RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 LY9Q9HBG7 655 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 ATP8A2Q9NTI2 1148 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 USP17L12C9JPN9 530 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 USP17L21D6R901 530 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 FDPSP14324 419 aaKnown RBP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 PPP4CP60510 307 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 RRP12Q5JTH9 1297 aaKnown RBP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 LRRC8AQ8IWT6 810 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 FMR1NBQ8N0W7 255 aaPredicted RBP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 SH3RF3Q8TEJ3 882 aaPredicted RBP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 CNKSR1Q969H4 720 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 BPIFA3Q9BQP9 254 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 TMX4Q9H1E5 349 aaPredicted RBP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 MKRN1Q9UHC7 482 aaKnown RBP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 ZNF646O15015 1829 aaPredicted RBP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 DDX60LQ5H9U9 1706 aaKnown RBP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 KIF13BQ9NQT8 1826 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 DOK7Q18PE1 504 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 RAB11FIP4Q86YS3 637 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 FSIP1Q8NA03 581 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 C7orf43Q8WVR3 580 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 MRPS27Q92552 414 aaKnown RBP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 FTOQ9C0B1 505 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL4A6-204ENST00000461897 TOMM22Q9NS69 142 aa14.38□□□□□ -0.11
COL4A6-204ENST00000461897 YEATS4O95619 227 aa14.37□□□□□ -0.11
COL4A6-204ENST00000461897 FGRP09769 529 aa14.37□□□□□ -0.11
COL4A6-204ENST00000461897 TMEM67Q5HYA8 995 aa14.37□□□□□ -0.11
COL4A6-204ENST00000461897 APOA5Q6Q788 366 aa14.37□□□□□ -0.11
COL4A6-204ENST00000461897 SGMS1Q86VZ5 419 aa14.37□□□□□ -0.11
COL4A6-204ENST00000461897 CEP57L1Q8IYX8 460 aa14.37□□□□□ -0.11
COL4A6-204ENST00000461897 CERS5Q8N5B7 392 aa14.37□□□□□ -0.11
COL4A6-204ENST00000461897 SLC16A10Q8TF71 515 aa14.37□□□□□ -0.11
COL4A6-204ENST00000461897 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
COL4A6-204ENST00000461897 SCN9AQ15858 1988 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 GAKO14976 1311 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 LDHCP07864 332 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 CYP2D6P10635 497 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 TNNT1P13805 278 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 LIFRP42702 1097 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 BTDP43251 543 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 SBK1Q52WX2 424 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 PDCL2Q8N4E4 241 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 LINC00301Q8NCQ3 95 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 PKNOX2Q96KN3 472 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 EYA3Q99504 573 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 NAT10Q9H0A0 1025 aaKnown RBP14.36□□□□□ -0.11
COL4A6-204ENST00000461897 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
COL4A6-204ENST00000461897 ARPP21Q9UBL0 812 aaPredicted RBP14.36□□□□□ -0.11
COL4A6-204ENST00000461897 PCDHA7Q9UN72 937 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 FOCADQ5VW36 1801 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 ADAMTSL1Q8N6G6 1762 aa14.36□□□□□ -0.11
COL4A6-204ENST00000461897 GPR75-ASB3A0A0A6YYF3 556 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 IFIT3O14879 490 aaKnown RBP14.35□□□□□ -0.11
COL4A6-204ENST00000461897 PPFIA3O75145 1194 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 BAG3O95817 575 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 CEBPZQ03701 1054 aaKnown RBP14.35□□□□□ -0.11
COL4A6-204ENST00000461897 NYAP1Q6ZVC0 841 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 CCDC125Q86Z20 511 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 KCNG4Q8TDN1 519 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 FAM163AQ96GL9 167 aaPredicted RBP14.35□□□□□ -0.11
COL4A6-204ENST00000461897 ZKSCAN3Q9BRR0 538 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 OSBPL5Q9H0X9 879 aaPredicted RBP14.35□□□□□ -0.11
COL4A6-204ENST00000461897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL4A6-204ENST00000461897 DHX16O60231 1041 aaKnown RBP14.35□□□□□ -0.11
COL4A6-204ENST00000461897 USP17L8P0C7I0 530 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 PCP11498 1178 aaKnown RBP14.35□□□□□ -0.11
COL4A6-204ENST00000461897 ME1P48163 572 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 UTP14CQ5TAP6 766 aaKnown RBP14.35□□□□□ -0.11
COL4A6-204ENST00000461897 ESR2Q92731 530 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 FBXW7Q969H0 707 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 NOL10Q9BSC4 688 aaKnown RBP14.35□□□□□ -0.11
COL4A6-204ENST00000461897 MTA3Q9BTC8 594 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 DBNDD1Q9H9R9 158 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 IMPACTQ9P2X3 320 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 PRDM4Q9UKN5 801 aa14.35□□□□□ -0.11
COL4A6-204ENST00000461897 BECN2A8MW95 431 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 PRDM1O75626 825 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 RXRAP19793 462 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 USP5P45974 858 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 GSDMDP57764 484 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 CCZ1BP86790 482 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 CCZ1P86791 482 aaPredicted RBP14.34□□□□□ -0.11
COL4A6-204ENST00000461897 NCBP1Q09161 790 aaKnown RBP14.34□□□□□ -0.11
COL4A6-204ENST00000461897 DHX8Q14562 1220 aaKnown RBP14.34□□□□□ -0.11
COL4A6-204ENST00000461897 FBXO18Q8NFZ0 1043 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 C16orf45Q96MC5 204 aaPredicted RBP14.34□□□□□ -0.11
COL4A6-204ENST00000461897 MXD3Q9BW11 206 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 SUGT1Q9Y2Z0 365 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 ECM29Q5VYK3 1845 aa14.34□□□□□ -0.11
COL4A6-204ENST00000461897 METAP2P50579 478 aaKnown RBP eCLIP14.33□□□□□ -0.11
COL4A6-204ENST00000461897 RHBDL3P58872 404 aa14.33□□□□□ -0.11
COL4A6-204ENST00000461897 SART3Q15020 963 aaKnown RBP14.33□□□□□ -0.11
COL4A6-204ENST00000461897 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.11
COL4A6-204ENST00000461897 NFXL1Q6ZNB6 911 aa14.33□□□□□ -0.11
COL4A6-204ENST00000461897 PODNQ7Z5L7 613 aa14.33□□□□□ -0.11
COL4A6-204ENST00000461897 MICU3Q86XE3 530 aa14.33□□□□□ -0.11
COL4A6-204ENST00000461897 CERS3Q8IU89 383 aa14.33□□□□□ -0.11
COL4A6-204ENST00000461897 TGFBRAP1Q8WUH2 860 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms