RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 GINM1Q9NU53 330 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 SERPINB13Q9UIV8 391 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 ZBTB21Q9ULJ3 1066 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 MAST2Q6P0Q8 1798 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 ZNF532Q9HCE3 1301 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 ZSWIM8A7E2V4 1837 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 C19orf81C9J6K1 198 aa16.14■□□□□ 0.17
EDEM1-202ENST00000434243 USP17L10C9JJH3 530 aa16.14■□□□□ 0.17
EDEM1-202ENST00000434243 GH2P01242 217 aa16.14■□□□□ 0.17
EDEM1-202ENST00000434243 GCLCP48506 637 aaPredicted RBP16.14■□□□□ 0.17
EDEM1-202ENST00000434243 FLT3LGP49771 235 aa16.14■□□□□ 0.17
EDEM1-202ENST00000434243 COA7Q96BR5 231 aa16.14■□□□□ 0.17
EDEM1-202ENST00000434243 RIOK1Q9BRS2 568 aaKnown RBP16.14■□□□□ 0.17
EDEM1-202ENST00000434243 CRNKL1Q9BZJ0 848 aaKnown RBP16.14■□□□□ 0.17
EDEM1-202ENST00000434243 LRRCC1Q9C099 1032 aa16.14■□□□□ 0.17
EDEM1-202ENST00000434243 SMARCA5O60264 1052 aaPredicted RBP16.13■□□□□ 0.17
EDEM1-202ENST00000434243 ADCY3O60266 1144 aa16.13■□□□□ 0.17
EDEM1-202ENST00000434243 RAB3GAP1Q15042 981 aa16.13■□□□□ 0.17
EDEM1-202ENST00000434243 ZYXQ15942 572 aaKnown RBP16.13■□□□□ 0.17
EDEM1-202ENST00000434243 FAM110CQ1W6H9 321 aa16.13■□□□□ 0.17
EDEM1-202ENST00000434243 CERKLQ49MI3 558 aaPredicted RBP16.13■□□□□ 0.17
EDEM1-202ENST00000434243 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
EDEM1-202ENST00000434243 FEZ1Q99689 392 aa16.13■□□□□ 0.17
EDEM1-202ENST00000434243 PAG1Q9NWQ8 432 aa16.13■□□□□ 0.17
EDEM1-202ENST00000434243 MCM9Q9NXL9 1143 aa16.13■□□□□ 0.17
EDEM1-202ENST00000434243 ATP5JP18859 108 aa16.12■□□□□ 0.17
EDEM1-202ENST00000434243 PLCD1P51178 756 aa16.12■□□□□ 0.17
EDEM1-202ENST00000434243 TATDN1Q6P1N9 297 aa16.12■□□□□ 0.17
EDEM1-202ENST00000434243 RNF208Q9H0X6 261 aa16.12■□□□□ 0.17
EDEM1-202ENST00000434243 EHD4Q9H223 541 aa16.12■□□□□ 0.17
EDEM1-202ENST00000434243 CABP5Q9NP86 173 aa16.12■□□□□ 0.17
EDEM1-202ENST00000434243 CCL5P13501 91 aa16.11■□□□□ 0.17
EDEM1-202ENST00000434243 ELNP15502 786 aa16.11■□□□□ 0.17
EDEM1-202ENST00000434243 ABCB5Q2M3G0 1257 aa16.11■□□□□ 0.17
EDEM1-202ENST00000434243 USP17L2Q6R6M4 530 aa16.11■□□□□ 0.17
EDEM1-202ENST00000434243 LCORLQ8N3X6 602 aa16.11■□□□□ 0.17
EDEM1-202ENST00000434243 NKX2-3Q8TAU0 364 aa16.11■□□□□ 0.17
EDEM1-202ENST00000434243 SDR42E1Q8WUS8 393 aa16.11■□□□□ 0.17
EDEM1-202ENST00000434243 P2RX7Q99572 595 aaKnown RBP16.11■□□□□ 0.17
EDEM1-202ENST00000434243 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.11■□□□□ 0.171e-14■■■□□ 17.1
EDEM1-202ENST00000434243 ARMT1Q9H993 441 aa16.11■□□□□ 0.17
EDEM1-202ENST00000434243 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
EDEM1-202ENST00000434243 MPHOSPH10O00566 681 aaKnown RBP16.1■□□□□ 0.17
EDEM1-202ENST00000434243 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
EDEM1-202ENST00000434243 HAUS7Q99871 368 aa16.1■□□□□ 0.17
EDEM1-202ENST00000434243 EMILIN3Q9NT22 766 aa16.1■□□□□ 0.17
EDEM1-202ENST00000434243 HOXA7P31268 230 aaPredicted RBP16.09■□□□□ 0.17
EDEM1-202ENST00000434243 ADD2P35612 726 aa16.09■□□□□ 0.17
EDEM1-202ENST00000434243 IRF5Q13568 498 aa16.09■□□□□ 0.17
EDEM1-202ENST00000434243 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
EDEM1-202ENST00000434243 UNC93B1Q9H1C4 597 aa16.09■□□□□ 0.17
EDEM1-202ENST00000434243 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
EDEM1-202ENST00000434243 MYO5AQ9Y4I1 1855 aaKnown RBP16.08■□□□□ 0.17
EDEM1-202ENST00000434243 PRKAB2O43741 272 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 PEX10O60683 326 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 MBD4O95243 580 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 INHAP05111 366 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 GJB1P08034 283 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 CYP2D6P10635 497 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 SHMT1P34896 483 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 HERVK_113P62684 666 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 GPRC5AQ8NFJ5 357 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 PXYLP1Q8TE99 480 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
EDEM1-202ENST00000434243 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
EDEM1-202ENST00000434243 GJA8P48165 433 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 USP14P54578 494 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 EVX2Q03828 476 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 ZSCAN25Q6NSZ9 544 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 ACER1Q8TDN7 264 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 DDRGK1Q96HY6 314 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 CWC22Q9HCG8 908 aaKnown RBP16.07■□□□□ 0.16
EDEM1-202ENST00000434243 ECHDC1Q9NTX5 307 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 MORF4L1Q9UBU8 362 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 SIPA1L1O43166 1804 aa16.07■□□□□ 0.16
EDEM1-202ENST00000434243 USP17L15C9J2P7 530 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 USP17L13C9JLJ4 530 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 USP17L11C9JVI0 530 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 USP17L18D6R9N7 530 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 USP17L22D6RA61 530 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 USP17L17D6RBQ6 530 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 USP17L19D6RCP7 530 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 USP17L20D6RJB6 530 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 CHGBP05060 677 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 USP17L24Q0WX57 530 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 SEPT2Q15019 361 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 AMOTL1Q8IY63 956 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 U2AF1L4Q8WU68 220 aaKnown RBP16.06■□□□□ 0.16
EDEM1-202ENST00000434243 GTF3C2Q8WUA4 911 aaPredicted RBP16.06■□□□□ 0.16
EDEM1-202ENST00000434243 SHISA4Q96DD7 197 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 TXNRD2Q9NNW7 524 aa16.06■□□□□ 0.16
EDEM1-202ENST00000434243 TFRCP02786 760 aaKnown RBP16.05■□□□□ 0.16
EDEM1-202ENST00000434243 CYP2B6P20813 491 aa16.05■□□□□ 0.16
EDEM1-202ENST00000434243 GABPAQ06546 454 aa16.05■□□□□ 0.16
EDEM1-202ENST00000434243 UBE3CQ15386 1083 aa16.05■□□□□ 0.16
EDEM1-202ENST00000434243 SLC44A5Q8NCS7 719 aa16.05■□□□□ 0.16
EDEM1-202ENST00000434243 DPF3Q92784 378 aa16.05■□□□□ 0.16
EDEM1-202ENST00000434243 GCC1Q96CN9 775 aa16.05■□□□□ 0.16
EDEM1-202ENST00000434243 DYNLL2Q96FJ2 89 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms