RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 IGKV6D-41A0A0C4DH26 115 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 B4E1Z4 1266 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 KDM4AO75164 1064 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 PRDM1O75626 825 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 ITGBL1O95965 494 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-206ENST00000454852 CASTP20810 708 aaKnown RBP13.28□□□□□ -0.28
TRAF4-206ENST00000454852 ANTXR2P58335 489 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 CCDC178Q5BJE1 867 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 MAP1SQ66K74 1059 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-206ENST00000454852 NKX2-3Q8TAU0 364 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 ZNF526Q8TF50 670 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-206ENST00000454852 ANKS1AQ92625 1134 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 TMEM87BQ96K49 555 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 TTC14Q96N46 770 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAF4-206ENST00000454852 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
TRAF4-206ENST00000454852 CTNND1O60716 968 aaKnown RBP13.27□□□□□ -0.29
TRAF4-206ENST00000454852 NF2P35240 595 aa13.27□□□□□ -0.29
TRAF4-206ENST00000454852 CAP2P40123 477 aa13.27□□□□□ -0.29
TRAF4-206ENST00000454852 FKBP1BP68106 108 aa13.27□□□□□ -0.29
TRAF4-206ENST00000454852 COL9A3Q14050 684 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-206ENST00000454852 RRP1BQ14684 758 aaKnown RBP13.27□□□□□ -0.29
TRAF4-206ENST00000454852 CERKLQ49MI3 558 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-206ENST00000454852 PPP4R3BQ5MIZ7 849 aa13.27□□□□□ -0.29
TRAF4-206ENST00000454852 NOL9Q5SY16 702 aaKnown RBP13.27□□□□□ -0.29
TRAF4-206ENST00000454852 CYB5R4Q7L1T6 521 aa13.27□□□□□ -0.29
TRAF4-206ENST00000454852 KLRG1Q96E93 195 aa13.27□□□□□ -0.29
TRAF4-206ENST00000454852 TSPY2A6NKD2 308 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 FAM196BA6NMK8 535 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 PRC1O43663 620 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 PPP1R12BO60237 982 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-206ENST00000454852 RANBP6O60518 1105 aaKnown RBP13.26□□□□□ -0.29
TRAF4-206ENST00000454852 USP2O75604 605 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-206ENST00000454852 TSPY3P0CV98 308 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 TSPY8P0CW00 308 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 SLURP2P0DP57 97 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 AKR1B1P15121 316 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 YY1P25490 414 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 LIFRP42702 1097 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 EVCP57679 992 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 TFAP4Q01664 338 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 SEC23AQ15436 765 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 PRAMEF18Q5VWM3 479 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 TMEM179Q6ZVK1 233 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 IQCA1Q86XH1 822 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 DGKHQ86XP1 1220 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.26□□□□□ -0.291e-6■■■□□ 14.9
TRAF4-206ENST00000454852 RBM46Q8TBY0 533 aaKnown RBP13.26□□□□□ -0.29
TRAF4-206ENST00000454852 IGDCC4Q8TDY8 1250 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 UPF3BQ9BZI7 483 aaKnown RBP13.26□□□□□ -0.29
TRAF4-206ENST00000454852 IL17RBQ9NRM6 502 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 SYNPO2Q9UMS6 1093 aa13.26□□□□□ -0.29
TRAF4-206ENST00000454852 DOCK1Q14185 1865 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 PASKQ96RG2 1323 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 SH2B2O14492 632 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-206ENST00000454852 TOMM70O94826 608 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 ASNSP08243 561 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 NEK4P51957 841 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 SART3Q15020 963 aaKnown RBP13.25□□□□□ -0.29
TRAF4-206ENST00000454852 ABCB5Q2M3G0 1257 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
TRAF4-206ENST00000454852 RCSD1Q6JBY9 416 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 ZNF784Q8NCA9 323 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-206ENST00000454852 SMC1BQ8NDV3 1235 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 SNX21Q969T3 373 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 ZSCAN10Q96SZ4 725 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-206ENST00000454852 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 TSHZ2Q9NRE2 1034 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 TOMM22Q9NS69 142 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 ANGEL1Q9UNK9 670 aaKnown RBP13.25□□□□□ -0.29
TRAF4-206ENST00000454852 TRPM7Q96QT4 1865 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 ATAD5Q96QE3 1844 aa13.25□□□□□ -0.29
TRAF4-206ENST00000454852 TNKSO95271 1327 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 OTOFQ9HC10 1997 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 ST18O60284 1047 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 GUCY1A2P33402 732 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 IREB2P48200 963 aaKnown RBP13.24□□□□□ -0.29
TRAF4-206ENST00000454852 MCM2P49736 904 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 RCAN1P53805 252 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 JAG1P78504 1218 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 ANKRD1Q15327 319 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 FAM47AQ5JRC9 791 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 LDLRAD1Q5T700 205 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 DLK2Q6UY11 383 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 SCYL3Q8IZE3 742 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 TMTC2Q8N394 836 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 MKL1Q969V6 931 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 UBAC1Q9BSL1 405 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 TBC1D2Q9BYX2 928 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 CABP5Q9NP86 173 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 PDRG1Q9NUG6 133 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 NYAP2Q9P242 653 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
TRAF4-206ENST00000454852 TRAF5O00463 557 aa13.23□□□□□ -0.29
TRAF4-206ENST00000454852 CPA1P15085 419 aa13.23□□□□□ -0.29
TRAF4-206ENST00000454852 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms