RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 FRMPD3Q5JV73 1810 aa19.72■□□□□ 0.75
COL18A1-205ENST00000423214 GDF11O95390 407 aa19.71■□□□□ 0.75
COL18A1-205ENST00000423214 ERC1Q8IUD2 1116 aa19.71■□□□□ 0.75
COL18A1-205ENST00000423214 WDR18Q9BV38 432 aa19.71■□□□□ 0.75
COL18A1-205ENST00000423214 DNAJC18Q9H819 358 aa19.71■□□□□ 0.75
COL18A1-205ENST00000423214 ZBTB7BO15156 539 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-205ENST00000423214 SGPL1O95470 568 aa19.7■□□□□ 0.74
COL18A1-205ENST00000423214 BACE1P56817 501 aa19.7■□□□□ 0.74
COL18A1-205ENST00000423214 DYNLL1P63167 89 aaKnown RBP19.7■□□□□ 0.74
COL18A1-205ENST00000423214 CERS3Q8IU89 383 aa19.7■□□□□ 0.74
COL18A1-205ENST00000423214 FOXP4Q8IVH2 680 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-205ENST00000423214 GINM1Q9NU53 330 aa19.7■□□□□ 0.74
COL18A1-205ENST00000423214 ZBTB21Q9ULJ3 1066 aa19.7■□□□□ 0.74
COL18A1-205ENST00000423214 USP5P45974 858 aa19.69■□□□□ 0.74
COL18A1-205ENST00000423214 FXR1P51114 621 aaKnown RBP eCLIP19.69■□□□□ 0.74
COL18A1-205ENST00000423214 CEP85Q6P2H3 762 aa19.69■□□□□ 0.74
COL18A1-205ENST00000423214 CHRDL2Q6WN34 429 aa19.69■□□□□ 0.74
COL18A1-205ENST00000423214 UBE2Q1Q7Z7E8 422 aa19.69■□□□□ 0.74
COL18A1-205ENST00000423214 MIGA1Q8NAN2 632 aa19.69■□□□□ 0.74
COL18A1-205ENST00000423214 EAF2Q96CJ1 260 aaPredicted RBP19.69■□□□□ 0.74
COL18A1-205ENST00000423214 DEFB118Q96PH6 123 aa19.69■□□□□ 0.74
COL18A1-205ENST00000423214 C19orf81C9J6K1 198 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 USP17L10C9JJH3 530 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 TFRCP02786 760 aaKnown RBP19.68■□□□□ 0.74
COL18A1-205ENST00000423214 HMGCRP04035 888 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 CAPN2P17655 700 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 AACSQ86V21 672 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 METTL16Q86W50 562 aaKnown RBP19.68■□□□□ 0.74
COL18A1-205ENST00000423214 MAGEB6Q8N7X4 407 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 MORF4L1Q9UBU8 362 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 EXOC6BQ9Y2D4 811 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 NR2E3Q9Y5X4 410 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 ZBED9Q6R2W3 1325 aa19.68■□□□□ 0.74
COL18A1-205ENST00000423214 BAZ2AQ9UIF9 1905 aaKnown RBP19.68■□□□□ 0.74
COL18A1-205ENST00000423214 MAP3K12Q12852 859 aa19.67■□□□□ 0.74
COL18A1-205ENST00000423214 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.67■□□□□ 0.746e-6■■■■□ 26
COL18A1-205ENST00000423214 PAK6Q9NQU5 681 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-205ENST00000423214 HERVK_113P62684 666 aa19.66■□□□□ 0.74
COL18A1-205ENST00000423214 SHROOM1Q2M3G4 852 aaPredicted RBP19.66■□□□□ 0.74
COL18A1-205ENST00000423214 HSP90AB4PQ58FF6 505 aa19.66■□□□□ 0.74
COL18A1-205ENST00000423214 FEZ1Q99689 392 aa19.66■□□□□ 0.74
COL18A1-205ENST00000423214 NDUFB9Q9Y6M9 179 aa19.66■□□□□ 0.74
COL18A1-205ENST00000423214 HOXA7P31268 230 aaPredicted RBP19.65■□□□□ 0.74
COL18A1-205ENST00000423214 JAG1P78504 1218 aa19.65■□□□□ 0.74
COL18A1-205ENST00000423214 TMED8Q6PL24 325 aaPredicted RBP19.65■□□□□ 0.74
COL18A1-205ENST00000423214 CCAR1Q8IX12 1150 aaKnown RBP19.65■□□□□ 0.74
COL18A1-205ENST00000423214 GTF3C2Q8WUA4 911 aaPredicted RBP19.65■□□□□ 0.74
COL18A1-205ENST00000423214 GH2P01242 217 aa19.64■□□□□ 0.73
COL18A1-205ENST00000423214 PDE3AQ14432 1141 aa19.64■□□□□ 0.73
COL18A1-205ENST00000423214 PANK1Q8TE04 598 aa19.64■□□□□ 0.73
COL18A1-205ENST00000423214 SOCS4Q8WXH5 440 aa19.64■□□□□ 0.73
COL18A1-205ENST00000423214 ANTXR1Q9H6X2 564 aa19.64■□□□□ 0.73
COL18A1-205ENST00000423214 SERPINB13Q9UIV8 391 aa19.64■□□□□ 0.73
COL18A1-205ENST00000423214 EVI5O60447 810 aa19.63■□□□□ 0.73
COL18A1-205ENST00000423214 MS4A1P11836 297 aa19.63■□□□□ 0.73
COL18A1-205ENST00000423214 TTF1Q15361 905 aaPredicted RBP19.63■□□□□ 0.73
COL18A1-205ENST00000423214 ZYXQ15942 572 aaKnown RBP19.63■□□□□ 0.73
COL18A1-205ENST00000423214 USP17L2Q6R6M4 530 aa19.63■□□□□ 0.73
COL18A1-205ENST00000423214 TTC6Q86TZ1 520 aa19.63■□□□□ 0.73
COL18A1-205ENST00000423214 GPRC5AQ8NFJ5 357 aa19.63■□□□□ 0.73
COL18A1-205ENST00000423214 P2RX7Q99572 595 aaKnown RBP19.63■□□□□ 0.73
COL18A1-205ENST00000423214 PAGR1Q9BTK6 254 aa19.63■□□□□ 0.73
COL18A1-205ENST00000423214 CRISPLD2Q9H0B8 497 aa19.63■□□□□ 0.73
COL18A1-205ENST00000423214 EHD4Q9H223 541 aa19.63■□□□□ 0.73
COL18A1-205ENST00000423214 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
COL18A1-205ENST00000423214 HMX1Q9NP08 348 aaPredicted RBP19.63■□□□□ 0.73
COL18A1-205ENST00000423214 IL1RAPL2Q9NP60 686 aa19.63■□□□□ 0.73
COL18A1-205ENST00000423214 RPTORQ8N122 1335 aa19.62■□□□□ 0.73
COL18A1-205ENST00000423214 NUDT12Q9BQG2 462 aa19.62■□□□□ 0.73
COL18A1-205ENST00000423214 GJD2Q9UKL4 321 aa19.62■□□□□ 0.73
COL18A1-205ENST00000423214 RANBP2P49792 3224 aaKnown RBP19.62■□□□□ 0.73
COL18A1-205ENST00000423214 APBB1O00213 710 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 CYP2B6P20813 491 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 MAPK4P31152 587 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 ERVK-9P63128 1117 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 ERVK-24P63145 666 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 RAB3GAP1Q15042 981 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 NECAB2Q7Z6G3 386 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 CLASRPQ8N2M8 674 aaKnown RBP19.61■□□□□ 0.73
COL18A1-205ENST00000423214 ANKLE1Q8NAG6 615 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 RHPN1Q8TCX5 695 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 TRIB2Q92519 343 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 PAWRQ96IZ0 340 aaKnown RBP19.61■□□□□ 0.73
COL18A1-205ENST00000423214 TXNRD2Q9NNW7 524 aa19.61■□□□□ 0.73
COL18A1-205ENST00000423214 RBM27Q9P2N5 1060 aaKnown RBP19.61■□□□□ 0.73
COL18A1-205ENST00000423214 PARP14Q460N5 1801 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 A0A0G2JMZ2 1700 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 MAGEB6P1A0A0J9YX57 407 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 HMMRO75330 724 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 USP14P54578 494 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 TRIM32Q13049 653 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 ABCB5Q2M3G0 1257 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 CERKLQ49MI3 558 aaPredicted RBP19.6■□□□□ 0.73
COL18A1-205ENST00000423214 TATDN1Q6P1N9 297 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 CRNKL1Q9BZJ0 848 aaKnown RBP19.6■□□□□ 0.73
COL18A1-205ENST00000423214 BCL11AQ9H165 835 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 CABP5Q9NP86 173 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 EMILIN3Q9NT22 766 aa19.6■□□□□ 0.73
COL18A1-205ENST00000423214 PEX10O60683 326 aa19.59■□□□□ 0.73
COL18A1-205ENST00000423214 POLR3DP05423 398 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms