RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 PAPPA2Q9BXP8 1791 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 TMEM88BA6NKF7 163 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 PHF20L1A8MW92 1017 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 B4E1Z4 1266 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
CNOT9-205ENST00000433439 RASA1P20936 1047 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 HSPA4P34932 840 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 HUNKP57058 714 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 ABCB5Q2M3G0 1257 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 FAM47AQ5JRC9 791 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 TATDN1Q6P1N9 297 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 RASEFQ8IZ41 740 aa18.17■□□□□ 0.5
CNOT9-205ENST00000433439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.17■□□□□ 0.5
CNOT9-205ENST00000433439 UPF2Q9HAU5 1272 aaKnown RBP18.17■□□□□ 0.5
CNOT9-205ENST00000433439 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.17■□□□□ 0.5
CNOT9-205ENST00000433439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
CNOT9-205ENST00000433439 TSPY2A6NKD2 308 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 E7EWF7 191 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 GH2P01242 217 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 AKR1B1P15121 316 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 CAP2P40123 477 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 FKBP1BP68106 108 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 TRDNQ13061 729 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 VGLL4Q14135 290 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 STOX1Q6ZVD7 989 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 RALYLQ86SE5 291 aaKnown RBP18.16■□□□□ 0.5
CNOT9-205ENST00000433439 ANKRD13AQ8IZ07 590 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 CLMNQ96JQ2 1002 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 ELP3Q9H9T3 547 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 CABP5Q9NP86 173 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 PICK1Q9NRD5 415 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 ZNF112Q9UJU3 913 aa18.16■□□□□ 0.5
CNOT9-205ENST00000433439 EPB41L2O43491 1005 aaKnown RBP18.15■□□□□ 0.5
CNOT9-205ENST00000433439 CTNND1O60716 968 aaKnown RBP18.15■□□□□ 0.5
CNOT9-205ENST00000433439 TSPY3P0CV98 308 aa18.15■□□□□ 0.5
CNOT9-205ENST00000433439 TSPY8P0CW00 308 aa18.15■□□□□ 0.5
CNOT9-205ENST00000433439 JAG1P78504 1218 aa18.15■□□□□ 0.5
CNOT9-205ENST00000433439 TFAP4Q01664 338 aa18.15■□□□□ 0.5
CNOT9-205ENST00000433439 RAB3GAP1Q15042 981 aa18.15■□□□□ 0.5
CNOT9-205ENST00000433439 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.15■□□□□ 0.5
CNOT9-205ENST00000433439 PAXIP1Q6ZW49 1069 aaPredicted RBP18.15■□□□□ 0.5
CNOT9-205ENST00000433439 CCDC84Q86UT8 332 aaPredicted RBP18.15■□□□□ 0.5
CNOT9-205ENST00000433439 SCYL3Q8IZE3 742 aa18.15■□□□□ 0.5
CNOT9-205ENST00000433439 CCDC17Q96LX7 622 aa18.15■□□□□ 0.5
CNOT9-205ENST00000433439 SNX14Q9Y5W7 946 aa18.15■□□□□ 0.5
CNOT9-205ENST00000433439 ORC4O43929 436 aa18.14■□□□□ 0.49
CNOT9-205ENST00000433439 KDM4AO75164 1064 aa18.14■□□□□ 0.49
CNOT9-205ENST00000433439 HSPA1AP0DMV8 641 aaKnown RBP18.14■□□□□ 0.49
CNOT9-205ENST00000433439 HSPA1BP0DMV9 641 aaKnown RBP18.14■□□□□ 0.49
CNOT9-205ENST00000433439 PCP11498 1178 aaKnown RBP18.14■□□□□ 0.49
CNOT9-205ENST00000433439 MAP3K11Q16584 847 aa18.14■□□□□ 0.49
CNOT9-205ENST00000433439 NCOA7Q8NI08 942 aa18.14■□□□□ 0.49
CNOT9-205ENST00000433439 ESR2Q92731 530 aa18.14■□□□□ 0.49
CNOT9-205ENST00000433439 KRT23Q9C075 422 aa18.14■□□□□ 0.49
CNOT9-205ENST00000433439 CNNM2Q9H8M5 875 aa18.14■□□□□ 0.49
CNOT9-205ENST00000433439 ZBTB21Q9ULJ3 1066 aa18.14■□□□□ 0.49
CNOT9-205ENST00000433439 OTOFQ9HC10 1997 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 GRM1Q13255 1194 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 SEPT2Q15019 361 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 LDLRAD1Q5T700 205 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 CLEC10AQ8IUN9 316 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 NKX2-3Q8TAU0 364 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 SLC10A4Q96EP9 437 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 ZKSCAN3Q9BRR0 538 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 C22orf23Q9BZE7 217 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 TAOK2Q9UL54 1235 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 SNCAIPQ9Y6H5 919 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 TLL2Q9Y6L7 1015 aa18.13■□□□□ 0.49
CNOT9-205ENST00000433439 ATAD5Q96QE3 1844 aa18.12■□□□□ 0.49
CNOT9-205ENST00000433439 ASNSP08243 561 aa18.12■□□□□ 0.49
CNOT9-205ENST00000433439 FGRP09769 529 aa18.12■□□□□ 0.49
CNOT9-205ENST00000433439 MKRN3Q13064 507 aaKnown RBP18.12■□□□□ 0.49
CNOT9-205ENST00000433439 ADCK5Q3MIX3 580 aa18.12■□□□□ 0.49
CNOT9-205ENST00000433439 TMEM179Q6ZVK1 233 aa18.12■□□□□ 0.49
CNOT9-205ENST00000433439 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
CNOT9-205ENST00000433439 SAPCD2Q86UD0 394 aa18.12■□□□□ 0.49
CNOT9-205ENST00000433439 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
CNOT9-205ENST00000433439 JAKMIP1Q96N16 626 aaKnown RBP18.12■□□□□ 0.49
CNOT9-205ENST00000433439 DOCK1Q14185 1865 aa18.12■□□□□ 0.49
CNOT9-205ENST00000433439 NMT2O60551 498 aa18.11■□□□□ 0.49
CNOT9-205ENST00000433439 ZNF157P51786 506 aaPredicted RBP18.11■□□□□ 0.49
CNOT9-205ENST00000433439 KRT32Q14532 448 aa18.11■□□□□ 0.49
CNOT9-205ENST00000433439 NOL9Q5SY16 702 aaKnown RBP18.11■□□□□ 0.49
CNOT9-205ENST00000433439 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
CNOT9-205ENST00000433439 OTUD5Q96G74 571 aa18.11■□□□□ 0.49
CNOT9-205ENST00000433439 NEK1Q96PY6 1258 aa18.11■□□□□ 0.49
CNOT9-205ENST00000433439 USP17L5A8MUK1 530 aa18.1■□□□□ 0.49
CNOT9-205ENST00000433439 PTPRAP18433 802 aa18.1■□□□□ 0.49
CNOT9-205ENST00000433439 GUCY1A2P33402 732 aa18.1■□□□□ 0.49
CNOT9-205ENST00000433439 NEDD1Q8NHV4 660 aa18.1■□□□□ 0.49
CNOT9-205ENST00000433439 KCNB2Q92953 911 aa18.1■□□□□ 0.49
CNOT9-205ENST00000433439 OPTNQ96CV9 577 aa18.1■□□□□ 0.49
CNOT9-205ENST00000433439 CREBZFQ9NS37 354 aa18.1■□□□□ 0.49
CNOT9-205ENST00000433439 ZSWIM5Q9P217 1185 aa18.1■□□□□ 0.49
CNOT9-205ENST00000433439 ZHX2Q9Y6X8 837 aa18.1■□□□□ 0.49
CNOT9-205ENST00000433439 CPA1P15085 419 aa18.09■□□□□ 0.49
CNOT9-205ENST00000433439 ICA1Q05084 483 aa18.09■□□□□ 0.49
CNOT9-205ENST00000433439 TSGA10IPQ3SY00 556 aa18.09■□□□□ 0.49
CNOT9-205ENST00000433439 RGMBQ6NW40 437 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms