RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 FAM13BQ9NYF5 915 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 CLIP2Q9UDT6 1046 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 TRPC5Q9UL62 973 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-218ENST00000439806 CEP131Q9UPN4 1083 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.02□□□□□ -0.49
CPNE1-218ENST00000439806 XDHP47989 1333 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 CDK5RAP2Q96SN8 1893 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 SMTNL1A8MU46 457 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 BTBD18B2RXH4 712 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 PRPF3O43395 683 aaKnown RBP12.01□□□□□ -0.49
CPNE1-218ENST00000439806 PRDM1O75626 825 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 LDHBP07195 334 aaKnown RBP12.01□□□□□ -0.49
CPNE1-218ENST00000439806 USP5P45974 858 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 RBM6P78332 1123 aaKnown RBP12.01□□□□□ -0.49
CPNE1-218ENST00000439806 SBK1Q52WX2 424 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 RESP18Q5W5W9 173 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 SHC4Q6S5L8 630 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 CCDC186Q7Z3E2 898 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 DHX40Q8IX18 779 aaKnown RBP12.01□□□□□ -0.49
CPNE1-218ENST00000439806 AMOTL1Q8IY63 956 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 CMTR1Q8N1G2 835 aaKnown RBP12.01□□□□□ -0.49
CPNE1-218ENST00000439806 KRI1Q8N9T8 703 aaKnown RBP12.01□□□□□ -0.49
CPNE1-218ENST00000439806 CTCFLQ8NI51 663 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-218ENST00000439806 ERCC4Q92889 916 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-218ENST00000439806 BPIFA3Q9BQP9 254 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-218ENST00000439806 KCNF1Q9H3M0 494 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 JAG2Q9Y219 1238 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 IRS2Q9Y4H2 1338 aa12.01□□□□□ -0.49
CPNE1-218ENST00000439806 A0A087WWV3 80 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 FAM237AA0A1B0GTK4 181 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 TSPY2A6NKD2 308 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 SMIM22K7EJ46 135 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 LDHCP07864 332 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 ATP2B4P23634 1241 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 KRT2P35908 639 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 TXNRD3Q86VQ6 643 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 MRFAP1L1Q96HT8 127 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 RBM17Q96I25 401 aaKnown RBP12□□□□□ -0.49
CPNE1-218ENST00000439806 EIF4ENIF1Q9NRA8 985 aaKnown RBP12□□□□□ -0.49
CPNE1-218ENST00000439806 HOOK1Q9UJC3 728 aaKnown RBP12□□□□□ -0.49
CPNE1-218ENST00000439806 HPSEQ9Y251 543 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 BRWD3Q6RI45 1802 aa12□□□□□ -0.49
CPNE1-218ENST00000439806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
CPNE1-218ENST00000439806 BIN1O00499 593 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 BAG3O95817 575 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 CYP2D6P10635 497 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 NT5C2P49902 561 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 DPCR1Q3MIW9 517 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 PRR5LQ6MZQ0 368 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 C15orf52Q6ZUT6 534 aaKnown RBP11.99□□□□□ -0.49
CPNE1-218ENST00000439806 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 CNNM3Q8NE01 707 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 KIAA1524Q8TCG1 905 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 CLIC6Q96NY7 704 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 SPTLC3Q9NUV7 552 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 MCM9Q9NXL9 1143 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 PYCARDQ9ULZ3 195 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 MYH1P12882 1939 aa11.99□□□□□ -0.49
CPNE1-218ENST00000439806 CNTNAP5Q8WYK1 1306 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 UQCRHLA0A096LP55 91 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 UFL1O94874 794 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 PLEKHA8P1O95397 391 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 SERPINB2P05120 415 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 UQCRHP07919 91 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 ATP2B1P20020 1258 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 KIF5BP33176 963 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 TOB1P50616 345 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-218ENST00000439806 NR5A1Q13285 461 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 CCDC178Q5BJE1 867 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 FAM47AQ5JRC9 791 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 OLFM4Q6UX06 510 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 AEBP2Q6ZN18 517 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-218ENST00000439806 KRBA2Q6ZNG9 492 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 C17orf53Q8N3J3 647 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-218ENST00000439806 VPS54Q9P1Q0 977 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 KCNH3Q9ULD8 1083 aa11.98□□□□□ -0.49
CPNE1-218ENST00000439806 LRRC37AA6NMS7 1700 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 TRIM75PA6NK02 468 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
CPNE1-218ENST00000439806 NEMFO60524 1076 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 BMP15O95972 392 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 USP17L8P0C7I0 530 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 PTPREP23469 700 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 GPSM2P81274 684 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 PKN1Q16512 942 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 CERS3Q8IU89 383 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 CERKQ8TCT0 537 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 OXER1Q8TDS5 423 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 PHF20Q9BVI0 1012 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 KAT14Q9H8E8 782 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 CABP5Q9NP86 173 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 LRRC4BQ9NT99 713 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 NRBP1Q9UHY1 535 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 TUBE1Q9UJT0 475 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 GGA1Q9UJY5 639 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 FBXO2Q9UK22 296 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms