RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 MAP2K2P36507 400 aa22.59■■□□□ 1.21
LMNB1-204ENST00000463908 PPARAQ07869 468 aa22.59■■□□□ 1.21
LMNB1-204ENST00000463908 NOGQ13253 232 aa22.59■■□□□ 1.21
LMNB1-204ENST00000463908 CERKLQ49MI3 558 aaPredicted RBP22.59■■□□□ 1.21
LMNB1-204ENST00000463908 CCDC84Q86UT8 332 aaPredicted RBP22.59■■□□□ 1.21
LMNB1-204ENST00000463908 STK11IPQ8N1F8 1099 aa22.59■■□□□ 1.21
LMNB1-204ENST00000463908 DSCC1Q9BVC3 393 aa22.59■■□□□ 1.21
LMNB1-204ENST00000463908 SWAP70Q9UH65 585 aa22.59■■□□□ 1.21
LMNB1-204ENST00000463908 TAOK2Q9UL54 1235 aa22.59■■□□□ 1.21
LMNB1-204ENST00000463908 TACC3Q9Y6A5 838 aa22.59■■□□□ 1.21
LMNB1-204ENST00000463908 PTH1RQ03431 593 aa22.58■■□□□ 1.21
LMNB1-204ENST00000463908 PPATQ06203 517 aa22.58■■□□□ 1.21
LMNB1-204ENST00000463908 OTUD5Q96G74 571 aa22.58■■□□□ 1.21
LMNB1-204ENST00000463908 ESYT1Q9BSJ8 1104 aa22.58■■□□□ 1.21
LMNB1-204ENST00000463908 INCENPQ9NQS7 918 aa22.58■■□□□ 1.21
LMNB1-204ENST00000463908 ZHX2Q9Y6X8 837 aa22.58■■□□□ 1.21
LMNB1-204ENST00000463908 IRF6O14896 467 aa22.57■■□□□ 1.2
LMNB1-204ENST00000463908 CDC45O75419 566 aa22.57■■□□□ 1.2
LMNB1-204ENST00000463908 ZBTB48P10074 688 aaPredicted RBP22.57■■□□□ 1.2
LMNB1-204ENST00000463908 PICK1Q9NRD5 415 aa22.57■■□□□ 1.2
LMNB1-204ENST00000463908 ANAPC4Q9UJX5 808 aa22.57■■□□□ 1.2
LMNB1-204ENST00000463908 ROBO3Q96MS0 1386 aa22.57■■□□□ 1.2
LMNB1-204ENST00000463908 ZMYM6O95789 1325 aa22.57■■□□□ 1.2
LMNB1-204ENST00000463908 GH2P01242 217 aa22.56■■□□□ 1.2
LMNB1-204ENST00000463908 GUCY1A2P33402 732 aa22.56■■□□□ 1.2
LMNB1-204ENST00000463908 CTDSPL2Q05D32 466 aa22.56■■□□□ 1.2
LMNB1-204ENST00000463908 PPIL2Q13356 520 aa22.56■■□□□ 1.2
LMNB1-204ENST00000463908 MS4A4AQ96JQ5 239 aa22.56■■□□□ 1.2
LMNB1-204ENST00000463908 AFG3L2Q9Y4W6 797 aa22.56■■□□□ 1.2
LMNB1-204ENST00000463908 ABCB5Q2M3G0 1257 aa22.55■■□□□ 1.2
LMNB1-204ENST00000463908 NBPF3Q9H094 633 aa22.55■■□□□ 1.2
LMNB1-204ENST00000463908 GINM1Q9NU53 330 aa22.55■■□□□ 1.2
LMNB1-204ENST00000463908 ZBTB21Q9ULJ3 1066 aa22.55■■□□□ 1.2
LMNB1-204ENST00000463908 THSD7BQ9C0I4 1608 aa22.55■■□□□ 1.2
LMNB1-204ENST00000463908 PRDM1O75626 825 aa22.54■■□□□ 1.2
LMNB1-204ENST00000463908 ASNSP08243 561 aa22.54■■□□□ 1.2
LMNB1-204ENST00000463908 AKR1B1P15121 316 aa22.54■■□□□ 1.2
LMNB1-204ENST00000463908 RASA1P20936 1047 aa22.54■■□□□ 1.2
LMNB1-204ENST00000463908 PRDM10Q9NQV6 1147 aa22.54■■□□□ 1.2
LMNB1-204ENST00000463908 KCNH4Q9UQ05 1017 aa22.54■■□□□ 1.2
LMNB1-204ENST00000463908 TESPA1A2RU30 521 aaPredicted RBP22.53■■□□□ 1.2
LMNB1-204ENST00000463908 USP17L5A8MUK1 530 aa22.53■■□□□ 1.2
LMNB1-204ENST00000463908 FGRP09769 529 aa22.53■■□□□ 1.2
LMNB1-204ENST00000463908 TM4SF4P48230 202 aa22.53■■□□□ 1.2
LMNB1-204ENST00000463908 HAND2P61296 217 aa22.53■■□□□ 1.2
LMNB1-204ENST00000463908 MAP4K1Q92918 833 aa22.53■■□□□ 1.2
LMNB1-204ENST00000463908 CCDC17Q96LX7 622 aa22.53■■□□□ 1.2
LMNB1-204ENST00000463908 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.53■■□□□ 1.2
LMNB1-204ENST00000463908 LSG1Q9H089 658 aaKnown RBP22.53■■□□□ 1.2
LMNB1-204ENST00000463908 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.53■■□□□ 1.2
LMNB1-204ENST00000463908 CXCL11O14625 94 aa22.52■■□□□ 1.2
LMNB1-204ENST00000463908 PTPN18Q99952 460 aa22.52■■□□□ 1.2
LMNB1-204ENST00000463908 MKNK2Q9HBH9 465 aa22.52■■□□□ 1.2
LMNB1-204ENST00000463908 MANSC4A6NHS7 340 aaPredicted RBP22.51■■□□□ 1.19
LMNB1-204ENST00000463908 SLC3A2P08195 630 aaKnown RBP22.51■■□□□ 1.19
LMNB1-204ENST00000463908 CTCFP49711 727 aaPredicted RBP22.51■■□□□ 1.19
LMNB1-204ENST00000463908 GTF2A2P52657 109 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 SPP2Q13103 211 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 MOGSQ13724 837 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 SEPT2Q15019 361 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 SIAH1Q8IUQ4 282 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 NKX2-3Q8TAU0 364 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 WDR18Q9BV38 432 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 CABP5Q9NP86 173 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 CTNNA3Q9UI47 895 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 DOCK1Q14185 1865 aa22.51■■□□□ 1.19
LMNB1-204ENST00000463908 MPHOSPH10O00566 681 aaKnown RBP22.5■■□□□ 1.19
LMNB1-204ENST00000463908 ZNF213O14771 459 aa22.5■■□□□ 1.19
LMNB1-204ENST00000463908 PDE4BQ07343 736 aa22.5■■□□□ 1.19
LMNB1-204ENST00000463908 RAB3GAP1Q15042 981 aa22.5■■□□□ 1.19
LMNB1-204ENST00000463908 TBC1D10CQ8IV04 446 aa22.5■■□□□ 1.19
LMNB1-204ENST00000463908 ZNF444Q8N0Y2 327 aaPredicted RBP22.5■■□□□ 1.19
LMNB1-204ENST00000463908 ZNF280CQ8ND82 737 aa22.5■■□□□ 1.19
LMNB1-204ENST00000463908 BRI3BPQ8WY22 251 aa22.5■■□□□ 1.19
LMNB1-204ENST00000463908 TRIM75PA6NK02 468 aa22.49■■□□□ 1.19
LMNB1-204ENST00000463908 INHBEP58166 350 aa22.49■■□□□ 1.19
LMNB1-204ENST00000463908 SNAPC2Q13487 334 aa22.49■■□□□ 1.19
LMNB1-204ENST00000463908 CASC1Q6TDU7 716 aa22.49■■□□□ 1.19
LMNB1-204ENST00000463908 KIAA1211Q6ZU35 1233 aa22.49■■□□□ 1.19
LMNB1-204ENST00000463908 TMEM179Q6ZVK1 233 aa22.49■■□□□ 1.19
LMNB1-204ENST00000463908 REM2Q8IYK8 340 aaPredicted RBP22.49■■□□□ 1.19
LMNB1-204ENST00000463908 WBP1LQ9NX94 342 aa22.49■■□□□ 1.19
LMNB1-204ENST00000463908 LAMB1P07942 1786 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 PHIPQ8WWQ0 1821 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 CCL15-CCL14A0A0B4J2E2 113 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 CCL15Q16663 113 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 FAM47AQ5JRC9 791 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 AKNAD1Q5T1N1 836 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 ACER1Q8TDN7 264 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 TBC1D2Q9BYX2 928 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 AS3MTQ9HBK9 375 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 ZNF287Q9HBT7 754 aa22.48■■□□□ 1.19
LMNB1-204ENST00000463908 U3KPZ7 1027 aaPredicted RBP22.48■■□□□ 1.19
LMNB1-204ENST00000463908 ATAD5Q96QE3 1844 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 A0A0G2JLL6 359 aaPredicted RBP22.47■■□□□ 1.19
LMNB1-204ENST00000463908 A0A1W2PRG0 241 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 IGF2BP3O00425 579 aaKnown RBP eCLIP22.47■■□□□ 1.19
LMNB1-204ENST00000463908 ORC4O43929 436 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 CETPP11597 493 aa22.47■■□□□ 1.19
LMNB1-204ENST00000463908 TFAP4Q01664 338 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms