RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PARP10Q53GL7 1025 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 FBXO38Q6PIJ6 1188 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 MICALCLQ6ZW33 695 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 ZSCAN29Q8IWY8 852 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 SLF2Q8IX21 1173 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 FMR1NBQ8N0W7 255 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 UBA5Q9GZZ9 404 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 PUS7LQ9H0K6 701 aaKnown RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 C6orf50Q9HD87 102 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 PTPRUQ92729 1446 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 ARHGEF28Q8N1W1 1705 aaKnown RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 PHLPP2Q6ZVD8 1323 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 MAP2P11137 1827 aaKnown RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 OPA1O60313 960 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 ATP1A3P13637 1013 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 PLCD1P51178 756 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 GSTO1P78417 241 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 SPATA1Q5VX52 437 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 SLF1Q9BQI6 1058 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 DENND2AQ9ULE3 1009 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 SHPRHQ149N8 1683 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 TMCO5BA8MYB1 307 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 PDE8BO95263 885 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 ADAMTS2O95450 1211 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 PHKA1P46020 1223 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 NAA30Q147X3 362 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 TCERG1LQ5VWI1 586 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 NBPF5PQ86XG9 351 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 AIFM3Q96NN9 605 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 DDX41Q9UJV9 622 aaKnown RBP7.53□□□□□ -1.2
CSDE1-205ENST00000438362 TSPOAP1O95153 1857 aa7.53□□□□□ -1.2
CSDE1-205ENST00000438362 ERCC5P28715 1186 aaPredicted RBP7.52□□□□□ -1.2
CSDE1-205ENST00000438362 GNA11P29992 359 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 ADD2P35612 726 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 PPP1R2P41236 205 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 PPARAQ07869 468 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 USPL1Q5W0Q7 1092 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 MAATS1Q7Z4T9 603 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 VSTM4Q8IW00 320 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 C10orf67Q8IYJ2 551 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 RABGGTAQ92696 567 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 SPAG5Q96R06 1193 aa7.52□□□□□ -1.2
CSDE1-205ENST00000438362 OSBPL5Q9H0X9 879 aaPredicted RBP7.52□□□□□ -1.2
CSDE1-205ENST00000438362 MACROD2A1Z1Q3 448 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 GOLGA8FQ08AF8 430 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 GOLGA8DPQ0D2H9 430 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 IQCB1Q15051 598 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 CSGALNACT2Q8N6G5 542 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSDE1-205ENST00000438362 NELFBQ8WX92 580 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 ACSBG1Q96GR2 724 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 GREM2Q9H772 168 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 GJB4Q9NTQ9 266 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 SH2B2O14492 632 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-205ENST00000438362 ATP8B1O43520 1251 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 CAPN15O75808 1086 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 IFFO1Q0D2I5 559 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 RNF187Q5TA31 235 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-205ENST00000438362 TAX1BP1Q86VP1 789 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 BBXQ8WY36 941 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-205ENST00000438362 NOC4LQ9BVI4 516 aaKnown RBP7.52□□□□□ -1.21
CSDE1-205ENST00000438362 BLZF1Q9H2G9 400 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 RASSF4Q9H2L5 321 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 FOXP1Q9H334 677 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-205ENST00000438362 TNKSO95271 1327 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 MROH1Q8NDA8 1641 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 IFNAR1P17181 557 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 CLCN6P51797 869 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 PDE4DQ08499 809 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 PTPN21Q16825 1174 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 LONRF3Q496Y0 759 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 KRT79Q5XKE5 535 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 STOX1Q6ZVD7 989 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 NEK11Q8NG66 645 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 JAKMIP2Q96AA8 810 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 TSGA10Q9BZW7 698 aa7.52□□□□□ -1.21
CSDE1-205ENST00000438362 BCCIPQ9P287 314 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSDE1-205ENST00000438362 HEG1Q9ULI3 1381 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 USP27XA6NNY8 438 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 EBAG9O00559 213 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 VAV2P52735 878 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 RBM5P52756 815 aaKnown RBP eCLIP7.51□□□□□ -1.21
CSDE1-205ENST00000438362 IFI16Q16666 785 aaKnown RBP7.51□□□□□ -1.21
CSDE1-205ENST00000438362 GIGYF2Q6Y7W6 1299 aaKnown RBP7.51□□□□□ -1.21
CSDE1-205ENST00000438362 CRACR2BQ8N4Y2 399 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-205ENST00000438362 OR8K1Q8NGG5 319 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 ENOX1Q8TC92 643 aaKnown RBP7.51□□□□□ -1.21
CSDE1-205ENST00000438362 KCNB2Q92953 911 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 NUP58Q9BVL2 599 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 TAF6LQ9Y6J9 622 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 FMNL1O95466 1100 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-205ENST00000438362 WHAMMP3Q1A5X7 153 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 LETM2Q2VYF4 491 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 FAM76AQ8TAV0 307 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 RRP36Q96EU6 259 aaKnown RBP7.51□□□□□ -1.21
CSDE1-205ENST00000438362 BPIFA3Q9BQP9 254 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 FUCA2Q9BTY2 467 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms