RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 IRX3P78415 501 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-210ENST00000409954 TATDN1Q6P1N9 297 aa17.63■□□□□ 0.41
MCF2L-210ENST00000409954 EHD4Q9H223 541 aa17.63■□□□□ 0.41
MCF2L-210ENST00000409954 DNAJC18Q9H819 358 aa17.63■□□□□ 0.41
MCF2L-210ENST00000409954 SERPINB13Q9UIV8 391 aa17.63■□□□□ 0.41
MCF2L-210ENST00000409954 JAG1P78504 1218 aa17.62■□□□□ 0.41
MCF2L-210ENST00000409954 MTMR2Q13614 643 aa17.62■□□□□ 0.41
MCF2L-210ENST00000409954 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
MCF2L-210ENST00000409954 SLC9C2Q5TAH2 1124 aa17.62■□□□□ 0.41
MCF2L-210ENST00000409954 SIRT2Q8IXJ6 389 aa17.62■□□□□ 0.41
MCF2L-210ENST00000409954 MORF4L1Q9UBU8 362 aa17.62■□□□□ 0.41
MCF2L-210ENST00000409954 ZBTB21Q9ULJ3 1066 aa17.62■□□□□ 0.41
MCF2L-210ENST00000409954 NDUFB9Q9Y6M9 179 aa17.62■□□□□ 0.41
MCF2L-210ENST00000409954 DOCK2Q92608 1830 aa17.62■□□□□ 0.41
MCF2L-210ENST00000409954 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
MCF2L-210ENST00000409954 SGPL1O95470 568 aa17.61■□□□□ 0.41
MCF2L-210ENST00000409954 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
MCF2L-210ENST00000409954 GTF3C2Q8WUA4 911 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-210ENST00000409954 P2RX7Q99572 595 aaKnown RBP17.61■□□□□ 0.41
MCF2L-210ENST00000409954 CABP5Q9NP86 173 aa17.61■□□□□ 0.41
MCF2L-210ENST00000409954 PCDH10Q9P2E7 1040 aa17.61■□□□□ 0.41
MCF2L-210ENST00000409954 APBB1O00213 710 aa17.6■□□□□ 0.41
MCF2L-210ENST00000409954 GDF11O95390 407 aa17.6■□□□□ 0.41
MCF2L-210ENST00000409954 CERKLQ49MI3 558 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-210ENST00000409954 GPRC5AQ8NFJ5 357 aa17.6■□□□□ 0.41
MCF2L-210ENST00000409954 U2AF1L4Q8WU68 220 aaKnown RBP17.6■□□□□ 0.41
MCF2L-210ENST00000409954 RIOK1Q9BRS2 568 aaKnown RBP17.6■□□□□ 0.41
MCF2L-210ENST00000409954 CRNKL1Q9BZJ0 848 aaKnown RBP17.6■□□□□ 0.41
MCF2L-210ENST00000409954 GJD2Q9UKL4 321 aa17.6■□□□□ 0.41
MCF2L-210ENST00000409954 TAOK2Q9UL54 1235 aa17.6■□□□□ 0.41
MCF2L-210ENST00000409954 GH2P01242 217 aa17.59■□□□□ 0.41
MCF2L-210ENST00000409954 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-210ENST00000409954 USP14P54578 494 aa17.59■□□□□ 0.41
MCF2L-210ENST00000409954 HTATIP2Q9BUP3 242 aa17.59■□□□□ 0.41
MCF2L-210ENST00000409954 UNC93B1Q9H1C4 597 aa17.59■□□□□ 0.41
MCF2L-210ENST00000409954 EMILIN3Q9NT22 766 aa17.59■□□□□ 0.41
MCF2L-210ENST00000409954 GOLIM4O00461 696 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 TFRCP02786 760 aaKnown RBP17.58■□□□□ 0.4
MCF2L-210ENST00000409954 INHAP05111 366 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 ELNP15502 786 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 PDE6AP16499 860 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 ATP5JP18859 108 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 HERVK_113P62684 666 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 ABCB5Q2M3G0 1257 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 DPF3Q92784 378 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 SHISA4Q96DD7 197 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 DOCK1Q14185 1865 aa17.58■□□□□ 0.4
MCF2L-210ENST00000409954 HTTP42858 3142 aa17.57■□□□□ 0.4
MCF2L-210ENST00000409954 ZNF532Q9HCE3 1301 aa17.57■□□□□ 0.4
MCF2L-210ENST00000409954 PLCD1P51178 756 aa17.57■□□□□ 0.4
MCF2L-210ENST00000409954 HABP4Q5JVS0 413 aaKnown RBP17.57■□□□□ 0.4
MCF2L-210ENST00000409954 UBE2Q1Q7Z7E8 422 aa17.57■□□□□ 0.4
MCF2L-210ENST00000409954 CCAR1Q8IX12 1150 aaKnown RBP17.57■□□□□ 0.4
MCF2L-210ENST00000409954 C12orf42Q96LP6 360 aa17.57■□□□□ 0.4
MCF2L-210ENST00000409954 DNAJC2Q99543 621 aaKnown RBP17.57■□□□□ 0.4
MCF2L-210ENST00000409954 KIAA1683Q9H0B3 1180 aa17.57■□□□□ 0.4
MCF2L-210ENST00000409954 RBPJLQ9UBG7 517 aa17.57■□□□□ 0.4
MCF2L-210ENST00000409954 RBBP6Q7Z6E9 1792 aaKnown RBP17.57■□□□□ 0.4
MCF2L-210ENST00000409954 USP17L15C9J2P7 530 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 USP17L13C9JLJ4 530 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 USP17L11C9JVI0 530 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 USP17L18D6R9N7 530 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 USP17L22D6RA61 530 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 USP17L17D6RBQ6 530 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 USP17L19D6RCP7 530 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 USP17L20D6RJB6 530 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 MAPK4P31152 587 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 USP17L24Q0WX57 530 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 RAB3GAP1Q15042 981 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 TRMT44Q8IYL2 757 aaKnown RBP17.56■□□□□ 0.4
MCF2L-210ENST00000409954 NUDT12Q9BQG2 462 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.56■□□□□ 0.4
MCF2L-210ENST00000409954 BOLA2Q9H3K6 86 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 PAG1Q9NWQ8 432 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 MCM9Q9NXL9 1143 aa17.56■□□□□ 0.4
MCF2L-210ENST00000409954 TCRBV5S4A2TA0A5A2 114 aa17.55■□□□□ 0.4
MCF2L-210ENST00000409954 HMGCRP04035 888 aa17.55■□□□□ 0.4
MCF2L-210ENST00000409954 XRCC5P13010 732 aaKnown RBP17.55■□□□□ 0.4
MCF2L-210ENST00000409954 GABPAQ06546 454 aa17.55■□□□□ 0.4
MCF2L-210ENST00000409954 DEFB118Q96PH6 123 aa17.55■□□□□ 0.4
MCF2L-210ENST00000409954 FEZ1Q99689 392 aa17.55■□□□□ 0.4
MCF2L-210ENST00000409954 LRRCC1Q9C099 1032 aa17.55■□□□□ 0.4
MCF2L-210ENST00000409954 PAK6Q9NQU5 681 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-210ENST00000409954 NR2E3Q9Y5X4 410 aa17.55■□□□□ 0.4
MCF2L-210ENST00000409954 PHIPQ8WWQ0 1821 aa17.55■□□□□ 0.4
MCF2L-210ENST00000409954 RPTORQ8N122 1335 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 SHMT1P34896 483 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 ERVK-9P63128 1117 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 ERVK-24P63145 666 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 SHROOM1Q2M3G4 852 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-210ENST00000409954 Q3C1V9 767 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 ZSCAN25Q6NSZ9 544 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 CATSPERGQ6ZRH7 1159 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 SOCS4Q8WXH5 440 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 HAUS7Q99871 368 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 BCL11AQ9H165 835 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 HMX1Q9NP08 348 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-210ENST00000409954 DCP1AQ9NPI6 582 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-210ENST00000409954 ATP8A2Q9NTI2 1148 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 SWAP70Q9UH65 585 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms