RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 COL17A1Q9UMD9 1497 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P23-201ENST00000414981 F6X3S4 739 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 GREM1O60565 184 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 CEACAM5P06731 702 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 MPP2Q14168 576 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 ZNF746Q6NUN9 644 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 C22orf34Q6ZV56 151 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 HS2ST1Q7LGA3 356 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 TP53INP2Q8IXH6 220 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 TMEM87AQ8NBN3 555 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 TMEM87BQ96K49 555 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 COX4I2Q96KJ9 171 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 PAK6Q9NQU5 681 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 PRDM5Q9NQX1 630 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 GGT7Q9UJ14 662 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 U3KQE9 123 aa6.25□□□□□ -1.41
HMGB3P23-201ENST00000414981 CYP7A1P22680 504 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 EIF4A3P38919 411 aaKnown RBP6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 IRAK1P51617 712 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 BNIP3Q12983 259 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 SNAP47Q5SQN1 464 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 PRAMEF13Q5VWM6 474 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 LETMD1Q6P1Q0 360 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 FBXL19Q6PCT2 694 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 FAM196AQ6ZSG2 479 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 FLCNQ8NFG4 579 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 RIN3Q8TB24 985 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 ACSF2Q96CM8 615 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 MIPEPQ99797 713 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 BACH2Q9BYV9 841 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 ADGRE2Q9UHX3 823 aa6.24□□□□□ -1.41
HMGB3P23-201ENST00000414981 GNAT3A8MTJ3 354 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 PLCG1P19174 1290 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 VAMP1P23763 118 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 FAM160A1Q05DH4 1040 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 AOC3Q16853 763 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 NKPD1Q17RQ9 610 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 SFRP5Q5T4F7 317 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 SPRED2Q7Z698 418 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 ZNF296Q8WUU4 475 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 HRASLS5Q96KN8 279 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 LRRC3Q9BY71 257 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 METTL5Q9NRN9 209 aaKnown RBP6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 TPX2Q9ULW0 747 aaKnown RBP6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 CEP131Q9UPN4 1083 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 SUPT16HQ9Y5B9 1047 aaKnown RBP6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 CORINQ9Y5Q5 1042 aa6.23□□□□□ -1.41
HMGB3P23-201ENST00000414981 ZNF865P0CJ78 1059 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 YARSP54577 528 aaKnown RBP6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 CBLL1Q75N03 491 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 REC114Q7Z4M0 266 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 WFDC3Q8IUB2 231 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 SPACA3Q8IXA5 215 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 ABI1Q8IZP0 508 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 ASB11Q8WXH4 323 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 CNTNAP4Q9C0A0 1308 aa6.22□□□□□ -1.41
HMGB3P23-201ENST00000414981 CD8BP10966 210 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 KIR3DL1P43629 444 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 CLCN7P51798 805 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 CWF19L2Q2TBE0 894 aaKnown RBP6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 CDH24Q86UP0 819 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 SLFN12Q8IYM2 578 aa6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 POLR3KQ9Y2Y1 108 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P23-201ENST00000414981 UPK3BL1B0FP48 263 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 UPK3BL2E5RIL1 263 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ATE1O95260 518 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 TAL1P17542 331 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ITIH2P19823 946 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 FUT4P22083 530 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ZNF76P36508 570 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ETV3P41162 512 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 MCTP1Q6DN14 999 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 FBXO27Q8NI29 283 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 XAGE3Q8WTP9 111 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 NT5C1AQ9BXI3 368 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 REV1Q9UBZ9 1251 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 ADAMTS1Q9UHI8 967 aa6.2□□□□□ -1.42
HMGB3P23-201ENST00000414981 HTR3BO95264 441 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 MLECQ14165 292 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 ZNF574Q6ZN55 896 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 FAM13CQ8NE31 585 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 DNAJB8Q8NHS0 232 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 PPP1R13LQ8WUF5 828 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 CYB5D2Q8WUJ1 264 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 EHMT1Q9H9B1 1298 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 LMCD1Q9NZU5 365 aa6.19□□□□□ -1.42
HMGB3P23-201ENST00000414981 PRR33A8MZF0 331 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 FAM155AB1AL88 458 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 CHURC1-FNTBB4DL54 471 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 GRIN3BO60391 1043 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 FANCCQ00597 558 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 ANGEL2Q5VTE6 544 aaKnown RBP6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 THAP5Q7Z6K1 395 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 REXO1Q8N1G1 1221 aaKnown RBP6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 MFSD4AQ8N468 514 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 RGS22Q8NE09 1264 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 PIWIL2Q8TC59 973 aaKnown RBP6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 RNF34Q969K3 372 aa6.18□□□□□ -1.42
HMGB3P23-201ENST00000414981 HSPA12BQ96MM6 686 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms