RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 DYNLL2Q96FJ2 89 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 MTA3Q9BTC8 594 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 V9GY48 417 aaPredicted RBP16.93■□□□□ 0.3
RFTN1-203ENST00000432519 FOXN1O15353 648 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 SLC3A2P08195 630 aaKnown RBP16.93■□□□□ 0.3
RFTN1-203ENST00000432519 SYKP43405 635 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 DZIP1Q86YF9 867 aaKnown RBP16.93■□□□□ 0.3
RFTN1-203ENST00000432519 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
RFTN1-203ENST00000432519 CRNKL1Q9BZJ0 848 aaKnown RBP16.93■□□□□ 0.3
RFTN1-203ENST00000432519 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
RFTN1-203ENST00000432519 MCM9Q9NXL9 1143 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 PDS5AQ29RF7 1337 aaKnown RBP16.92■□□□□ 0.3
RFTN1-203ENST00000432519 GOLGA6L19H0YKK7 550 aa16.92■□□□□ 0.3
RFTN1-203ENST00000432519 LONRF3Q496Y0 759 aa16.92■□□□□ 0.3
RFTN1-203ENST00000432519 RGS22Q8NE09 1264 aa16.92■□□□□ 0.3
RFTN1-203ENST00000432519 KIAA1524Q8TCG1 905 aa16.92■□□□□ 0.3
RFTN1-203ENST00000432519 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.92■□□□□ 0.3
RFTN1-203ENST00000432519 PNOCQ13519 176 aa16.92■□□□□ 0.3
RFTN1-203ENST00000432519 RESP18Q5W5W9 173 aa16.92■□□□□ 0.3
RFTN1-203ENST00000432519 FOXP4Q8IVH2 680 aaPredicted RBP16.92■□□□□ 0.3
RFTN1-203ENST00000432519 CABP5Q9NP86 173 aa16.92■□□□□ 0.3
RFTN1-203ENST00000432519 MKRN1Q9UHC7 482 aaKnown RBP16.92■□□□□ 0.3
RFTN1-203ENST00000432519 KIAA1551Q9HCM1 1747 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 CCDC88AQ3V6T2 1871 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 CCDC196A0A1B0GTZ2 297 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 BECN2A8MW95 431 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 USP49Q70CQ1 688 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 IQCA1Q86XH1 822 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 UBR3Q6ZT12 1888 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 RCSD1Q6JBY9 416 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 CEP57L1Q8IYX8 460 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 SRBD1Q8N5C6 995 aaKnown RBP16.91■□□□□ 0.3
RFTN1-203ENST00000432519 SLC44A5Q8NCS7 719 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 WASF1Q92558 559 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 CLIP2Q9UDT6 1046 aa16.91■□□□□ 0.3
RFTN1-203ENST00000432519 TRIM37O94972 964 aa16.9■□□□□ 0.3
RFTN1-203ENST00000432519 CAVIN2O95810 425 aa16.9■□□□□ 0.3
RFTN1-203ENST00000432519 SERPINB2P05120 415 aa16.9■□□□□ 0.3
RFTN1-203ENST00000432519 DDR1Q08345 913 aa16.9■□□□□ 0.3
RFTN1-203ENST00000432519 CATIPQ7Z7H3 387 aa16.9■□□□□ 0.3
RFTN1-203ENST00000432519 METTL16Q86W50 562 aaKnown RBP16.9■□□□□ 0.3
RFTN1-203ENST00000432519 RNF26Q9BY78 433 aaPredicted RBP16.9■□□□□ 0.3
RFTN1-203ENST00000432519 FOXP1Q9H334 677 aaPredicted RBP16.9■□□□□ 0.3
RFTN1-203ENST00000432519 ATP8A2Q9NTI2 1148 aa16.9■□□□□ 0.3
RFTN1-203ENST00000432519 LDHBP07195 334 aaKnown RBP16.9■□□□□ 0.3
RFTN1-203ENST00000432519 RCAN1P53805 252 aa16.9■□□□□ 0.3
RFTN1-203ENST00000432519 SAFBQ15424 915 aaKnown RBP eCLIP16.9■□□□□ 0.3
RFTN1-203ENST00000432519 NPY5RQ15761 445 aa16.9■□□□□ 0.3
RFTN1-203ENST00000432519 CACTINQ8WUQ7 758 aaKnown RBP16.9■□□□□ 0.3
RFTN1-203ENST00000432519 FBXO2Q9UK22 296 aaPredicted RBP16.9■□□□□ 0.3
RFTN1-203ENST00000432519 XDHP47989 1333 aa16.9■□□□□ 0.3
RFTN1-203ENST00000432519 ORC4O43929 436 aa16.89■□□□□ 0.29
RFTN1-203ENST00000432519 PROM2Q8N271 834 aa16.89■□□□□ 0.29
RFTN1-203ENST00000432519 IL17RBQ9NRM6 502 aa16.89■□□□□ 0.29
RFTN1-203ENST00000432519 TRPC5Q9UL62 973 aaPredicted RBP16.89■□□□□ 0.29
RFTN1-203ENST00000432519 CRY2Q49AN0 593 aa16.89■□□□□ 0.29
RFTN1-203ENST00000432519 SARM1Q6SZW1 724 aa16.89■□□□□ 0.29
RFTN1-203ENST00000432519 QTRT2Q9H974 415 aaKnown RBP16.89■□□□□ 0.29
RFTN1-203ENST00000432519 KCNH3Q9ULD8 1083 aa16.89■□□□□ 0.29
RFTN1-203ENST00000432519 LEMD3Q9Y2U8 911 aa16.89■□□□□ 0.29
RFTN1-203ENST00000432519 FAM237AA0A1B0GTK4 181 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 PLCD1P51178 756 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 TMTC3Q6ZXV5 915 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 TGFBRAP1Q8WUH2 860 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 RPGRQ92834 1020 aaKnown RBP16.88■□□□□ 0.29
RFTN1-203ENST00000432519 SPTLC3Q9NUV7 552 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 LAMB1P07942 1786 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 CNTNAP5Q8WYK1 1306 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 TSPY2A6NKD2 308 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 CUTAO60888 179 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 UFL1O94874 794 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 NCAPHQ15003 741 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 RASGRP2Q7LDG7 609 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 JMYQ8N9B5 988 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 KRI1Q8N9T8 703 aaKnown RBP16.88■□□□□ 0.29
RFTN1-203ENST00000432519 PHF20Q9BVI0 1012 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 ARPP21Q9UBL0 812 aaPredicted RBP16.88■□□□□ 0.29
RFTN1-203ENST00000432519 DLEC1Q9Y238 1755 aa16.88■□□□□ 0.29
RFTN1-203ENST00000432519 BMP6P22004 513 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 SBK1Q52WX2 424 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 C12orf60Q5U649 245 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 GRAMD1CQ8IYS0 662 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 HSD3B7Q9H2F3 369 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 SAP30BPQ9UHR5 308 aaKnown RBP16.87■□□□□ 0.29
RFTN1-203ENST00000432519 MAST2Q6P0Q8 1798 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 USP17L3A6NCW0 530 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 USP17L4A6NCW7 530 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 GOLGA6L6A8MZA4 724 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 PRPF3O43395 683 aaKnown RBP16.87■□□□□ 0.29
RFTN1-203ENST00000432519 PTPREP23469 700 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 USP5P45974 858 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 NLRP12P59046 1061 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 TFAP4Q01664 338 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 DNTTIP2Q5QJE6 756 aaKnown RBP16.87■□□□□ 0.29
RFTN1-203ENST00000432519 OLFM4Q6UX06 510 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 USP17L1Q7RTZ2 530 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 PDILTQ8N807 584 aa16.87■□□□□ 0.29
RFTN1-203ENST00000432519 CD209Q9NNX6 404 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms