RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 TSPY3P0CV98 308 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 TSPY8P0CW00 308 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 AKR1B1P15121 316 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 MCM5P33992 734 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 TFAP4Q01664 338 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 RABEP1Q15276 862 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 FAM47AQ5JRC9 791 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 RUFY3Q7L099 469 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 DHX32Q7L7V1 743 aaKnown RBP17.27■□□□□ 0.36
SHANK2-210ENST00000449116 SMC1BQ8NDV3 1235 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 ZSWIM5Q9P217 1185 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 ZNF112Q9UJU3 913 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 CYP46A1Q9Y6A2 500 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 TOMM70O94826 608 aa17.26■□□□□ 0.35
SHANK2-210ENST00000449116 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
SHANK2-210ENST00000449116 COL9A3Q14050 684 aaPredicted RBP17.26■□□□□ 0.35
SHANK2-210ENST00000449116 RRP1BQ14684 758 aaKnown RBP17.26■□□□□ 0.35
SHANK2-210ENST00000449116 ABCB5Q2M3G0 1257 aa17.26■□□□□ 0.35
SHANK2-210ENST00000449116 CYB5R4Q7L1T6 521 aa17.26■□□□□ 0.35
SHANK2-210ENST00000449116 NEDD1Q8NHV4 660 aa17.26■□□□□ 0.35
SHANK2-210ENST00000449116 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
SHANK2-210ENST00000449116 KLRG1Q96E93 195 aa17.26■□□□□ 0.35
SHANK2-210ENST00000449116 UPF3BQ9BZI7 483 aaKnown RBP17.26■□□□□ 0.35
SHANK2-210ENST00000449116 PLIN4Q96Q06 1357 aa17.26■□□□□ 0.35
SHANK2-210ENST00000449116 MYH8P13535 1937 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 WDR19Q8NEZ3 1342 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 MPHOSPH10O00566 681 aaKnown RBP17.25■□□□□ 0.35
SHANK2-210ENST00000449116 PRC1O43663 620 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 CTNND1O60716 968 aaKnown RBP17.25■□□□□ 0.35
SHANK2-210ENST00000449116 USP2O75604 605 aaPredicted RBP17.25■□□□□ 0.35
SHANK2-210ENST00000449116 GDF11O95390 407 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 CPA1P15085 419 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 CAP2P40123 477 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 ANTXR2P58335 489 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 EXOSC10Q01780 885 aaKnown RBP17.25■□□□□ 0.35
SHANK2-210ENST00000449116 FMR1Q06787 632 aaKnown RBP eCLIP17.25■□□□□ 0.35
SHANK2-210ENST00000449116 PRKG1Q13976 671 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 MTA3Q9BTC8 594 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 ZNF408Q9H9D4 720 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 CABP5Q9NP86 173 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 FZD1Q9UP38 647 aa17.25■□□□□ 0.35
SHANK2-210ENST00000449116 IREB2P48200 963 aaKnown RBP17.24■□□□□ 0.35
SHANK2-210ENST00000449116 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
SHANK2-210ENST00000449116 MAP3K11Q16584 847 aa17.24■□□□□ 0.35
SHANK2-210ENST00000449116 TMEM179Q6ZVK1 233 aa17.24■□□□□ 0.35
SHANK2-210ENST00000449116 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
SHANK2-210ENST00000449116 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
SHANK2-210ENST00000449116 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
SHANK2-210ENST00000449116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHANK2-210ENST00000449116 ZSCAN10Q96SZ4 725 aaPredicted RBP17.24■□□□□ 0.35
SHANK2-210ENST00000449116 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
SHANK2-210ENST00000449116 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHANK2-210ENST00000449116 GINM1Q9NU53 330 aa17.24■□□□□ 0.35
SHANK2-210ENST00000449116 PDRG1Q9NUG6 133 aa17.24■□□□□ 0.35
SHANK2-210ENST00000449116 TCP11L1Q9NUJ3 509 aa17.24■□□□□ 0.35
SHANK2-210ENST00000449116 ANGEL1Q9UNK9 670 aaKnown RBP17.24■□□□□ 0.35
SHANK2-210ENST00000449116 CELF2O95319 508 aaKnown RBP17.23■□□□□ 0.35
SHANK2-210ENST00000449116 GH2P01242 217 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 INPP5BP32019 993 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 NEK4P51957 841 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 FKBP1BP68106 108 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 MAP3K9P80192 1104 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
SHANK2-210ENST00000449116 CCDC178Q5BJE1 867 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 TMEM87BQ96K49 555 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 TCEANC2Q96MN5 208 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 ZKSCAN3Q9BRR0 538 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 IL17RBQ9NRM6 502 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 ZBTB21Q9ULJ3 1066 aa17.23■□□□□ 0.35
SHANK2-210ENST00000449116 PASKQ96RG2 1323 aa17.22■□□□□ 0.35
SHANK2-210ENST00000449116 IGKV6D-41A0A0C4DH26 115 aa17.22■□□□□ 0.35
SHANK2-210ENST00000449116 ERICH2A1L162 156 aa17.22■□□□□ 0.35
SHANK2-210ENST00000449116 IFIT3O14879 490 aaKnown RBP17.22■□□□□ 0.35
SHANK2-210ENST00000449116 NMT2O60551 498 aa17.22■□□□□ 0.35
SHANK2-210ENST00000449116 ASNSP08243 561 aa17.22■□□□□ 0.35
SHANK2-210ENST00000449116 JAG1P78504 1218 aa17.22■□□□□ 0.35
SHANK2-210ENST00000449116 SHROOM1Q2M3G4 852 aaPredicted RBP17.22■□□□□ 0.35
SHANK2-210ENST00000449116 PPP4R3BQ5MIZ7 849 aa17.22■□□□□ 0.35
SHANK2-210ENST00000449116 NOL9Q5SY16 702 aaKnown RBP17.22■□□□□ 0.35
SHANK2-210ENST00000449116 SCYL3Q8IZE3 742 aa17.22■□□□□ 0.35
SHANK2-210ENST00000449116 LRRC2Q9BYS8 371 aa17.22■□□□□ 0.35
SHANK2-210ENST00000449116 GBA2Q9HCG7 927 aaPredicted RBP17.22■□□□□ 0.35
SHANK2-210ENST00000449116 TNKSO95271 1327 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 GREB1LQ9C091 1923 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-210ENST00000449116 PAPPA2Q9BXP8 1791 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 SH2B2O14492 632 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-210ENST00000449116 GUCY1A2P33402 732 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 FGD1P98174 961 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 FSTL1Q12841 308 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 SEPT2Q15019 361 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 TMEM67Q5HYA8 995 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-210ENST00000449116 Q6ZUG5 572 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 MOB2Q70IA6 237 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 FBXL16Q8N461 479 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 IGDCC4Q8TDY8 1250 aa17.21■□□□□ 0.35
SHANK2-210ENST00000449116 ZKSCAN4Q969J2 545 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms