RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 SFRP5Q5T4F7 317 aa8.53□□□□□ -1.04
LINC00458-202ENST00000427299 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
LINC00458-202ENST00000427299 HDXQ7Z353 690 aa8.53□□□□□ -1.04
LINC00458-202ENST00000427299 NPAS4Q8IUM7 802 aa8.53□□□□□ -1.04
LINC00458-202ENST00000427299 KIRREL1Q96J84 757 aa8.53□□□□□ -1.04
LINC00458-202ENST00000427299 MIPEPQ99797 713 aa8.53□□□□□ -1.04
LINC00458-202ENST00000427299 FAM8A1Q9UBU6 413 aa8.53□□□□□ -1.04
LINC00458-202ENST00000427299 TPX2Q9ULW0 747 aaKnown RBP8.53□□□□□ -1.04
LINC00458-202ENST00000427299 ST14Q9Y5Y6 855 aa8.53□□□□□ -1.04
LINC00458-202ENST00000427299 USP17L7P0C7H9 530 aa8.52□□□□□ -1.05
LINC00458-202ENST00000427299 GDNFP39905 211 aa8.52□□□□□ -1.05
LINC00458-202ENST00000427299 FGD1P98174 961 aa8.52□□□□□ -1.05
LINC00458-202ENST00000427299 CDKAL1Q5VV42 579 aa8.52□□□□□ -1.05
LINC00458-202ENST00000427299 ZSCAN29Q8IWY8 852 aaPredicted RBP8.52□□□□□ -1.05
LINC00458-202ENST00000427299 MFSD2AQ8NA29 543 aa8.52□□□□□ -1.05
LINC00458-202ENST00000427299 ASB16Q96NS5 453 aa8.52□□□□□ -1.05
LINC00458-202ENST00000427299 SPG7Q9UQ90 795 aa8.52□□□□□ -1.05
LINC00458-202ENST00000427299 H3BS24 57 aa8.51□□□□□ -1.05
LINC00458-202ENST00000427299 RAP1GAPP47736 663 aa8.51□□□□□ -1.05
LINC00458-202ENST00000427299 PRR23BQ6ZRT6 265 aa8.51□□□□□ -1.05
LINC00458-202ENST00000427299 RIN3Q8TB24 985 aa8.51□□□□□ -1.05
LINC00458-202ENST00000427299 PPP1R16BQ96T49 567 aa8.51□□□□□ -1.05
LINC00458-202ENST00000427299 SNCAIPQ9Y6H5 919 aa8.51□□□□□ -1.05
LINC00458-202ENST00000427299 CDK8P49336 464 aa8.5□□□□□ -1.05
LINC00458-202ENST00000427299 WIPI1Q5MNZ9 446 aaPredicted RBP8.5□□□□□ -1.05
LINC00458-202ENST00000427299 LETMD1Q6P1Q0 360 aa8.5□□□□□ -1.05
LINC00458-202ENST00000427299 SV2BQ7L1I2 683 aa8.5□□□□□ -1.05
LINC00458-202ENST00000427299 THAP5Q7Z6K1 395 aa8.5□□□□□ -1.05
LINC00458-202ENST00000427299 C1QL4Q86Z23 238 aa8.5□□□□□ -1.05
LINC00458-202ENST00000427299 CFPP27918 469 aa8.49□□□□□ -1.05
LINC00458-202ENST00000427299 ETF1P62495 437 aaKnown RBP8.49□□□□□ -1.05
LINC00458-202ENST00000427299 ATP2B2Q01814 1243 aa8.49□□□□□ -1.05
LINC00458-202ENST00000427299 TMEM67Q5HYA8 995 aa8.49□□□□□ -1.05
LINC00458-202ENST00000427299 MPZL3Q6UWV2 235 aa8.49□□□□□ -1.05
LINC00458-202ENST00000427299 HID1Q8IV36 788 aa8.49□□□□□ -1.05
LINC00458-202ENST00000427299 TOX2Q96NM4 488 aa8.49□□□□□ -1.05
LINC00458-202ENST00000427299 CST3P01034 146 aaPredicted RBP8.48□□□□□ -1.05
LINC00458-202ENST00000427299 KRT1P04264 644 aa8.48□□□□□ -1.05
LINC00458-202ENST00000427299 PRAMEF13Q5VWM6 474 aa8.48□□□□□ -1.05
LINC00458-202ENST00000427299 TTBK2Q6IQ55 1244 aa8.48□□□□□ -1.05
LINC00458-202ENST00000427299 ZNF746Q6NUN9 644 aaPredicted RBP8.48□□□□□ -1.05
LINC00458-202ENST00000427299 KRTAP4-11Q9BYQ6 195 aa8.48□□□□□ -1.05
LINC00458-202ENST00000427299 KRTAP9-7A8MTY7 169 aa8.47□□□□□ -1.05
LINC00458-202ENST00000427299 SYDE1Q6ZW31 735 aaPredicted RBP8.47□□□□□ -1.05
LINC00458-202ENST00000427299 ALPK1Q96QP1 1244 aa8.47□□□□□ -1.05
LINC00458-202ENST00000427299 RBAK-RBAKDNI3L0D1 243 aa8.46□□□□□ -1.06
LINC00458-202ENST00000427299 P4HBP07237 508 aaKnown RBP8.46□□□□□ -1.06
LINC00458-202ENST00000427299 GRK4P32298 578 aa8.46□□□□□ -1.06
LINC00458-202ENST00000427299 UBE2FQ969M7 185 aa8.46□□□□□ -1.06
LINC00458-202ENST00000427299 COX4I2Q96KJ9 171 aa8.46□□□□□ -1.06
LINC00458-202ENST00000427299 TTF2Q9UNY4 1162 aaKnown RBP8.46□□□□□ -1.06
LINC00458-202ENST00000427299 GFRA2O00451 464 aa8.45□□□□□ -1.06
LINC00458-202ENST00000427299 CBX7O95931 251 aa8.45□□□□□ -1.06
LINC00458-202ENST00000427299 KIR3DL1P43629 444 aa8.45□□□□□ -1.06
LINC00458-202ENST00000427299 RPS26P62854 115 aaKnown RBP8.45□□□□□ -1.06
LINC00458-202ENST00000427299 LCNL1Q6ZST4 164 aa8.45□□□□□ -1.06
LINC00458-202ENST00000427299 LRRC56Q8IYG6 542 aaPredicted RBP8.45□□□□□ -1.06
LINC00458-202ENST00000427299 CCDC120Q96HB5 630 aa8.45□□□□□ -1.06
LINC00458-202ENST00000427299 TACC3Q9Y6A5 838 aa8.45□□□□□ -1.06
LINC00458-202ENST00000427299 TNK2Q07912 1038 aa8.44□□□□□ -1.06
LINC00458-202ENST00000427299 XAGE3Q8WTP9 111 aa8.44□□□□□ -1.06
LINC00458-202ENST00000427299 FRMD6Q96NE9 622 aa8.44□□□□□ -1.06
LINC00458-202ENST00000427299 C1QTNF9P0C862 333 aa8.43□□□□□ -1.06
LINC00458-202ENST00000427299 SEPT6Q14141 434 aa8.43□□□□□ -1.06
LINC00458-202ENST00000427299 ANKLE2Q86XL3 938 aa8.43□□□□□ -1.06
LINC00458-202ENST00000427299 FBXO15Q8NCQ5 510 aaPredicted RBP8.43□□□□□ -1.06
LINC00458-202ENST00000427299 ZSCAN18Q8TBC5 510 aaPredicted RBP8.43□□□□□ -1.06
LINC00458-202ENST00000427299 DIRC2Q96SL1 478 aa8.43□□□□□ -1.06
LINC00458-202ENST00000427299 TRAIPQ9BWF2 469 aa8.43□□□□□ -1.06
LINC00458-202ENST00000427299 NSUN3Q9H649 340 aaKnown RBP8.43□□□□□ -1.06
LINC00458-202ENST00000427299 SLAMF8Q9P0V8 285 aa8.43□□□□□ -1.06
LINC00458-202ENST00000427299 ZSWIM5Q9P217 1185 aa8.43□□□□□ -1.06
LINC00458-202ENST00000427299 IVNS1ABPQ9Y6Y0 642 aa8.43□□□□□ -1.06
LINC00458-202ENST00000427299 ESR1P03372 595 aa8.42□□□□□ -1.06
LINC00458-202ENST00000427299 LDHBP07195 334 aaKnown RBP8.42□□□□□ -1.06
LINC00458-202ENST00000427299 CYP7A1P22680 504 aa8.42□□□□□ -1.06
LINC00458-202ENST00000427299 MRPL41Q8IXM3 137 aaKnown RBP8.42□□□□□ -1.06
LINC00458-202ENST00000427299 TJP2Q9UDY2 1190 aa8.42□□□□□ -1.06
LINC00458-202ENST00000427299 PCDHB5Q9Y5E4 795 aa8.42□□□□□ -1.06
LINC00458-202ENST00000427299 DNAJC25-GNG10A0A024R161 153 aa8.41□□□□□ -1.06
LINC00458-202ENST00000427299 GNA15P30679 374 aa8.41□□□□□ -1.06
LINC00458-202ENST00000427299 CCDC85BQ15834 202 aaPredicted RBP8.41□□□□□ -1.06
LINC00458-202ENST00000427299 TMPRSS7Q7RTY8 843 aa8.41□□□□□ -1.06
LINC00458-202ENST00000427299 TTC6Q86TZ1 520 aa8.41□□□□□ -1.06
LINC00458-202ENST00000427299 CDH24Q86UP0 819 aa8.41□□□□□ -1.06
LINC00458-202ENST00000427299 SIAH1Q8IUQ4 282 aa8.41□□□□□ -1.06
LINC00458-202ENST00000427299 PIWIL2Q8TC59 973 aaKnown RBP8.41□□□□□ -1.06
LINC00458-202ENST00000427299 ZCCHC6Q5VYS8 1495 aaKnown RBP8.4□□□□□ -1.06
LINC00458-202ENST00000427299 EIF4BP23588 611 aaKnown RBP8.4□□□□□ -1.06
LINC00458-202ENST00000427299 RALGPS1Q5JS13 557 aa8.4□□□□□ -1.06
LINC00458-202ENST00000427299 AGMOQ6ZNB7 445 aa8.4□□□□□ -1.06
LINC00458-202ENST00000427299 ABHD4Q8TB40 342 aa8.4□□□□□ -1.06
LINC00458-202ENST00000427299 DPH2Q9BQC3 489 aaPredicted RBP8.4□□□□□ -1.06
LINC00458-202ENST00000427299 NFIBO00712 420 aa8.39□□□□□ -1.07
LINC00458-202ENST00000427299 PDIA4P13667 645 aaKnown RBP8.39□□□□□ -1.07
LINC00458-202ENST00000427299 RAC2P15153 192 aa8.39□□□□□ -1.07
LINC00458-202ENST00000427299 DNAJB8Q8NHS0 232 aa8.39□□□□□ -1.07
LINC00458-202ENST00000427299 TMEM87BQ96K49 555 aa8.39□□□□□ -1.07
LINC00458-202ENST00000427299 Q96M66 194 aa8.39□□□□□ -1.07
LINC00458-202ENST00000427299 TMEM59LQ9UK28 342 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms