RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 SEMA3EO15041 775 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 ZKSCAN1P17029 563 aaPredicted RBP13.74□□□□□ -0.21
SSR3-202ENST00000463503 BTDP43251 543 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 PHKA1P46020 1223 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 RHBDL3P58872 404 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 PABPC4Q13310 644 aaKnown RBP eCLIP13.74□□□□□ -0.216e-9■□□□□ 9.1
SSR3-202ENST00000463503 POTEEQ6S8J3 1075 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 PANK1Q8TE04 598 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 ZNF384Q8TF68 577 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 MYLIPQ8WY64 445 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 NUDT12Q9BQG2 462 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 SEMA6BQ9H3T3 888 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 TRANK1O15050 2925 aa13.74□□□□□ -0.21
SSR3-202ENST00000463503 MROH7-TTC4A0A0A0MT08 1334 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 ZNFX1Q9P2E3 1918 aaKnown RBP13.73□□□□□ -0.21
SSR3-202ENST00000463503 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
SSR3-202ENST00000463503 GNAI3P08754 354 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 COL9A1P20849 921 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 ATP2B3Q16720 1220 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 C9orf50Q5SZB4 431 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 MORN1Q5T089 497 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 C20orf194Q5TEA3 1177 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
SSR3-202ENST00000463503 APBA2Q99767 749 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 PORCNQ9H237 461 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 DENND2AQ9ULE3 1009 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 PLXNA1Q9UIW2 1896 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 MYO9BQ13459 2157 aa13.73□□□□□ -0.21
SSR3-202ENST00000463503 PDS5AQ29RF7 1337 aaKnown RBP13.72□□□□□ -0.21
SSR3-202ENST00000463503 CAP2P40123 477 aa13.72□□□□□ -0.21
SSR3-202ENST00000463503 HERVK_113P62684 666 aa13.72□□□□□ -0.21
SSR3-202ENST00000463503 RASGRF1Q13972 1273 aa13.72□□□□□ -0.21
SSR3-202ENST00000463503 SHHQ15465 462 aa13.72□□□□□ -0.21
SSR3-202ENST00000463503 DZIP1Q86YF9 867 aaKnown RBP13.72□□□□□ -0.21
SSR3-202ENST00000463503 TRMT44Q8IYL2 757 aaKnown RBP13.72□□□□□ -0.21
SSR3-202ENST00000463503 LBHD1Q9BQE6 289 aaPredicted RBP13.72□□□□□ -0.21
SSR3-202ENST00000463503 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
SSR3-202ENST00000463503 RAPGEFL1Q9UHV5 662 aa13.72□□□□□ -0.21
SSR3-202ENST00000463503 SMCHD1A6NHR9 2005 aa13.71□□□□□ -0.21
SSR3-202ENST00000463503 HOXA7P31268 230 aaPredicted RBP13.71□□□□□ -0.21
SSR3-202ENST00000463503 RGS2P41220 211 aa13.71□□□□□ -0.21
SSR3-202ENST00000463503 MTMR2Q13614 643 aa13.71□□□□□ -0.21
SSR3-202ENST00000463503 GPR142Q7Z601 462 aa13.71□□□□□ -0.21
SSR3-202ENST00000463503 ITPRIPQ8IWB1 547 aa13.71□□□□□ -0.21
SSR3-202ENST00000463503 P2RX7Q99572 595 aaKnown RBP13.71□□□□□ -0.21
SSR3-202ENST00000463503 SENP6Q9GZR1 1112 aaPredicted RBP13.71□□□□□ -0.21
SSR3-202ENST00000463503 RBPJLQ9UBG7 517 aa13.71□□□□□ -0.21
SSR3-202ENST00000463503 COG6Q9Y2V7 657 aa13.71□□□□□ -0.21
SSR3-202ENST00000463503 GPR75-ASB3A0A0A6YYF3 556 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 USP17L5A8MUK1 530 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 ADORA1P30542 326 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 MAPK4P31152 587 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
SSR3-202ENST00000463503 RTP1P59025 263 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 ERVK-24P63145 666 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 IRX3P78415 501 aaPredicted RBP13.7□□□□□ -0.22
SSR3-202ENST00000463503 SMAD3P84022 425 aaKnown RBP13.7□□□□□ -0.22
SSR3-202ENST00000463503 Q3C1V9 767 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 ZGPATQ8N5A5 531 aaKnown RBP13.7□□□□□ -0.22
SSR3-202ENST00000463503 USP38Q8NB14 1042 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 SYMPKQ92797 1274 aaKnown RBP13.7□□□□□ -0.22
SSR3-202ENST00000463503 MEIS3Q99687 375 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 WDR18Q9BV38 432 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 ZBTB40Q9NUA8 1239 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 GNL3LQ9NVN8 582 aaKnown RBP13.7□□□□□ -0.22
SSR3-202ENST00000463503 FLRT1Q9NZU1 646 aa13.7□□□□□ -0.22
SSR3-202ENST00000463503 COL11A1P12107 1806 aaPredicted RBP13.69□□□□□ -0.22
SSR3-202ENST00000463503 DNM1LO00429 736 aa13.69□□□□□ -0.22
SSR3-202ENST00000463503 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
SSR3-202ENST00000463503 FOSL2P15408 326 aa13.69□□□□□ -0.22
SSR3-202ENST00000463503 BACE1P56817 501 aa13.69□□□□□ -0.22
SSR3-202ENST00000463503 JAG1P78504 1218 aa13.69□□□□□ -0.22
SSR3-202ENST00000463503 SHROOM1Q2M3G4 852 aaPredicted RBP13.69□□□□□ -0.22
SSR3-202ENST00000463503 CCDC102BQ68D86 513 aa13.69□□□□□ -0.22
SSR3-202ENST00000463503 MYH8P13535 1937 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 CIAO1O76071 339 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 IGHA2P01877 340 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 GNAI2P04899 355 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 MECOMQ03112 1051 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 LPAR1Q92633 364 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 SIL1Q9H173 461 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 DNAJC18Q9H819 358 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 AS3MTQ9HBK9 375 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 ABCF2Q9UG63 623 aa13.68□□□□□ -0.22
SSR3-202ENST00000463503 DDX20Q9UHI6 824 aaKnown RBP13.68□□□□□ -0.22
SSR3-202ENST00000463503 TCF20Q9UGU0 1960 aaKnown RBP13.67□□□□□ -0.22
SSR3-202ENST00000463503 TNFRSF10AO00220 468 aa13.67□□□□□ -0.22
SSR3-202ENST00000463503 MAP2K5Q13163 448 aa13.67□□□□□ -0.22
SSR3-202ENST00000463503 MTX1Q13505 466 aa13.67□□□□□ -0.22
SSR3-202ENST00000463503 SNX17Q15036 470 aa13.67□□□□□ -0.22
SSR3-202ENST00000463503 TJAP1Q5JTD0 557 aa13.67□□□□□ -0.22
SSR3-202ENST00000463503 PLEKHH3Q7Z736 793 aa13.67□□□□□ -0.22
SSR3-202ENST00000463503 SLF2Q8IX21 1173 aa13.67□□□□□ -0.22
SSR3-202ENST00000463503 TRPV1Q8NER1 839 aa13.67□□□□□ -0.22
SSR3-202ENST00000463503 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
SSR3-202ENST00000463503 HERC5Q9UII4 1024 aaKnown RBP13.67□□□□□ -0.22
SSR3-202ENST00000463503 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms