RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CNTNAP4Q9C0A0 1308 aa17.07■□□□□ 0.32
SF1-211ENST00000448404 MYH13Q9UKX3 1938 aa17.07■□□□□ 0.32
SF1-211ENST00000448404 COBLO75128 1261 aa17.07■□□□□ 0.32
SF1-211ENST00000448404 PKN1Q16512 942 aa17.07■□□□□ 0.32
SF1-211ENST00000448404 STAMQ92783 540 aa17.07■□□□□ 0.32
SF1-211ENST00000448404 IFNKQ9P0W0 207 aa17.07■□□□□ 0.32
SF1-211ENST00000448404 PDE4BQ07343 736 aa17.06■□□□□ 0.32
SF1-211ENST00000448404 CACNA1SQ13698 1873 aa17.06■□□□□ 0.32
SF1-211ENST00000448404 DOCK2Q92608 1830 aa17.06■□□□□ 0.32
SF1-211ENST00000448404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
SF1-211ENST00000448404 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
SF1-211ENST00000448404 DPF2Q92785 391 aa17.06■□□□□ 0.32
SF1-211ENST00000448404 XPO4Q9C0E2 1151 aaKnown RBP17.06■□□□□ 0.32
SF1-211ENST00000448404 ARAP2Q8WZ64 1704 aa17.06■□□□□ 0.32
SF1-211ENST00000448404 BMP6P22004 513 aa17.06■□□□□ 0.32
SF1-211ENST00000448404 SLC10A5Q5PT55 438 aa17.06■□□□□ 0.32
SF1-211ENST00000448404 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
SF1-211ENST00000448404 SH3RF3Q8TEJ3 882 aaPredicted RBP17.06■□□□□ 0.32
SF1-211ENST00000448404 KCNH3Q9ULD8 1083 aa17.06■□□□□ 0.32
SF1-211ENST00000448404 USP17L3A6NCW0 530 aa17.05■□□□□ 0.32
SF1-211ENST00000448404 USP17L4A6NCW7 530 aa17.05■□□□□ 0.32
SF1-211ENST00000448404 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
SF1-211ENST00000448404 POLR2DO15514 142 aaKnown RBP17.05■□□□□ 0.32
SF1-211ENST00000448404 USP17L1Q7RTZ2 530 aa17.05■□□□□ 0.32
SF1-211ENST00000448404 RNF41Q9H4P4 317 aaPredicted RBP17.05■□□□□ 0.32
SF1-211ENST00000448404 PCDHA5Q9Y5H7 936 aa17.05■□□□□ 0.32
SF1-211ENST00000448404 TRMT44Q8IYL2 757 aaKnown RBP17.05■□□□□ 0.32
SF1-211ENST00000448404 SRBD1Q8N5C6 995 aaKnown RBP17.05■□□□□ 0.32
SF1-211ENST00000448404 EPSTI1Q96J88 318 aa17.05■□□□□ 0.32
SF1-211ENST00000448404 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 CHD4Q14839 1912 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 TROAPQ12815 778 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 NCAPHQ15003 741 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 ZNF174Q15697 407 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 TRAPPC3LQ5T215 181 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 CNNM3Q8NE01 707 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 RASGRP4Q8TDF6 673 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 ZNF592Q92610 1267 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 SERTAD1Q9UHV2 236 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 HPSEQ9Y251 543 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 A0A087X0B3 334 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 DEXIO95424 95 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 SLURP2P0DP57 97 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 FUT2Q10981 343 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 SAFBQ15424 915 aaKnown RBP eCLIP17.04■□□□□ 0.32
SF1-211ENST00000448404 GPKOWQ92917 476 aaPredicted RBP eCLIP17.04■□□□□ 0.323e-7■■□□□ 13
SF1-211ENST00000448404 SPTLC3Q9NUV7 552 aa17.04■□□□□ 0.32
SF1-211ENST00000448404 ZHX1Q9UKY1 873 aaPredicted RBP17.04■□□□□ 0.32
SF1-211ENST00000448404 COL5A3P25940 1745 aaPredicted RBP17.03■□□□□ 0.32
SF1-211ENST00000448404 CDC25AP30304 524 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 NAA30Q147X3 362 aaPredicted RBP17.03■□□□□ 0.32
SF1-211ENST00000448404 RESP18Q5W5W9 173 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 MAPKAPK5Q8IW41 473 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 STAG2Q8N3U4 1231 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
SF1-211ENST00000448404 MAP7D2Q96T17 732 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 CSRNP2Q9H175 543 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 HSD3B7Q9H2F3 369 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 TSPY2A6NKD2 308 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 TERF1P54274 439 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 TMC6Q7Z403 805 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 CNBD1Q8NA66 436 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
SF1-211ENST00000448404 FBXO2Q9UK22 296 aaPredicted RBP17.03■□□□□ 0.32
SF1-211ENST00000448404 GOLGA8HP0CJ92 632 aa17.02■□□□□ 0.32
SF1-211ENST00000448404 PLCD1P51178 756 aa17.02■□□□□ 0.32
SF1-211ENST00000448404 AKAP17AQ02040 695 aaKnown RBP17.02■□□□□ 0.32
SF1-211ENST00000448404 LRRC8AQ8IWT6 810 aa17.02■□□□□ 0.32
SF1-211ENST00000448404 KRI1Q8N9T8 703 aaKnown RBP17.02■□□□□ 0.32
SF1-211ENST00000448404 AFMP43652 599 aa17.02■□□□□ 0.31
SF1-211ENST00000448404 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.31
SF1-211ENST00000448404 IQCA1Q86XH1 822 aa17.02■□□□□ 0.31
SF1-211ENST00000448404 SEPT12Q8IYM1 358 aa17.02■□□□□ 0.31
SF1-211ENST00000448404 BCORQ6W2J9 1755 aa17.02■□□□□ 0.31
SF1-211ENST00000448404 TMEM232C9JQI7 657 aa17.01■□□□□ 0.31
SF1-211ENST00000448404 NLRP12P59046 1061 aa17.01■□□□□ 0.31
SF1-211ENST00000448404 GPSM2P81274 684 aa17.01■□□□□ 0.31
SF1-211ENST00000448404 PRR5LQ6MZQ0 368 aa17.01■□□□□ 0.31
SF1-211ENST00000448404 F8W031 263 aaPredicted RBP17.01■□□□□ 0.31
SF1-211ENST00000448404 RIOK3O14730 519 aaKnown RBP17.01■□□□□ 0.31
SF1-211ENST00000448404 SKILP12757 684 aa17.01■□□□□ 0.31
SF1-211ENST00000448404 USP5P45974 858 aa17.01■□□□□ 0.31
SF1-211ENST00000448404 KRBA2Q6ZNG9 492 aa17.01■□□□□ 0.31
SF1-211ENST00000448404 SMYD4Q8IYR2 804 aaPredicted RBP17.01■□□□□ 0.31
SF1-211ENST00000448404 GJD4Q96KN9 370 aaPredicted RBP17.01■□□□□ 0.31
SF1-211ENST00000448404 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
SF1-211ENST00000448404 RREB1Q92766 1687 aa17.01■□□□□ 0.31
SF1-211ENST00000448404 PPP6R2O75170 966 aa17■□□□□ 0.31
SF1-211ENST00000448404 TFAP4Q01664 338 aa17■□□□□ 0.31
SF1-211ENST00000448404 DHX58Q96C10 678 aa17■□□□□ 0.31
SF1-211ENST00000448404 CRNKL1Q9BZJ0 848 aaKnown RBP17■□□□□ 0.31
SF1-211ENST00000448404 IL17RBQ9NRM6 502 aa17■□□□□ 0.31
SF1-211ENST00000448404 ANAPC4Q9UJX5 808 aa17■□□□□ 0.31
SF1-211ENST00000448404 BTAF1O14981 1849 aa17■□□□□ 0.31
SF1-211ENST00000448404 TNRC6CQ9HCJ0 1690 aaKnown RBP17■□□□□ 0.31
SF1-211ENST00000448404 RCSD1Q6JBY9 416 aa17■□□□□ 0.31
SF1-211ENST00000448404 MXD3Q9BW11 206 aa17■□□□□ 0.31
SF1-211ENST00000448404 FANCLQ9NW38 375 aa17■□□□□ 0.31
SF1-211ENST00000448404 STK36Q9NRP7 1315 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms