RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 CEP85Q6P2H3 762 aa18.48■□□□□ 0.55
CSNK1E-208ENST00000431611 PAK6Q9NQU5 681 aaPredicted RBP18.48■□□□□ 0.55
CSNK1E-208ENST00000431611 MORF4L1Q9UBU8 362 aa18.48■□□□□ 0.55
CSNK1E-208ENST00000431611 ZBTB21Q9ULJ3 1066 aa18.48■□□□□ 0.55
CSNK1E-208ENST00000431611 NR2E3Q9Y5X4 410 aa18.48■□□□□ 0.55
CSNK1E-208ENST00000431611 MGAMO43451 1857 aa18.48■□□□□ 0.55
CSNK1E-208ENST00000431611 USP17L10C9JJH3 530 aa18.47■□□□□ 0.55
CSNK1E-208ENST00000431611 SHROOM1Q2M3G4 852 aaPredicted RBP18.47■□□□□ 0.55
CSNK1E-208ENST00000431611 CERS3Q8IU89 383 aa18.47■□□□□ 0.55
CSNK1E-208ENST00000431611 MIER1Q8N108 512 aa18.47■□□□□ 0.55
CSNK1E-208ENST00000431611 MIGA1Q8NAN2 632 aa18.47■□□□□ 0.55
CSNK1E-208ENST00000431611 P2RX7Q99572 595 aaKnown RBP18.47■□□□□ 0.55
CSNK1E-208ENST00000431611 GJD2Q9UKL4 321 aa18.47■□□□□ 0.55
CSNK1E-208ENST00000431611 LOC285556D6RIA3 1793 aa18.46■□□□□ 0.55
CSNK1E-208ENST00000431611 MAST2Q6P0Q8 1798 aa18.46■□□□□ 0.55
CSNK1E-208ENST00000431611 USP5P45974 858 aa18.46■□□□□ 0.55
CSNK1E-208ENST00000431611 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
CSNK1E-208ENST00000431611 MAGEB6Q8N7X4 407 aa18.46■□□□□ 0.55
CSNK1E-208ENST00000431611 CRISPLD2Q9H0B8 497 aa18.46■□□□□ 0.55
CSNK1E-208ENST00000431611 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.554e-8■■□□□ 12.3
CSNK1E-208ENST00000431611 EXOC6BQ9Y2D4 811 aa18.46■□□□□ 0.55
CSNK1E-208ENST00000431611 HMGCRP04035 888 aa18.45■□□□□ 0.54
CSNK1E-208ENST00000431611 HERVK_113P62684 666 aa18.45■□□□□ 0.54
CSNK1E-208ENST00000431611 MAP3K12Q12852 859 aa18.45■□□□□ 0.54
CSNK1E-208ENST00000431611 AACSQ86V21 672 aa18.45■□□□□ 0.54
CSNK1E-208ENST00000431611 GPRC5AQ8NFJ5 357 aa18.45■□□□□ 0.54
CSNK1E-208ENST00000431611 ANTXR1Q9H6X2 564 aa18.45■□□□□ 0.54
CSNK1E-208ENST00000431611 NDUFB9Q9Y6M9 179 aa18.45■□□□□ 0.54
CSNK1E-208ENST00000431611 GH2P01242 217 aa18.44■□□□□ 0.54
CSNK1E-208ENST00000431611 RBM27Q9P2N5 1060 aaKnown RBP18.44■□□□□ 0.54
CSNK1E-208ENST00000431611 EVI5O60447 810 aa18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 PEX10O60683 326 aa18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 TMED8Q6PL24 325 aaPredicted RBP18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 USP17L2Q6R6M4 530 aa18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 PAWRQ96IZ0 340 aaKnown RBP18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 TXNRD2Q9NNW7 524 aa18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 HMX1Q9NP08 348 aaPredicted RBP18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 RBPJLQ9UBG7 517 aa18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 SIPA1L1O43166 1804 aa18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 RPTORQ8N122 1335 aa18.43■□□□□ 0.54
CSNK1E-208ENST00000431611 ATAD5Q96QE3 1844 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 CYP2B6P20813 491 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 TRIM32Q13049 653 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 HSP90AB4PQ58FF6 505 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 TATDN1Q6P1N9 297 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 NECAB2Q7Z6G3 386 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 TTC6Q86TZ1 520 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 GTF3C2Q8WUA4 911 aaPredicted RBP18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 NUDT12Q9BQG2 462 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 EHD4Q9H223 541 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 IL1RAPL2Q9NP60 686 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 SERPINB13Q9UIV8 391 aa18.42■□□□□ 0.54
CSNK1E-208ENST00000431611 MAPK4P31152 587 aa18.41■□□□□ 0.54
CSNK1E-208ENST00000431611 CCAR1Q8IX12 1150 aaKnown RBP18.41■□□□□ 0.54
CSNK1E-208ENST00000431611 ANKLE1Q8NAG6 615 aa18.41■□□□□ 0.54
CSNK1E-208ENST00000431611 SOCS4Q8WXH5 440 aa18.41■□□□□ 0.54
CSNK1E-208ENST00000431611 TRIB2Q92519 343 aa18.41■□□□□ 0.54
CSNK1E-208ENST00000431611 FEZ1Q99689 392 aa18.41■□□□□ 0.54
CSNK1E-208ENST00000431611 MS4A1P11836 297 aa18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 XRCC5P13010 732 aaKnown RBP18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 ERVK-9P63128 1117 aa18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 ERVK-24P63145 666 aa18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 PDE3AQ14432 1141 aa18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 ZYXQ15942 572 aaKnown RBP18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 Q3C1V9 767 aa18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 RHPN1Q8TCX5 695 aa18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 PAGR1Q9BTK6 254 aa18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 PRO3102Q9H379 93 aa18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 ZBED9Q6R2W3 1325 aa18.4■□□□□ 0.54
CSNK1E-208ENST00000431611 RAB3GAP1Q15042 981 aa18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 TTF1Q15361 905 aaPredicted RBP18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 ABCB5Q2M3G0 1257 aa18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 CERKLQ49MI3 558 aaPredicted RBP18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 DIEXFQ68CQ4 756 aaKnown RBP18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 DIS3LQ8TF46 1054 aaKnown RBP18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 C12orf42Q96LP6 360 aa18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 RIOK1Q9BRS2 568 aaKnown RBP18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 PORCNQ9H237 461 aa18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 CABP5Q9NP86 173 aa18.39■□□□□ 0.53
CSNK1E-208ENST00000431611 MAGEB6P1A0A0J9YX57 407 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP17L15C9J2P7 530 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP17L13C9JLJ4 530 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP17L11C9JVI0 530 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP17L18D6R9N7 530 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP17L22D6RA61 530 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP17L17D6RBQ6 530 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP17L19D6RCP7 530 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP17L20D6RJB6 530 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 PLCD1P51178 756 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP14P54578 494 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 USP17L24Q0WX57 530 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 GPR142Q7Z601 462 aa18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 TRMT44Q8IYL2 757 aaKnown RBP18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 CLASRPQ8N2M8 674 aaKnown RBP18.38■□□□□ 0.53
CSNK1E-208ENST00000431611 APBB1O00213 710 aa18.37■□□□□ 0.53
CSNK1E-208ENST00000431611 POLR3DP05423 398 aaPredicted RBP18.37■□□□□ 0.53
CSNK1E-208ENST00000431611 PRKAR2AP13861 404 aaKnown RBP18.37■□□□□ 0.53
CSNK1E-208ENST00000431611 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms