RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 MAGEC3Q8TD91 643 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 GIPC2Q8TF65 315 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 CTNNBL1Q8WYA6 563 aaPredicted RBP4.34□□□□□ -1.71
LSM2-211ENST00000475835 SPOCK2Q92563 424 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 SNX21Q969T3 373 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 RELTQ969Z4 430 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 RBM41Q96IZ5 413 aaKnown RBP4.34□□□□□ -1.71
LSM2-211ENST00000475835 TMEM87BQ96K49 555 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 TBC1D2Q9BYX2 928 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.34□□□□□ -1.71
LSM2-211ENST00000475835 NACAP1Q9BZK3 213 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 CCDC113Q9H0I3 377 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 ABCG4Q9H172 646 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 CNNM2Q9H8M5 875 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 TMEM165Q9HC07 324 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 PCDH18Q9HCL0 1135 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 PCDH12Q9NPG4 1184 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 DDX56Q9NY93 547 aaKnown RBP4.34□□□□□ -1.71
LSM2-211ENST00000475835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.34□□□□□ -1.71
LSM2-211ENST00000475835 TBK1Q9UHD2 729 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 CIDEBQ9UHD4 219 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 FBXO2Q9UK22 296 aaPredicted RBP4.34□□□□□ -1.71
LSM2-211ENST00000475835 ZNF510Q9Y2H8 683 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 RABGAP1Q9Y3P9 1069 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 PRKAB1Q9Y478 270 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 PCDHGB3Q9Y5G1 929 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 PTPRCP08575 1304 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 PLEKHH1Q9ULM0 1364 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 UHRF1BP1Q6BDS2 1440 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 ZMYM4Q5VZL5 1548 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 DISP1Q96F81 1524 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 KIAA0586Q9BVV6 1533 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 ARHGEF5Q12774 1597 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 PREX2Q70Z35 1606 aa4.34□□□□□ -1.71
LSM2-211ENST00000475835 RNF17Q9BXT8 1623 aaKnown RBP4.34□□□□□ -1.71
LSM2-211ENST00000475835 UNC13BO14795 1591 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 GRIN2AQ12879 1464 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 IFT140Q96RY7 1462 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 C9orf84Q5VXU9 1444 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 ANKRD50Q9ULJ7 1429 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 LRPPRCP42704 1394 aaKnown RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 ATAD2Q6PL18 1390 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 SPDYE3A6NKU9 549 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 ENO4A6NNW6 628 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CASQ2O14958 399 aaPredicted RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 SKAP2O75563 359 aaPredicted RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 B3GALNT1O75752 331 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 YEATS4O95619 227 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 PENKP01210 267 aaPredicted RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 GYS1P13807 737 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 ATP5JP18859 108 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 GNAT2P19087 354 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 WEE1P30291 646 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CSTF2P33240 577 aaKnown RBP eCLIP4.33□□□□□ -1.72
LSM2-211ENST00000475835 HSPA4P34932 840 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CA8P35219 290 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 KIF11P52732 1056 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 UBASH3AP57075 661 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 SNX16P57768 344 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 ITIH3Q06033 890 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 STK3Q13188 491 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 STIM1Q13586 685 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CUL3Q13618 768 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 SIM2Q14190 667 aaPredicted RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 BTG3Q14201 252 aaPredicted RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 TCEAL1Q15170 157 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 SF3B3Q15393 1217 aaKnown RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 KLHL40Q2TBA0 621 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CREB3L3Q68CJ9 461 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 ALKBH2Q6NS38 261 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 MCM10Q7L590 875 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 BPHLQ86WA6 291 aaPredicted RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 CCDC50Q8IVM0 306 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CEP57L1Q8IYX8 460 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CARNMT1Q8N4J0 409 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CRACR2BQ8N4Y2 399 aaPredicted RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 RNF10Q8N5U6 811 aaKnown RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 ESX1Q8N693 406 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 LINC00469Q8N7U9 141 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CUL5Q93034 780 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 ASIC4Q96FT7 647 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 CEP95Q96GE4 821 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 NLRP3Q96P20 1036 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 MOGAT1Q96PD6 335 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 APBA2Q99767 749 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.33□□□□□ -1.72
LSM2-211ENST00000475835 CARD11Q9BXL7 1154 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 UPF3BQ9BZI7 483 aaKnown RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 VPS33BQ9H267 617 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 SEMA4AQ9H3S1 761 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 DNAAF2Q9NVR5 837 aaKnown RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 BIN2Q9UBW5 565 aaPredicted RBP4.33□□□□□ -1.72
LSM2-211ENST00000475835 STK39Q9UEW8 545 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 TUBGCP4Q9UGJ1 667 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 MTUS1Q9ULD2 1270 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 ZNF148Q9UQR1 794 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 DAAM1Q9Y4D1 1078 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 SPO11Q9Y5K1 396 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 MRFAP1Q9Y605 127 aa4.33□□□□□ -1.72
LSM2-211ENST00000475835 PRDM15P57071 1507 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms