RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RASGRP2Q7LDG7 609 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 USHBP1Q8N6Y0 703 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 FRS2Q8WU20 508 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 RAPGEF4Q8WZA2 1011 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 MKNK1Q9BUB5 465 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 LGR6Q9HBX8 967 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 ADCY9O60503 1353 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 SALL3Q9BXA9 1300 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 TEFQ10587 303 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 PPP2R5CQ13362 524 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 CHRNA2Q15822 529 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 LVRNQ6Q4G3 990 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 MAATS1Q7Z4T9 603 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 APPL2Q8NEU8 664 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 PAWRQ96IZ0 340 aaKnown RBP9.08□□□□□ -0.96
BRCC3-208ENST00000453705 HYPKQ9NX55 129 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 DDX41Q9UJV9 622 aaKnown RBP9.08□□□□□ -0.96
BRCC3-208ENST00000453705 USP17L3A6NCW0 530 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 USP17L4A6NCW7 530 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 BTBD11A6QL63 1104 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 GOLGA6L6A8MZA4 724 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 PRRT4C9JH25 899 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 LZTS3O60299 673 aaPredicted RBP9.08□□□□□ -0.96
BRCC3-208ENST00000453705 SORBS3O60504 671 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 RASA3Q14644 834 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 USP17L2Q6R6M4 530 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 G2E3Q7L622 706 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 USP17L1Q7RTZ2 530 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 CLP1Q92989 425 aaKnown RBP9.08□□□□□ -0.96
BRCC3-208ENST00000453705 PGBD4Q96DM1 585 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 RABL2AQ9UBK7 228 aaPredicted RBP9.08□□□□□ -0.96
BRCC3-208ENST00000453705 DBF4Q9UBU7 674 aaPredicted RBP9.08□□□□□ -0.96
BRCC3-208ENST00000453705 COQ9O75208 318 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 KATNA1O75449 491 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 IL4RP24394 825 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 ATP8B2P98198 1209 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 DDB1Q16531 1140 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 RGL4Q8IZJ4 473 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 ZFPM2Q8WW38 1151 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 MPP4Q96JB8 637 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 CDHR5Q9HBB8 845 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 DNMT3AQ9Y6K1 912 aaPredicted RBP9.07□□□□□ -0.96
BRCC3-208ENST00000453705 LAMB2P55268 1798 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 JCADQ9P266 1359 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 GNAI2P04899 355 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 PGRP06401 933 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 ATF4P18848 351 aaPredicted RBP9.07□□□□□ -0.96
BRCC3-208ENST00000453705 CHADLQ6NUI6 762 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 LCA5Q86VQ0 697 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 HVCN1Q96D96 273 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 PRIMPOLQ96LW4 560 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 DDX21Q9NR30 783 aaKnown RBP eCLIP9.07□□□□□ -0.96
BRCC3-208ENST00000453705 SH3GLB2Q9NR46 395 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 CGNQ9P2M7 1197 aaKnown RBP9.07□□□□□ -0.96
BRCC3-208ENST00000453705 ODF2LQ9ULJ1 636 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 MAFFQ9ULX9 164 aa9.07□□□□□ -0.96
BRCC3-208ENST00000453705 USP42Q9H9J4 1324 aaKnown RBP9.06□□□□□ -0.96
BRCC3-208ENST00000453705 DOT1LQ8TEK3 1739 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 HALP42357 657 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 ST13P50502 369 aaKnown RBP9.06□□□□□ -0.96
BRCC3-208ENST00000453705 RC3H1Q5TC82 1133 aaKnown RBP9.06□□□□□ -0.96
BRCC3-208ENST00000453705 KIAA1614Q5VZ46 1190 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 CDC37L1Q7L3B6 337 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 LRP10Q7Z4F1 713 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 ANKRD13BQ86YJ7 626 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 SSH3Q8TE77 659 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 SLKQ9H2G2 1235 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-208ENST00000453705 TCEA3O75764 348 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 BPIFB3P59826 476 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 PTK7Q13308 1070 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 BEND3Q5T5X7 828 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 UNC5DQ6UXZ4 953 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-208ENST00000453705 CPXCR1Q8N123 301 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 PPHLN1Q8NEY8 458 aaKnown RBP9.06□□□□□ -0.96
BRCC3-208ENST00000453705 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
BRCC3-208ENST00000453705 PAIP2Q9BPZ3 127 aaKnown RBP9.06□□□□□ -0.96
BRCC3-208ENST00000453705 USP25Q9UHP3 1055 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 LEMD3Q9Y2U8 911 aa9.06□□□□□ -0.96
BRCC3-208ENST00000453705 COL5A3P25940 1745 aaPredicted RBP9.05□□□□□ -0.96
BRCC3-208ENST00000453705 DNAJB2P25686 324 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 CNGA1P29973 690 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 KIAA0907Q7Z7F0 614 aaPredicted RBP9.05□□□□□ -0.96
BRCC3-208ENST00000453705 RASSF3Q86WH2 238 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 DDX42Q86XP3 938 aaKnown RBP eCLIP9.05□□□□□ -0.96
BRCC3-208ENST00000453705 PHC3Q8NDX5 983 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 SPEF2Q9C093 1822 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 SMTNL1A8MU46 457 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 CYP27B1O15528 508 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 ORC4O43929 436 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 NCAM1P13591 858 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 SNX16P57768 344 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 ALFQ53S48 1182 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 ZNF496Q96IT1 587 aaPredicted RBP9.05□□□□□ -0.96
BRCC3-208ENST00000453705 MEIS3Q99687 375 aa9.05□□□□□ -0.96
BRCC3-208ENST00000453705 STAP2Q9UGK3 403 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms