.99
SMIM4-202ENST00000476842 OTUD7BQ6GQQ9 843 aa21.24■□□□□ 0.99
SMIM4-202ENST00000476842 CCDC84Q86UT8 332 aaPredicted RBP21.24■□□□□ 0.99
SMIM4-202ENST00000476842 SLC44A5Q8NCS7 719 aa21.24■□□□□ 0.99
SMIM4-202ENST00000476842 ZNF280CQ8ND82 737 aa21.24■□□□□ 0.99
SMIM4-202ENST00000476842 RUFY2Q8WXA3 655 aa21.24■□□□□ 0.99
SMIM4-202ENST00000476842 WDR18Q9BV38 432 aa21.24■□□□□ 0.99
SMIM4-202ENST00000476842 AS3MTQ9HBK9 375 aa21.24■□□□□ 0.99
SMIM4-202ENST00000476842 IGF2BP3O00425 579 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMIM4-202ENST00000476842 TRPA1O75762 1119 aa21.23■□□□□ 0.99
SMIM4-202ENST00000476842 ALDH1A1P00352 501 aa21.23■□□□□ 0.99
SMIM4-202ENST00000476842 FGAP02671 866 aa21.23■□□□□ 0.99
SMIM4-202ENST00000476842 SHROOM1Q2M3G4 852 aaPredicted RBP21.23■□□□□ 0.99
SMIM4-202ENST00000476842 CCDC17Q96LX7 622 aa21.23■□□□□ 0.99
SMIM4-202ENST00000476842 A0A0G2JLL6 359 aaPredicted RBP21.22■□□□□ 0.99
SMIM4-202ENST00000476842 PPARAQ07869 468 aa21.22■□□□□ 0.99
SMIM4-202ENST00000476842 SPP2Q13103 211 aa21.22■□□□□ 0.99
SMIM4-202ENST00000476842 MOGSQ13724 837 aa21.22■□□□□ 0.99
SMIM4-202ENST00000476842 PRRT2Q7Z6L0 340 aaPredicted RBP21.22■□□□□ 0.99
SMIM4-202ENST00000476842 NAV1Q8NEY1 1877 aa21.22■□□□□ 0.99
SMIM4-202ENST00000476842 ROBO3Q96MS0 1386 aa21.22■□□□□ 0.99
SMIM4-202ENST00000476842 TRIM75PA6NK02 468 aa21.21■□□□□ 0.99
SMIM4-202ENST00000476842 CTCFP49711 727 aaPredicted RBP21.21■□□□□ 0.99
SMIM4-202ENST00000476842 FASTKD5Q7L8L6 764 aaKnown RBP21.21■□□□□ 0.99
SMIM4-202ENST00000476842 CFHR5Q9BXR6 569 aa21.21■□□□□ 0.99
SMIM4-202ENST00000476842 MKNK2Q9HBH9 465 aa21.21■□□□□ 0.99
SMIM4-202ENST00000476842 ZNF287Q9HBT7 754 aa21.21■□□□□ 0.99
SMIM4-202ENST00000476842 ANAPC4Q9UJX5 808 aa21.21■□□□□ 0.99
SMIM4-202ENST00000476842 ZMYM6O95789 1325 aa21.21■□□□□ 0.99
SMIM4-202ENST00000476842 RAD50Q92878 1312 aa21.21■□□□□ 0.99
SMIM4-202ENST00000476842 BTBD19C9JJ37 291 aa21.2■□□□□ 0.98
SMIM4-202ENST00000476842 SLC3A2P08195 630 aaKnown RBP21.2■□□□□ 0.98
SMIM4-202ENST00000476842 GUCY1A2P33402 732 aa21.2■□□□□ 0.98
SMIM4-202ENST00000476842 RAB3GAP1Q15042 981 aa21.2■□□□□ 0.98
SMIM4-202ENST00000476842 DSCC1Q9BVC3 393 aa21.2■□□□□ 0.98
SMIM4-202ENST00000476842 IL25Q9H293 177 aa21.2■□□□□ 0.98
SMIM4-202ENST00000476842 ZCCHC17Q9NP64 241 aaKnown RBP21.2■□□□□ 0.98
SMIM4-202ENST00000476842 MPHOSPH10O00566 681 aaKnown RBP21.19■□□□□ 0.98
SMIM4-202ENST00000476842 AKR1B1P15121 316 aa21.19■□□□□ 0.98
SMIM4-202ENST00000476842 BACE1P56817 501 aa21.19■□□□□ 0.98
SMIM4-202ENST00000476842 PDE4BQ07343 736 aa21.19■□□□□ 0.98
SMIM4-202ENST00000476842 SH3D19Q5HYK7 790 aa21.19■□□□□ 0.98
SMIM4-202ENST00000476842 TMEM179Q6ZVK1 233 aa21.19■□□□□ 0.98
SMIM4-202ENST00000476842 ANKRD23Q86SG2 305 aa21.19■□□□□ 0.98
SMIM4-202ENST00000476842 STK11IPQ8N1F8 1099 aa21.19■□□□□ 0.98
SMIM4-202ENST00000476842 FAM43AQ8N2R8 423 aa21.19■□□□□ 0.98
SMIM4-202ENST00000476842 C19orf81C9J6K1 198 aa21.18■□□□□ 0.98
SMIM4-202ENST00000476842 USP17L10C9JJH3 530 aa21.18■□□□□ 0.98
SMIM4-202ENST00000476842 SGSM2O43147 1006 aa21.18■□□□□ 0.98
SMIM4-202ENST00000476842 HSPA8P11142 646 aaKnown RBP21.18■□□□□ 0.98
SMIM4-202ENST00000476842 RASA1P20936 1047 aa21.18■□□□□ 0.98
SMIM4-202ENST00000476842 SEPT2Q15019 361 aa21.18■□□□□ 0.98
SMIM4-202ENST00000476842 GPAT2Q6NUI2 795 aa21.18■□□□□ 0.98
SMIM4-202ENST00000476842 ZNF444Q8N0Y2 327 aaPredicted RBP21.18■□□□□ 0.98
SMIM4-202ENST00000476842 TBC1D8O95759 1140 aa21.17■□□□□ 0.98
SMIM4-202ENST00000476842 TSKSQ9UJT2 592 aa21.17■□□□□ 0.98
SMIM4-202ENST00000476842 BAZ2AQ9UIF9 1905 aaKnown RBP21.17■□□□□ 0.98
SMIM4-202ENST00000476842 DOCK1Q14185 1865 aa21.16■□□□□ 0.98
SMIM4-202ENST00000476842 FGRP09769 529 aa21.16■□□□□ 0.98
SMIM4-202ENST00000476842 CTDSPL2Q05D32 466 aa21.16■□□□□ 0.98
SMIM4-202ENST00000476842 GADL1Q6ZQY3 521 aa21.16■□□□□ 0.98
SMIM4-202ENST00000476842 PROCA1Q8NCQ7 364 aaPredicted RBP21.16■□□□□ 0.98
SMIM4-202ENST00000476842 PDHXO00330 501 aa21.15■□□□□ 0.98
SMIM4-202ENST00000476842 PRDM1O75626 825 aa21.15■□□□□ 0.98
SMIM4-202ENST00000476842 LBX1P52954 281 aa21.15■□□□□ 0.98
SMIM4-202ENST00000476842 HMGCS2P54868 508 aa21.15■□□□□ 0.98
SMIM4-202ENST00000476842 MTMR2Q13614 643 aa21.15■□□□□ 0.98
SMIM4-202ENST00000476842 SIAH1Q8IUQ4 282 aa21.15■□□□□ 0.98
SMIM4-202ENST00000476842 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMIM4-202ENST00000476842 KANSL2Q9H9L4 492 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms