RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 IDH1O75874 414 aaKnown RBP15.15■□□□□ 0.02
HDAC4-207ENST00000461113 FKBP1CQ5VVH2 108 aa15.15■□□□□ 0.02
HDAC4-207ENST00000461113 NAA16Q6N069 864 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-207ENST00000461113 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
HDAC4-207ENST00000461113 HAUS7Q99871 368 aa15.15■□□□□ 0.02
HDAC4-207ENST00000461113 PAG1Q9NWQ8 432 aa15.15■□□□□ 0.02
HDAC4-207ENST00000461113 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
HDAC4-207ENST00000461113 GOLIM4O00461 696 aa15.14■□□□□ 0.01
HDAC4-207ENST00000461113 CXCL11O14625 94 aa15.14■□□□□ 0.01
HDAC4-207ENST00000461113 BAG3O95817 575 aa15.14■□□□□ 0.01
HDAC4-207ENST00000461113 CYP2E1P05181 493 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-207ENST00000461113 MDM2Q00987 491 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-207ENST00000461113 MECOMQ03112 1051 aa15.14■□□□□ 0.01
HDAC4-207ENST00000461113 ZSCAN25Q6NSZ9 544 aa15.14■□□□□ 0.01
HDAC4-207ENST00000461113 APOBEC3HQ6NTF7 200 aaKnown RBP15.14■□□□□ 0.01
HDAC4-207ENST00000461113 CENPQQ7L2Z9 268 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-207ENST00000461113 COA7Q96BR5 231 aa15.14■□□□□ 0.01
HDAC4-207ENST00000461113 ALPK3Q96L96 1907 aa15.13■□□□□ 0.01
HDAC4-207ENST00000461113 TRIM32Q13049 653 aa15.13■□□□□ 0.01
HDAC4-207ENST00000461113 NOL9Q5SY16 702 aaKnown RBP15.13■□□□□ 0.01
HDAC4-207ENST00000461113 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
HDAC4-207ENST00000461113 MAFAQ8NHW3 353 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-207ENST00000461113 RAPGEFL1Q9UHV5 662 aa15.13■□□□□ 0.01
HDAC4-207ENST00000461113 RPAP1Q9BWH6 1393 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-207ENST00000461113 MAP4K4O95819 1239 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-207ENST00000461113 HMGCRP04035 888 aa15.12■□□□□ 0.01
HDAC4-207ENST00000461113 PLCG2P16885 1265 aa15.12■□□□□ 0.01
HDAC4-207ENST00000461113 DIXDC1Q155Q3 683 aa15.12■□□□□ 0.01
HDAC4-207ENST00000461113 ZNF697Q5TEC3 545 aa15.12■□□□□ 0.01
HDAC4-207ENST00000461113 GADL1Q6ZQY3 521 aa15.12■□□□□ 0.01
HDAC4-207ENST00000461113 FASTKD5Q7L8L6 764 aaKnown RBP15.12■□□□□ 0.01
HDAC4-207ENST00000461113 SMCR8Q8TEV9 937 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-207ENST00000461113 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
HDAC4-207ENST00000461113 FAM163AQ96GL9 167 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-207ENST00000461113 CDX2Q99626 313 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-207ENST00000461113 HMX1Q9NP08 348 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-207ENST00000461113 PIH1D3Q9NQM4 214 aaKnown RBP15.12■□□□□ 0.01
HDAC4-207ENST00000461113 PFASO15067 1338 aa15.12■□□□□ 0.01
HDAC4-207ENST00000461113 A0A0G2JLL6 359 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-207ENST00000461113 CYP7A1P22680 504 aa15.11■□□□□ 0.01
HDAC4-207ENST00000461113 PDE1AP54750 535 aa15.11■□□□□ 0.01
HDAC4-207ENST00000461113 PRRT2Q7Z6L0 340 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-207ENST00000461113 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
HDAC4-207ENST00000461113 FAM151AQ8WW52 585 aa15.11■□□□□ 0.01
HDAC4-207ENST00000461113 USP40Q9NVE5 1235 aa15.11■□□□□ 0.01
HDAC4-207ENST00000461113 PPP4R2Q9NY27 417 aa15.11■□□□□ 0.01
HDAC4-207ENST00000461113 DAGLAQ9Y4D2 1042 aa15.11■□□□□ 0.01
HDAC4-207ENST00000461113 MROH7-TTC4A0A0A0MT08 1334 aa15.11■□□□□ 0.01
HDAC4-207ENST00000461113 BTDP43251 543 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 TCP10Q12799 353 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 SLC9C2Q5TAH2 1124 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 TSHZ3Q63HK5 1081 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 MAGEB6Q8N7X4 407 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 SYMPKQ92797 1274 aaKnown RBP15.1■□□□□ 0.01
HDAC4-207ENST00000461113 ANTXR1Q9H6X2 564 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 OGDHLQ9ULD0 1010 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 SLC45A1Q9Y2W3 748 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 NDUFB9Q9Y6M9 179 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 ZHX2Q9Y6X8 837 aa15.1■□□□□ 0.01
HDAC4-207ENST00000461113 OTUD7AQ8TE49 926 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-207ENST00000461113 GAKO14976 1311 aa15.09■□□□□ 0.01
HDAC4-207ENST00000461113 EYSQ5T1H1 3165 aa15.08■□□□□ 0.01
HDAC4-207ENST00000461113 GPR75-ASB3A0A0A6YYF3 556 aa15.08■□□□□ 0
HDAC4-207ENST00000461113 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0
HDAC4-207ENST00000461113 ZFYP08048 801 aaPredicted RBP15.08■□□□□ 0
HDAC4-207ENST00000461113 PTPRAP18433 802 aa15.08■□□□□ 0
HDAC4-207ENST00000461113 LRRC26Q2I0M4 334 aa15.08■□□□□ 0
HDAC4-207ENST00000461113 KBTBD3Q8NAB2 608 aa15.08■□□□□ 0
HDAC4-207ENST00000461113 EVI5LQ96CN4 794 aa15.08■□□□□ 0
HDAC4-207ENST00000461113 FSD1Q9BTV5 496 aa15.08■□□□□ 0
HDAC4-207ENST00000461113 SEMA6BQ9H3T3 888 aa15.08■□□□□ 0
HDAC4-207ENST00000461113 PICK1Q9NRD5 415 aa15.08■□□□□ 0
HDAC4-207ENST00000461113 COL2A1P02458 1487 aaPredicted RBP15.08■□□□□ 0
HDAC4-207ENST00000461113 COL6A1P12109 1028 aa15.07■□□□□ 0
HDAC4-207ENST00000461113 PDE6AP16499 860 aa15.07■□□□□ 0
HDAC4-207ENST00000461113 CDC42EP5Q6NZY7 148 aa15.07■□□□□ 0
HDAC4-207ENST00000461113 PI4K2BQ8TCG2 481 aa15.07■□□□□ 0
HDAC4-207ENST00000461113 MYLIPQ8WY64 445 aa15.07■□□□□ 0
HDAC4-207ENST00000461113 EDC3Q96F86 508 aaKnown RBP15.07■□□□□ 0
HDAC4-207ENST00000461113 GJD2Q9UKL4 321 aa15.07■□□□□ 0
HDAC4-207ENST00000461113 AFG3L2Q9Y4W6 797 aa15.07■□□□□ 0
HDAC4-207ENST00000461113 TTC28Q96AY4 2481 aa15.07■□□□□ 0
HDAC4-207ENST00000461113 MAGEB6P1A0A0J9YX57 407 aa15.06■□□□□ 0
HDAC4-207ENST00000461113 PPP4CP60510 307 aa15.06■□□□□ 0
HDAC4-207ENST00000461113 NFIAQ12857 509 aa15.06■□□□□ 0
HDAC4-207ENST00000461113 UBE3CQ15386 1083 aa15.06■□□□□ 0
HDAC4-207ENST00000461113 FAM110CQ1W6H9 321 aa15.06■□□□□ 0
HDAC4-207ENST00000461113 PLEKHM2Q8IWE5 1019 aa15.06■□□□□ 0
HDAC4-207ENST00000461113 TEX11Q8IYF3 940 aa15.06■□□□□ 0
HDAC4-207ENST00000461113 SCYL3Q8IZE3 742 aa15.06■□□□□ 0
HDAC4-207ENST00000461113 LBHD1Q9BQE6 289 aaPredicted RBP15.06■□□□□ 0
HDAC4-207ENST00000461113 OSBPL3Q9H4L5 887 aa15.06■□□□□ 0
HDAC4-207ENST00000461113 AATFQ9NY61 560 aaKnown RBP eCLIP15.06■□□□□ 0
HDAC4-207ENST00000461113 TRIM75PA6NK02 468 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 PHF20L1A8MW92 1017 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 TNFRSF10AO00220 468 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 PLA2G5P39877 138 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 TICAM2Q86XR7 235 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 ZSCAN29Q8IWY8 852 aaPredicted RBP15.05■□□□□ -0
HDAC4-207ENST00000461113 TRIB2Q92519 343 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms