RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PPIL2Q13356 520 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
ATG4B-207ENST00000415107 IMMTQ16891 758 aaKnown RBP14.17□□□□□ -0.14
ATG4B-207ENST00000415107 CERKLQ49MI3 558 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-207ENST00000415107 SPRYD7Q5W111 196 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 KIAA1211Q6ZU35 1233 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 DNAJC5GQ8N7S2 189 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 STAG1Q8WVM7 1258 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 ZKSCAN4Q969J2 545 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-207ENST00000415107 SLC10A4Q96EP9 437 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 DYNLL2Q96FJ2 89 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 WNK4Q96J92 1243 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 CLMNQ96JQ2 1002 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 CAPNS2Q96L46 248 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 RNF41Q9H4P4 317 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-207ENST00000415107 PICK1Q9NRD5 415 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 ZBTB21Q9ULJ3 1066 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 KCNH4Q9UQ05 1017 aa14.17□□□□□ -0.14
ATG4B-207ENST00000415107 SMIM22K7EJ46 135 aa14.16□□□□□ -0.14
ATG4B-207ENST00000415107 REC8O95072 547 aa14.16□□□□□ -0.14
ATG4B-207ENST00000415107 RASA1P20936 1047 aa14.16□□□□□ -0.14
ATG4B-207ENST00000415107 MAP2K2P36507 400 aa14.16□□□□□ -0.14
ATG4B-207ENST00000415107 PTH1RQ03431 593 aa14.16□□□□□ -0.14
ATG4B-207ENST00000415107 TMEM179Q6ZVK1 233 aa14.16□□□□□ -0.14
ATG4B-207ENST00000415107 SLC44A5Q8NCS7 719 aa14.16□□□□□ -0.14
ATG4B-207ENST00000415107 OPTNQ96CV9 577 aa14.16□□□□□ -0.14
ATG4B-207ENST00000415107 WDR18Q9BV38 432 aa14.16□□□□□ -0.14
ATG4B-207ENST00000415107 WDR33Q9C0J8 1336 aaKnown RBP14.15□□□□□ -0.14
ATG4B-207ENST00000415107 PTPRFP10586 1907 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 TESPA1A2RU30 521 aaPredicted RBP14.15□□□□□ -0.14
ATG4B-207ENST00000415107 CXCL11O14625 94 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 ZNF213O14771 459 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 GJA5P36382 358 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 NECTIN1Q15223 517 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 ABCB5Q2M3G0 1257 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 SLC4A8Q2Y0W8 1093 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 AKNAD1Q5T1N1 836 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 NBPF3Q9H094 633 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 ELP3Q9H9T3 547 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 AS3MTQ9HBK9 375 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 SYNPO2Q9UMS6 1093 aa14.15□□□□□ -0.14
ATG4B-207ENST00000415107 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 MANSC4A6NHS7 340 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-207ENST00000415107 USP17L5A8MUK1 530 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 VEGFBP49765 207 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 INHBEP58166 350 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 HTRA3P83110 453 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 CYP4F22Q6NT55 531 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 CABP5Q9NP86 173 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 ANO2Q9NQ90 1003 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 AFG3L2Q9Y4W6 797 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 LOC285556D6RIA3 1793 aa14.14□□□□□ -0.15
ATG4B-207ENST00000415107 IRF6O14896 467 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 GDF11O95390 407 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 GH2P01242 217 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 CYP21A2P08686 494 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 GUCY1A2P33402 732 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 NOVP48745 357 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 GTF2A2P52657 109 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 JAG1P78504 1218 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 TSGA10IPQ3SY00 556 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 SH3D19Q5HYK7 790 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 PPP4R3BQ5MIZ7 849 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 MFSD6Q6ZSS7 791 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 TBC1D10CQ8IV04 446 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 JMYQ8N9B5 988 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 ZNF280CQ8ND82 737 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 NEDD1Q8NHV4 660 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 KCNB2Q92953 911 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 MS4A4AQ96JQ5 239 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.13□□□□□ -0.15
ATG4B-207ENST00000415107 CNNM2Q9H8M5 875 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 MKNK2Q9HBH9 465 aa14.13□□□□□ -0.15
ATG4B-207ENST00000415107 ZCCHC17Q9NP64 241 aaKnown RBP14.13□□□□□ -0.15
ATG4B-207ENST00000415107 RBM8AQ9Y5S9 174 aaKnown RBP14.13□□□□□ -0.15
ATG4B-207ENST00000415107 A0A0G2JLL6 359 aaPredicted RBP14.12□□□□□ -0.15
ATG4B-207ENST00000415107 AKR1B1P15121 316 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 TM4SF4P48230 202 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 SREBF2Q12772 1141 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 SNAPC2Q13487 334 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 PRRT2Q7Z6L0 340 aaPredicted RBP14.12□□□□□ -0.15
ATG4B-207ENST00000415107 ZNF444Q8N0Y2 327 aaPredicted RBP14.12□□□□□ -0.15
ATG4B-207ENST00000415107 OTUD5Q96G74 571 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 C12orf42Q96LP6 360 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 KANSL2Q9H9L4 492 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 TCP11L1Q9NUJ3 509 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 TACC3Q9Y6A5 838 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 ZHX2Q9Y6X8 837 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 CEP350Q5VT06 3117 aa14.12□□□□□ -0.15
ATG4B-207ENST00000415107 C19orf81C9J6K1 198 aa14.11□□□□□ -0.15
ATG4B-207ENST00000415107 HAND2P61296 217 aa14.11□□□□□ -0.15
ATG4B-207ENST00000415107 RNF20Q5VTR2 975 aa14.11□□□□□ -0.15
ATG4B-207ENST00000415107 PROCA1Q8NCQ7 364 aaPredicted RBP14.11□□□□□ -0.15
ATG4B-207ENST00000415107 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
ATG4B-207ENST00000415107 MTA3Q9BTC8 594 aa14.11□□□□□ -0.15
ATG4B-207ENST00000415107 CFHR5Q9BXR6 569 aa14.11□□□□□ -0.15
ATG4B-207ENST00000415107 KRT23Q9C075 422 aa14.11□□□□□ -0.15
ATG4B-207ENST00000415107 KIAA1683Q9H0B3 1180 aa14.11□□□□□ -0.15
ATG4B-207ENST00000415107 NYAP2Q9P242 653 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms