RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 RNGTTO60942 597 aaKnown RBP9.89□□□□□ -0.83
PTPN12-202ENST00000407343 CST3P01034 146 aaPredicted RBP9.89□□□□□ -0.83
PTPN12-202ENST00000407343 SSBP05455 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
PTPN12-202ENST00000407343 USP11P51784 963 aa9.89□□□□□ -0.83
PTPN12-202ENST00000407343 SLC6A19Q695T7 634 aa9.89□□□□□ -0.83
PTPN12-202ENST00000407343 KCT2Q8NC54 265 aa9.89□□□□□ -0.83
PTPN12-202ENST00000407343 UBXN4Q92575 508 aa9.89□□□□□ -0.83
PTPN12-202ENST00000407343 DPH2Q9BQC3 489 aaPredicted RBP9.89□□□□□ -0.83
PTPN12-202ENST00000407343 TPSG1Q9NRR2 321 aa9.89□□□□□ -0.83
PTPN12-202ENST00000407343 PROCP04070 461 aa9.88□□□□□ -0.83
PTPN12-202ENST00000407343 NME1P15531 152 aaKnown RBP9.88□□□□□ -0.83
PTPN12-202ENST00000407343 GTF2F1P35269 517 aaKnown RBP eCLIP9.88□□□□□ -0.83
PTPN12-202ENST00000407343 PRAMEF13Q5VWM6 474 aa9.88□□□□□ -0.83
PTPN12-202ENST00000407343 TMEM151AQ8N4L1 468 aa9.88□□□□□ -0.83
PTPN12-202ENST00000407343 TAB3Q8N5C8 712 aaPredicted RBP9.88□□□□□ -0.83
PTPN12-202ENST00000407343 GATA6Q92908 595 aa9.88□□□□□ -0.83
PTPN12-202ENST00000407343 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
PTPN12-202ENST00000407343 USP35Q9P2H5 1018 aa9.88□□□□□ -0.83
PTPN12-202ENST00000407343 KLHL3Q9UH77 587 aa9.88□□□□□ -0.83
PTPN12-202ENST00000407343 DAGLAQ9Y4D2 1042 aa9.88□□□□□ -0.83
PTPN12-202ENST00000407343 TNFRSF10CO14798 259 aa9.87□□□□□ -0.83
PTPN12-202ENST00000407343 KLF4O43474 513 aa9.87□□□□□ -0.83
PTPN12-202ENST00000407343 LRRFIP1Q32MZ4 808 aaKnown RBP9.87□□□□□ -0.83
PTPN12-202ENST00000407343 ARSHQ5FYA8 562 aa9.87□□□□□ -0.83
PTPN12-202ENST00000407343 FBXW10Q5XX13 1052 aa9.87□□□□□ -0.83
PTPN12-202ENST00000407343 ARMCX6Q7L4S7 300 aa9.87□□□□□ -0.83
PTPN12-202ENST00000407343 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPN12-202ENST00000407343 OR6P1Q8NGX9 317 aa9.87□□□□□ -0.83
PTPN12-202ENST00000407343 PRKAG3Q9UGI9 489 aa9.87□□□□□ -0.83
PTPN12-202ENST00000407343 COL17A1Q9UMD9 1497 aaPredicted RBP9.86□□□□□ -0.83
PTPN12-202ENST00000407343 RBAK-RBAKDNI3L0D1 243 aa9.86□□□□□ -0.83
PTPN12-202ENST00000407343 SMAD7O15105 426 aaKnown RBP9.86□□□□□ -0.83
PTPN12-202ENST00000407343 DHX15O43143 795 aaKnown RBP9.86□□□□□ -0.83
PTPN12-202ENST00000407343 BEND4Q6ZU67 534 aa9.86□□□□□ -0.83
PTPN12-202ENST00000407343 NLRC3Q7RTR2 1065 aa9.86□□□□□ -0.83
PTPN12-202ENST00000407343 FAM13CQ8NE31 585 aa9.86□□□□□ -0.83
PTPN12-202ENST00000407343 PPP1R13LQ8WUF5 828 aa9.86□□□□□ -0.83
PTPN12-202ENST00000407343 CPLX3Q8WVH0 158 aa9.86□□□□□ -0.83
PTPN12-202ENST00000407343 TP53INP1Q96A56 240 aa9.86□□□□□ -0.83
PTPN12-202ENST00000407343 FOXQ1Q9C009 403 aa9.86□□□□□ -0.83
PTPN12-202ENST00000407343 TNKS2Q9H2K2 1166 aa9.86□□□□□ -0.83
PTPN12-202ENST00000407343 PPP1R1BQ9UD71 204 aaPredicted RBP9.86□□□□□ -0.83
PTPN12-202ENST00000407343 FAM95CA0A1B0GW59 222 aa9.85□□□□□ -0.83
PTPN12-202ENST00000407343 LRIG2O94898 1065 aa9.85□□□□□ -0.83
PTPN12-202ENST00000407343 POLR2BP30876 1174 aaKnown RBP9.85□□□□□ -0.83
PTPN12-202ENST00000407343 CASP7P55210 303 aa9.85□□□□□ -0.83
PTPN12-202ENST00000407343 ZYXQ15942 572 aaKnown RBP9.85□□□□□ -0.83
PTPN12-202ENST00000407343 CDC37L1Q7L3B6 337 aa9.85□□□□□ -0.83
PTPN12-202ENST00000407343 C19orf47Q8N9M1 422 aaKnown RBP9.85□□□□□ -0.83
PTPN12-202ENST00000407343 SLC9A7Q96T83 725 aa9.85□□□□□ -0.83
PTPN12-202ENST00000407343 TM9SF2Q99805 663 aa9.85□□□□□ -0.83
PTPN12-202ENST00000407343 FAM83CQ9BQN1 747 aa9.85□□□□□ -0.83
PTPN12-202ENST00000407343 LGR6Q9HBX8 967 aa9.85□□□□□ -0.83
PTPN12-202ENST00000407343 STK10O94804 968 aaKnown RBP9.84□□□□□ -0.83
PTPN12-202ENST00000407343 CDK5R2Q13319 367 aa9.84□□□□□ -0.83
PTPN12-202ENST00000407343 MAP7Q14244 749 aa9.84□□□□□ -0.83
PTPN12-202ENST00000407343 INTS3Q68E01 1043 aaKnown RBP9.84□□□□□ -0.83
PTPN12-202ENST00000407343 PRR23CQ6ZRP0 262 aa9.84□□□□□ -0.83
PTPN12-202ENST00000407343 CLEC10AQ8IUN9 316 aa9.84□□□□□ -0.83
PTPN12-202ENST00000407343 SHISA5Q8N114 240 aa9.84□□□□□ -0.83
PTPN12-202ENST00000407343 DNAJC2Q99543 621 aaKnown RBP9.84□□□□□ -0.83
PTPN12-202ENST00000407343 YIPF2Q9BWQ6 316 aa9.84□□□□□ -0.83
PTPN12-202ENST00000407343 C7orf69Q9H7B7 122 aa9.84□□□□□ -0.83
PTPN12-202ENST00000407343 A0A1W2PQH9 124 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 HMX2A2RU54 273 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 UBOX5O94941 541 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 SLITRK5O94991 958 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 GUCY2CP25092 1073 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 ADMP35318 185 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 YARSP54577 528 aaKnown RBP9.83□□□□□ -0.84
PTPN12-202ENST00000407343 ANKS3Q6ZW76 656 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 DNAJB8Q8NHS0 232 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 CYB5D2Q8WUJ1 264 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 HNRNPLLQ8WVV9 542 aaKnown RBP9.83□□□□□ -0.84
PTPN12-202ENST00000407343 CRBNQ96SW2 442 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 RAXQ9Y2V3 346 aa9.83□□□□□ -0.84
PTPN12-202ENST00000407343 LTBP3Q9NS15 1303 aa9.82□□□□□ -0.84
PTPN12-202ENST00000407343 RGS13O14921 159 aa9.82□□□□□ -0.84
PTPN12-202ENST00000407343 RXRBP28702 533 aa9.82□□□□□ -0.84
PTPN12-202ENST00000407343 SERINC3Q13530 473 aa9.82□□□□□ -0.84
PTPN12-202ENST00000407343 MLECQ14165 292 aa9.82□□□□□ -0.84
PTPN12-202ENST00000407343 TTC6Q86TZ1 520 aa9.82□□□□□ -0.84
PTPN12-202ENST00000407343 RIN3Q8TB24 985 aa9.82□□□□□ -0.84
PTPN12-202ENST00000407343 KCNF1Q9H3M0 494 aa9.82□□□□□ -0.84
PTPN12-202ENST00000407343 SSU72Q9NP77 194 aaKnown RBP9.82□□□□□ -0.84
PTPN12-202ENST00000407343 UNC5AQ6ZN44 842 aa9.81□□□□□ -0.84
PTPN12-202ENST00000407343 FAM214BQ7L5A3 538 aa9.81□□□□□ -0.84
PTPN12-202ENST00000407343 MFSD2AQ8NA29 543 aa9.81□□□□□ -0.84
PTPN12-202ENST00000407343 BAHD1Q8TBE0 780 aaPredicted RBP9.81□□□□□ -0.84
PTPN12-202ENST00000407343 KIF2CQ99661 725 aa9.81□□□□□ -0.84
PTPN12-202ENST00000407343 SPOCK3Q9BQ16 436 aa9.81□□□□□ -0.84
PTPN12-202ENST00000407343 LEFTY1O75610 366 aa9.8□□□□□ -0.84
PTPN12-202ENST00000407343 NFKBIBQ15653 356 aa9.8□□□□□ -0.84
PTPN12-202ENST00000407343 NKAPLQ5M9Q1 402 aa9.8□□□□□ -0.84
PTPN12-202ENST00000407343 PAOXQ6QHF9 649 aa9.8□□□□□ -0.84
PTPN12-202ENST00000407343 XAGE3Q8WTP9 111 aa9.8□□□□□ -0.84
PTPN12-202ENST00000407343 DUSP23Q9BVJ7 150 aa9.8□□□□□ -0.84
PTPN12-202ENST00000407343 HIRIP3Q9BW71 556 aaPredicted RBP9.8□□□□□ -0.84
PTPN12-202ENST00000407343 CNTNAP4Q9C0A0 1308 aa9.8□□□□□ -0.84
PTPN12-202ENST00000407343 EOMESO95936 686 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms