RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 AFAP1L1Q8TED9 768 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 DRC1Q96MC2 740 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 NID2Q14112 1375 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 RBBP6Q7Z6E9 1792 aaKnown RBP5.83□□□□□ -1.48
RIF1-203ENST00000428287 TTC3P53804 2025 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 FOXP2O15409 715 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 MYCNP04198 464 aaPredicted RBP5.83□□□□□ -1.48
RIF1-203ENST00000428287 NTRK3Q16288 839 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 ANKRD18AQ8IVF6 992 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 TAF1LQ8IZX4 1826 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 AKR1B15C9JRZ8 316 aaPredicted RBP5.83□□□□□ -1.48
RIF1-203ENST00000428287 ELF1P32519 619 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 MORC3Q14149 939 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 KSR2Q6VAB6 950 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 HAUS4Q9H6D7 363 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 HPS5Q9UPZ3 1129 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 CACNA1SQ13698 1873 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 LAMB2P55268 1798 aa5.83□□□□□ -1.48
RIF1-203ENST00000428287 METP08581 1390 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 CCDC102BQ68D86 513 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 C3orf20Q8ND61 904 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 DDX54Q8TDD1 881 aaKnown RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 BATF3Q9NR55 127 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 FXR1P51114 621 aaKnown RBP eCLIP5.82□□□□□ -1.48
RIF1-203ENST00000428287 CUL4BQ13620 913 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 NBPF9Q3BBW0 867 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 FNBP4Q8N3X1 1017 aaPredicted RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 LSP1P33241 339 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 GRIK3Q13003 919 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 LONRF3Q496Y0 759 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 CRELD2Q6UXH1 353 aaPredicted RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 TOGARAM2Q6ZUX3 1019 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 TEX11Q8IYF3 940 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 MREGQ8N565 214 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 CCDC148Q8NFR7 591 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 C8orf76Q96K31 380 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 TRIM6Q9C030 488 aaPredicted RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 ZMYM6O95789 1325 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 ANKRD65E5RJM6 399 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 KIF23Q02241 960 aaPredicted RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 GRIPAP1Q4V328 841 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 VEZTQ9HBM0 779 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 SLC12A6Q9UHW9 1150 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 DMGDHQ9UI17 866 aaKnown RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 SUFUQ9UMX1 484 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 SERPINC1P01008 464 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 TLDC1Q6P9B6 456 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 LRP10Q7Z4F1 713 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 AENQ8WTP8 325 aaKnown RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 PURBQ96QR8 312 aaKnown RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 SCN9AQ15858 1988 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 HNRNPH3P31942 346 aaKnown RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 INPP5BP32019 993 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 MEA1Q16626 185 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 ALS2CLQ60I27 953 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.82□□□□□ -1.48
RIF1-203ENST00000428287 SH3RF1Q7Z6J0 888 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 MAP3K14Q99558 947 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 DDX21Q9NR30 783 aaKnown RBP eCLIP5.82□□□□□ -1.48
RIF1-203ENST00000428287 KCNG1Q9UIX4 513 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 ABCC12Q96J65 1359 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 ADAMTS13Q76LX8 1427 aa5.82□□□□□ -1.48
RIF1-203ENST00000428287 TFRCP02786 760 aaKnown RBP5.81□□□□□ -1.48
RIF1-203ENST00000428287 ZMYM1Q5SVZ6 1142 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 TATDN2Q93075 761 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 HOOK2Q96ED9 719 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 NBPF3Q9H094 633 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 BOLA2Q9H3K6 86 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 KAT14Q9H8E8 782 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 BSDC1Q9NW68 430 aaPredicted RBP5.81□□□□□ -1.48
RIF1-203ENST00000428287 WWC3Q9ULE0 1092 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 MYO6Q9UM54 1294 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 ANO9A1A5B4 782 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 MFAP3LO75121 409 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 PAEPP09466 180 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 TNFRSF8P28908 595 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 CCT5P48643 541 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 RIPK1Q13546 671 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 SGMS1Q86VZ5 419 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 SLC35F6Q8N357 371 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 ZKSCAN4Q969J2 545 aaPredicted RBP5.81□□□□□ -1.48
RIF1-203ENST00000428287 CLIC4Q9Y696 253 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 FAM107AO95990 144 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 RFX5P48382 616 aaPredicted RBP5.81□□□□□ -1.48
RIF1-203ENST00000428287 LMNB2Q03252 620 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 STK38Q15208 465 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 SPATA1Q5VX52 437 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 FBXW10Q5XX13 1052 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.81□□□□□ -1.488e-7■■■■■ 32.1
RIF1-203ENST00000428287 CAVIN3Q969G5 261 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 NAPGQ99747 312 aaPredicted RBP5.81□□□□□ -1.48
RIF1-203ENST00000428287 MCM8Q9UJA3 840 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 EPN1Q9Y6I3 576 aaPredicted RBP5.81□□□□□ -1.48
RIF1-203ENST00000428287 UTRNP46939 3433 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 IGKV5-2P06315 115 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 ADKP55263 362 aaKnown RBP5.81□□□□□ -1.48
RIF1-203ENST00000428287 SF3A1Q15459 793 aaKnown RBP5.81□□□□□ -1.48
RIF1-203ENST00000428287 FAM228AQ86W67 206 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 PSMD1Q99460 953 aa5.81□□□□□ -1.48
RIF1-203ENST00000428287 DESI2Q9BSY9 194 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms