RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 MYO6Q9UM54 1294 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 JRKLQ9Y4A0 524 aa15.56■□□□□ 0.08
PTPRE-204ENST00000455661 LRRIQ3A6PVS8 624 aaPredicted RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 BTBD18B2RXH4 712 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 RANBP6O60518 1105 aaKnown RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 PPFIA4O75335 1185 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 APPP05067 770 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 KLHL10Q6JEL2 608 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 APTXQ7Z2E3 356 aaKnown RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 PACS2Q86VP3 889 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 CERS3Q8IU89 383 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 SPATA20Q8TB22 786 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 PUS3Q9BZE2 481 aaKnown RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 CAMTA1Q9Y6Y1 1673 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 SCN11AQ9UI33 1791 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 ACTN4O43707 911 aaKnown RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 RNF40O75150 1001 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 FMNL1O95466 1100 aaPredicted RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 MMP1P03956 469 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 TATP17735 454 aaPredicted RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 TOB1P50616 345 aaPredicted RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 GRIN1Q05586 938 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 LMOD2Q6P5Q4 547 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 TBC1D10CQ8IV04 446 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 DIS3L2Q8IYB7 885 aaKnown RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 IFNL2Q8IZJ0 200 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 ACRBPQ8NEB7 543 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 AXIN2Q9Y2T1 843 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 SRPRBQ9Y5M8 271 aaKnown RBP15.55■□□□□ 0.08
PTPRE-204ENST00000455661 ITIH6Q6UXX5 1313 aa15.55■□□□□ 0.08
PTPRE-204ENST00000455661 B4E1Z4 1266 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 ADORA1P30542 326 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 CCDC57Q2TAC2 916 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 TMEM67Q5HYA8 995 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 CYP26C1Q6V0L0 522 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 EFCAB13Q8IY85 973 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 NBPF3Q9H094 633 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 FAM107BQ9H098 131 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 FOXP1Q9H334 677 aaPredicted RBP15.54■□□□□ 0.08
PTPRE-204ENST00000455661 SLC12A7Q9Y666 1083 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 WDR17Q8IZU2 1322 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 ABCC12Q96J65 1359 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 FECHP22830 423 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 AARSP49588 968 aaKnown RBP eCLIP15.54■□□□□ 0.08
PTPRE-204ENST00000455661 STX17P56962 302 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 DNAJC21Q5F1R6 531 aaKnown RBP15.54■□□□□ 0.08
PTPRE-204ENST00000455661 SGMS1Q86VZ5 419 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 TRIM22Q8IYM9 498 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 IGDCC4Q8TDY8 1250 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 DENND2AQ9ULE3 1009 aa15.54■□□□□ 0.08
PTPRE-204ENST00000455661 AKAP17AQ02040 695 aaKnown RBP15.53■□□□□ 0.08
PTPRE-204ENST00000455661 CDKAL1Q5VV42 579 aa15.53■□□□□ 0.08
PTPRE-204ENST00000455661 NOA1Q8NC60 698 aaKnown RBP15.53■□□□□ 0.08
PTPRE-204ENST00000455661 SENP2Q9HC62 589 aa15.53■□□□□ 0.08
PTPRE-204ENST00000455661 TBC1D2BQ9UPU7 963 aa15.53■□□□□ 0.08
PTPRE-204ENST00000455661 GYPCP04921 128 aa15.52■□□□□ 0.08
PTPRE-204ENST00000455661 FXR1P51114 621 aaKnown RBP eCLIP15.52■□□□□ 0.08
PTPRE-204ENST00000455661 SCARF1Q14162 830 aa15.52■□□□□ 0.08
PTPRE-204ENST00000455661 MYL10Q9BUA6 226 aa15.52■□□□□ 0.08
PTPRE-204ENST00000455661 DEF6Q9H4E7 631 aa15.52■□□□□ 0.08
PTPRE-204ENST00000455661 LY9Q9HBG7 655 aa15.52■□□□□ 0.08
PTPRE-204ENST00000455661 FAM217BQ9NTX9 383 aaPredicted RBP15.52■□□□□ 0.08
PTPRE-204ENST00000455661 FBXO3Q9UK99 471 aa15.52■□□□□ 0.08
PTPRE-204ENST00000455661 IFNAR1P17181 557 aa15.52■□□□□ 0.07
PTPRE-204ENST00000455661 LIFRP42702 1097 aa15.52■□□□□ 0.07
PTPRE-204ENST00000455661 TRIM14Q14142 442 aa15.52■□□□□ 0.07
PTPRE-204ENST00000455661 NUP88Q99567 741 aaPredicted RBP15.52■□□□□ 0.07
PTPRE-204ENST00000455661 CSRNP2Q9H175 543 aa15.52■□□□□ 0.07
PTPRE-204ENST00000455661 TFRCP02786 760 aaKnown RBP15.51■□□□□ 0.07
PTPRE-204ENST00000455661 GUCY2CP25092 1073 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 USP14P54578 494 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 AMPD2Q01433 879 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 CUL4BQ13620 913 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 NCAPH2Q6IBW4 605 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 ANKRD20A12PQ8NF67 263 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 SMARCC1Q92922 1105 aaPredicted RBP15.51■□□□□ 0.07
PTPRE-204ENST00000455661 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 ABHD10Q9NUJ1 306 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 NLRP2Q9NX02 1062 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 KCNJ14Q9UNX9 436 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 PCDHB6Q9Y5E3 794 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 ECM29Q5VYK3 1845 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 IFIT3O14879 490 aaKnown RBP15.51■□□□□ 0.07
PTPRE-204ENST00000455661 SYF2O95926 243 aaKnown RBP15.51■□□□□ 0.07
PTPRE-204ENST00000455661 ATP2B1P20020 1258 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 ARHGAP25P42331 645 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 AFMP43652 599 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 ERVK-24P63145 666 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 GSDMAQ96QA5 445 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 SEC31BQ9NQW1 1179 aa15.51■□□□□ 0.07
PTPRE-204ENST00000455661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.07
PTPRE-204ENST00000455661 A0A087WUV0 522 aaPredicted RBP15.5■□□□□ 0.07
PTPRE-204ENST00000455661 UBE2Q2LH0YL09 131 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 N4BP3O15049 544 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 CD44P16070 742 aaKnown RBP15.5■□□□□ 0.07
PTPRE-204ENST00000455661 ADD2P35612 726 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 EIF5P55010 431 aaKnown RBP15.5■□□□□ 0.07
PTPRE-204ENST00000455661 TTF1Q15361 905 aaPredicted RBP15.5■□□□□ 0.07
PTPRE-204ENST00000455661 TAF7LQ5H9L4 462 aa15.5■□□□□ 0.07
PTPRE-204ENST00000455661 GEMIN8Q9NWZ8 242 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms