RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CDK5RAP2Q96SN8 1893 aa11.89□□□□□ -0.51
MCF2L-223ENST00000473345 CYP2E1P05181 493 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-223ENST00000473345 HOXA7P31268 230 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-223ENST00000473345 DYNLL1P63167 89 aaKnown RBP11.89□□□□□ -0.51
MCF2L-223ENST00000473345 TGFBRAP1Q8WUH2 860 aa11.89□□□□□ -0.51
MCF2L-223ENST00000473345 DBNDD2Q9BQY9 259 aa11.89□□□□□ -0.51
MCF2L-223ENST00000473345 PIH1D3Q9NQM4 214 aaKnown RBP11.89□□□□□ -0.51
MCF2L-223ENST00000473345 RAI14Q9P0K7 980 aa11.89□□□□□ -0.51
MCF2L-223ENST00000473345 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
MCF2L-223ENST00000473345 GPR142Q7Z601 462 aa11.88□□□□□ -0.51
MCF2L-223ENST00000473345 SLF2Q8IX21 1173 aa11.88□□□□□ -0.51
MCF2L-223ENST00000473345 TDHQ8IZJ6 230 aa11.88□□□□□ -0.51
MCF2L-223ENST00000473345 TRPV1Q8NER1 839 aa11.88□□□□□ -0.51
MCF2L-223ENST00000473345 GUCD1Q96NT3 240 aa11.88□□□□□ -0.51
MCF2L-223ENST00000473345 API5Q9BZZ5 524 aaKnown RBP11.88□□□□□ -0.51
MCF2L-223ENST00000473345 TLR7Q9NYK1 1049 aaKnown RBP11.88□□□□□ -0.51
MCF2L-223ENST00000473345 SAP30BPQ9UHR5 308 aaKnown RBP11.88□□□□□ -0.51
MCF2L-223ENST00000473345 ZBTB21Q9ULJ3 1066 aa11.88□□□□□ -0.51
MCF2L-223ENST00000473345 MYO5AQ9Y4I1 1855 aaKnown RBP11.88□□□□□ -0.51
MCF2L-223ENST00000473345 A0A0C4DFX4 3053 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 IGHA2P01877 340 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 TRIM27P14373 513 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 PPP4CP60510 307 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 ERVK-9P63128 1117 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 ERVK-24P63145 666 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 PAGR1Q9BTK6 254 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 PI4KBQ9UBF8 816 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 HERC5Q9UII4 1024 aaKnown RBP11.87□□□□□ -0.51
MCF2L-223ENST00000473345 AKAP2Q9Y2D5 859 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 STXBP5LQ9Y2K9 1186 aa11.87□□□□□ -0.51
MCF2L-223ENST00000473345 BCAR3O75815 825 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 LDHCP07864 332 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 XRCC5P13010 732 aaKnown RBP11.86□□□□□ -0.51
MCF2L-223ENST00000473345 ZAP70P43403 619 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 IRX3P78415 501 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-223ENST00000473345 GSTO1P78417 241 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 GPRC5AQ8NFJ5 357 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 NPLOC4Q8TAT6 608 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 ACER1Q8TDN7 264 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 NUDT12Q9BQG2 462 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 COL25A1Q9BXS0 654 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-223ENST00000473345 UBE2OQ9C0C9 1292 aaKnown RBP11.86□□□□□ -0.51
MCF2L-223ENST00000473345 BTBD7Q9P203 1132 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 MAST2Q6P0Q8 1798 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 FRMPD3Q5JV73 1810 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 FOCADQ5VW36 1801 aa11.86□□□□□ -0.51
MCF2L-223ENST00000473345 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
MCF2L-223ENST00000473345 MAP4K4O95819 1239 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-223ENST00000473345 GH2P01242 217 aa11.85□□□□□ -0.51
MCF2L-223ENST00000473345 GUCY1A2P33402 732 aa11.85□□□□□ -0.51
MCF2L-223ENST00000473345 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.51
MCF2L-223ENST00000473345 POLA2Q14181 598 aa11.85□□□□□ -0.51
MCF2L-223ENST00000473345 ZYXQ15942 572 aaKnown RBP11.85□□□□□ -0.51
MCF2L-223ENST00000473345 NAA16Q6N069 864 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-223ENST00000473345 TBC1D2Q9BYX2 928 aa11.85□□□□□ -0.51
MCF2L-223ENST00000473345 LRP2BPQ9P2M1 347 aa11.85□□□□□ -0.51
MCF2L-223ENST00000473345 USP17L10C9JJH3 530 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 ASNSP08243 561 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 GNAI3P08754 354 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 ZKSCAN1P17029 563 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-223ENST00000473345 CAPN2P17655 700 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 SOCS4Q8WXH5 440 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 CLUAP1Q96AJ1 413 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 FAM161BQ96MY7 647 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 ANTXR1Q9H6X2 564 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 C1orf115Q9H7X2 142 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 AS3MTQ9HBK9 375 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 TMOD4Q9NZQ9 345 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 DBNLQ9UJU6 430 aaKnown RBP11.84□□□□□ -0.51
MCF2L-223ENST00000473345 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
MCF2L-223ENST00000473345 UNC80Q8N2C7 3258 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 C19orf81C9J6K1 198 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 SMIM22K7EJ46 135 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 MAPK4P31152 587 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 CYP2C19P33261 490 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 MAP2K5Q13163 448 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 GORABQ5T7V8 394 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 TATDN1Q6P1N9 297 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 PLEKHH3Q7Z736 793 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 MIGA1Q8NAN2 632 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 ARHGAP45Q92619 1136 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 C12orf42Q96LP6 360 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 APBA2Q99767 749 aa11.83□□□□□ -0.52
MCF2L-223ENST00000473345 DHX36Q9H2U1 1008 aaKnown RBP11.83□□□□□ -0.52
MCF2L-223ENST00000473345 LTBP2Q14767 1821 aa11.82□□□□□ -0.52
MCF2L-223ENST00000473345 GNAI2P04899 355 aa11.82□□□□□ -0.52
MCF2L-223ENST00000473345 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-223ENST00000473345 UQCRFS1P1P0C7P4 283 aa11.82□□□□□ -0.52
MCF2L-223ENST00000473345 SHMT1P34896 483 aa11.82□□□□□ -0.52
MCF2L-223ENST00000473345 RGS2P41220 211 aa11.82□□□□□ -0.52
MCF2L-223ENST00000473345 PLCD1P51178 756 aa11.82□□□□□ -0.52
MCF2L-223ENST00000473345 ATN1P54259 1190 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-223ENST00000473345 ANO1Q5XXA6 986 aa11.82□□□□□ -0.52
MCF2L-223ENST00000473345 FOXP4Q8IVH2 680 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-223ENST00000473345 TMEM57Q8N5G2 664 aa11.82□□□□□ -0.52
MCF2L-223ENST00000473345 EAF2Q96CJ1 260 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-223ENST00000473345 SENP6Q9GZR1 1112 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms