RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 PRAMEF27A3QJZ7 478 aa7.15□□□□□ -1.26
SCFD1-205ENST00000469043 BRD1O95696 1058 aa7.15□□□□□ -1.26
SCFD1-205ENST00000469043 ATP2B2Q01814 1243 aa7.15□□□□□ -1.26
SCFD1-205ENST00000469043 CDKAL1Q5VV42 579 aa7.15□□□□□ -1.26
SCFD1-205ENST00000469043 FYB2Q5VWT5 728 aa7.15□□□□□ -1.26
SCFD1-205ENST00000469043 PCNX4Q63HM2 1172 aa7.15□□□□□ -1.26
SCFD1-205ENST00000469043 ZNF746Q6NUN9 644 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-205ENST00000469043 SPOCD1Q6ZMY3 1216 aa7.15□□□□□ -1.26
SCFD1-205ENST00000469043 MFSD4AQ8N468 514 aa7.15□□□□□ -1.26
SCFD1-205ENST00000469043 ZSCAN18Q8TBC5 510 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-205ENST00000469043 SEMA3GQ9NS98 782 aa7.15□□□□□ -1.26
SCFD1-205ENST00000469043 PATL2C9JE40 543 aaKnown RBP7.14□□□□□ -1.27
SCFD1-205ENST00000469043 GDNFP39905 211 aa7.14□□□□□ -1.27
SCFD1-205ENST00000469043 INPP5AQ14642 412 aa7.14□□□□□ -1.27
SCFD1-205ENST00000469043 C22orf34Q6ZV56 151 aa7.14□□□□□ -1.27
SCFD1-205ENST00000469043 ANKLE2Q86XL3 938 aa7.14□□□□□ -1.27
SCFD1-205ENST00000469043 MIPEPQ99797 713 aa7.14□□□□□ -1.27
SCFD1-205ENST00000469043 WNT10AQ9GZT5 417 aa7.14□□□□□ -1.27
SCFD1-205ENST00000469043 ATP13A1Q9HD20 1204 aa7.14□□□□□ -1.27
SCFD1-205ENST00000469043 SNCAIPQ9Y6H5 919 aa7.14□□□□□ -1.27
SCFD1-205ENST00000469043 ZNF865P0CJ78 1059 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-205ENST00000469043 CAP2P40123 477 aa7.13□□□□□ -1.27
SCFD1-205ENST00000469043 ETF1P62495 437 aaKnown RBP7.13□□□□□ -1.27
SCFD1-205ENST00000469043 FGD1P98174 961 aa7.13□□□□□ -1.27
SCFD1-205ENST00000469043 RASIP1Q5U651 963 aa7.13□□□□□ -1.27
SCFD1-205ENST00000469043 LRFN4Q6PJG9 635 aa7.13□□□□□ -1.27
SCFD1-205ENST00000469043 SYDE1Q6ZW31 735 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-205ENST00000469043 HID1Q8IV36 788 aa7.13□□□□□ -1.27
SCFD1-205ENST00000469043 PLPPR2Q96GM1 343 aa7.13□□□□□ -1.27
SCFD1-205ENST00000469043 FAM8A1Q9UBU6 413 aa7.13□□□□□ -1.27
SCFD1-205ENST00000469043 PRR33A8MZF0 331 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-205ENST00000469043 H3BS24 57 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 TSPAN15O95858 294 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 CELA3AP09093 270 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 CYP7A1P22680 504 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 FMR1Q06787 632 aaKnown RBP eCLIP7.12□□□□□ -1.27
SCFD1-205ENST00000469043 SLBPQ14493 270 aaKnown RBP eCLIP7.12□□□□□ -1.27
SCFD1-205ENST00000469043 PRR23BQ6ZRT6 265 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 SV2BQ7L1I2 683 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 THAP5Q7Z6K1 395 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 COX4I2Q96KJ9 171 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 PUS7Q96PZ0 661 aaKnown RBP7.12□□□□□ -1.27
SCFD1-205ENST00000469043 C12orf49Q9H741 205 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 FBRSQ9HAH7 460 aa7.12□□□□□ -1.27
SCFD1-205ENST00000469043 CBX7O95931 251 aa7.11□□□□□ -1.27
SCFD1-205ENST00000469043 LMNB1P20700 586 aa7.11□□□□□ -1.27
SCFD1-205ENST00000469043 LETMD1Q6P1Q0 360 aa7.11□□□□□ -1.27
SCFD1-205ENST00000469043 CNTNAP4Q9C0A0 1308 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 USP17L7P0C7H9 530 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 CFPP27918 469 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 PTPN11Q06124 597 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-205ENST00000469043 UBE2FQ969M7 185 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 FRMD6Q96NE9 622 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 ASB16Q96NS5 453 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 SETDB2Q96T68 719 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 KRTAP4-9Q9BYQ8 210 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 USP35Q9P2H5 1018 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 WWC3Q9ULE0 1092 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 TTF2Q9UNY4 1162 aaKnown RBP7.1□□□□□ -1.27
SCFD1-205ENST00000469043 ST14Q9Y5Y6 855 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 CAPN6Q9Y6Q1 641 aa7.1□□□□□ -1.27
SCFD1-205ENST00000469043 NFIBO00712 420 aa7.09□□□□□ -1.27
SCFD1-205ENST00000469043 RAC2P15153 192 aa7.09□□□□□ -1.27
SCFD1-205ENST00000469043 KIR3DL1P43629 444 aa7.09□□□□□ -1.27
SCFD1-205ENST00000469043 NKG7Q16617 165 aa7.09□□□□□ -1.27
SCFD1-205ENST00000469043 TTBK2Q6IQ55 1244 aa7.09□□□□□ -1.27
SCFD1-205ENST00000469043 FBXO15Q8NCQ5 510 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-205ENST00000469043 RIN3Q8TB24 985 aa7.09□□□□□ -1.27
SCFD1-205ENST00000469043 ALPK1Q96QP1 1244 aa7.09□□□□□ -1.27
SCFD1-205ENST00000469043 ZSWIM5Q9P217 1185 aa7.09□□□□□ -1.27
SCFD1-205ENST00000469043 EIF5BO60841 1220 aaKnown RBP7.08□□□□□ -1.28
SCFD1-205ENST00000469043 CST3P01034 146 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-205ENST00000469043 WIPI1Q5MNZ9 446 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-205ENST00000469043 TTC6Q86TZ1 520 aa7.08□□□□□ -1.28
SCFD1-205ENST00000469043 SIAH1Q8IUQ4 282 aa7.08□□□□□ -1.28
SCFD1-205ENST00000469043 LRRC56Q8IYG6 542 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-205ENST00000469043 NSUN3Q9H649 340 aaKnown RBP7.08□□□□□ -1.28
SCFD1-205ENST00000469043 C19orf73Q9NVV2 129 aa7.08□□□□□ -1.28
SCFD1-205ENST00000469043 TMEM253P0C7T8 217 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 KCNA1Q09470 495 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 LCE4AQ5TA78 99 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 PRAMEF13Q5VWM6 474 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 CILP2Q8IUL8 1156 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 ABHD4Q8TB40 342 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 XAGE3Q8WTP9 111 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 DIRC2Q96SL1 478 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 SLAMF8Q9P0V8 285 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 TACC3Q9Y6A5 838 aa7.07□□□□□ -1.28
SCFD1-205ENST00000469043 C1QTNF9P0C862 333 aa7.06□□□□□ -1.28
SCFD1-205ENST00000469043 GRK4P32298 578 aa7.06□□□□□ -1.28
SCFD1-205ENST00000469043 RPS26P62854 115 aaKnown RBP7.06□□□□□ -1.28
SCFD1-205ENST00000469043 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-205ENST00000469043 TMPRSS7Q7RTY8 843 aa7.06□□□□□ -1.28
SCFD1-205ENST00000469043 CDH24Q86UP0 819 aa7.06□□□□□ -1.28
SCFD1-205ENST00000469043 GAL3ST3Q96A11 431 aa7.06□□□□□ -1.28
SCFD1-205ENST00000469043 ZSCAN22P10073 491 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-205ENST00000469043 EIF4BP23588 611 aaKnown RBP7.05□□□□□ -1.28
SCFD1-205ENST00000469043 TNK2Q07912 1038 aa7.05□□□□□ -1.28
SCFD1-205ENST00000469043 PIWIL2Q8TC59 973 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms