RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TRIM35Q9UPQ4 493 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 RILPL1Q5EBL4 403 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 JADE1Q6IE81 842 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 GBP6Q6ZN66 633 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 ANKRD35Q8N283 1001 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 VAV2P52735 878 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 KRT33BQ14525 404 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 CCDC26Q8TAB7 109 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 WDR66Q8TBY9 1149 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 CYP2J2P51589 502 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 VCX3BQ9H321 246 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 WDR7Q9Y4E6 1490 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 DOK7Q18PE1 504 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 TRIM50Q86XT4 487 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 HDAC11Q96DB2 347 aa20.52■□□□□ 0.88
SHANK3-202ENST00000414786 TTC31Q49AM3 519 aaPredicted RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 TTC6Q86TZ1 520 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 PDZD8Q8NEN9 1154 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 INPP5FQ9Y2H2 1132 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 H7C1D1 291 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 IL2RBP14784 551 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 SRGAP1Q7Z6B7 1085 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 SULF1Q8IWU6 871 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 HINFPQ9BQA5 517 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 CSRNP2Q9H175 543 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 EXOC3O60645 756 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 SYNDIG1Q9H7V2 258 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ZRANB1Q9UGI0 708 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 IFNB1P01574 187 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ZNF513Q8N8E2 541 aaPredicted RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ABT1Q9ULW3 272 aaKnown RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 BUB1BO60566 1050 aaPredicted RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 ATP6V1E1P36543 226 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 SLC1A4P43007 532 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 RAB3IPQ96QF0 476 aaPredicted RBP20.51■□□□□ 0.87
SHANK3-202ENST00000414786 EFCC1Q9HA90 598 aa20.51■□□□□ 0.87
SHANK3-202ENST00000414786 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.51■□□□□ 0.871e-6■■■■□ 24.5
SHANK3-202ENST00000414786 RNF113AO15541 343 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 TACO1Q9BSH4 297 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 SCNN1DP51172 638 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 TBC1D8BQ0IIM8 1120 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 FAM47AQ5JRC9 791 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 BICC1Q9H694 974 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 LMCD1Q9NZU5 365 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 CCDC62Q6P9F0 684 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 RSAD2Q8WXG1 361 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 BMP15O95972 392 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 PDE6AP16499 860 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 ZNF654Q8IZM8 581 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 ABI1Q8IZP0 508 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 SPDL1Q96EA4 605 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 GDAP1L1Q96MZ0 367 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 NCKAP5LQ9HCH0 1330 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 MUM1L1Q5H9M0 696 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 SZRD1Q7Z422 152 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 CCDC105Q8IYK2 499 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 V9GY48 417 aaPredicted RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 ALAS1P13196 640 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 HIBADHP31937 336 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 THRAP3Q9Y2W1 955 aaKnown RBP20.5■□□□□ 0.87
SHANK3-202ENST00000414786 PAXBP1Q9Y5B6 917 aa20.5■□□□□ 0.87
SHANK3-202ENST00000414786 I3L4J1 428 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.49■□□□□ 0.87
SHANK3-202ENST00000414786 UHMK1Q8TAS1 419 aaKnown RBP20.49■□□□□ 0.87
SHANK3-202ENST00000414786 ARHGAP42A6NI28 874 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 ABCB4P21439 1286 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 ANKRD2Q9GZV1 360 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 BLZF1Q9H2G9 400 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 CEP104O60308 925 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 IVLP07476 585 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 TIMM10P62072 90 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 ZBTB41Q5SVQ8 909 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 CMTR1Q8N1G2 835 aaKnown RBP20.49■□□□□ 0.87
SHANK3-202ENST00000414786 MORC4Q8TE76 937 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 NCAPGQ9BPX3 1015 aa20.49■□□□□ 0.87
SHANK3-202ENST00000414786 EBAG9O00559 213 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 BAG2O95816 211 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 LRFN2Q9ULH4 789 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 CUX1P39880 1505 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 SPECC1L-ADORA2AF8WAN1 911 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 UBL4BQ8N7F7 174 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 ZNF467Q7Z7K2 595 aaPredicted RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 FAM76AQ8TAV0 307 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 SPAG1Q07617 926 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 HERC4Q5GLZ8 1057 aaPredicted RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 GABPB2Q8TAK5 448 aaPredicted RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 EXOC7Q9UPT5 735 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 IL15P40933 162 aaPredicted RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 RNASELQ05823 741 aaKnown RBP20.48■□□□□ 0.87
SHANK3-202ENST00000414786 KRT222Q8N1A0 295 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 PCDHB13Q9Y5F0 798 aa20.48■□□□□ 0.87
SHANK3-202ENST00000414786 HACE1Q8IYU2 909 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 PPP4R1Q8TF05 950 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 DEPTORQ8TB45 409 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms