RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PTPN21Q16825 1174 aa29.32■■■□□ 2.28
COL13A1-203ENST00000398969 CRACR2BQ8N4Y2 399 aaPredicted RBP29.32■■■□□ 2.28
COL13A1-203ENST00000398969 LINC00116Q8NCU8 138 aa29.32■■■□□ 2.28
COL13A1-203ENST00000398969 MPHOSPH8Q99549 860 aa29.32■■■□□ 2.28
COL13A1-203ENST00000398969 THSD7AQ9UPZ6 1657 aa29.32■■■□□ 2.28
COL13A1-203ENST00000398969 BCORQ6W2J9 1755 aa29.32■■■□□ 2.28
COL13A1-203ENST00000398969 ERCC6LQ2NKX8 1250 aa29.31■■■□□ 2.28
COL13A1-203ENST00000398969 NT5DC1Q5TFE4 455 aa29.31■■■□□ 2.28
COL13A1-203ENST00000398969 TRIM65Q6PJ69 517 aa29.31■■■□□ 2.28
COL13A1-203ENST00000398969 UTP14AQ9BVJ6 771 aaKnown RBP29.31■■■□□ 2.28
COL13A1-203ENST00000398969 FCHSD1Q86WN1 690 aa29.31■■■□□ 2.28
COL13A1-203ENST00000398969 MTA3Q9BTC8 594 aa29.31■■■□□ 2.28
COL13A1-203ENST00000398969 SEC31BQ9NQW1 1179 aa29.31■■■□□ 2.28
COL13A1-203ENST00000398969 DNAI1Q9UI46 699 aa29.31■■■□□ 2.28
COL13A1-203ENST00000398969 POLR2DO15514 142 aaKnown RBP29.3■■■□□ 2.28
COL13A1-203ENST00000398969 MEX3CQ5U5Q3 659 aaKnown RBP29.3■■■□□ 2.28
COL13A1-203ENST00000398969 TMEM139Q8IV31 216 aa29.3■■■□□ 2.28
COL13A1-203ENST00000398969 REXO1L1PQ8IX06 675 aa29.3■■■□□ 2.28
COL13A1-203ENST00000398969 CMTR1Q8N1G2 835 aaKnown RBP29.3■■■□□ 2.28
COL13A1-203ENST00000398969 CCDC82Q8N4S0 544 aa29.3■■■□□ 2.28
COL13A1-203ENST00000398969 SERTAD1Q9UHV2 236 aa29.3■■■□□ 2.28
COL13A1-203ENST00000398969 PCDHB6Q9Y5E3 794 aa29.3■■■□□ 2.28
COL13A1-203ENST00000398969 ERICH2A1L162 156 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 NPHP1O15259 732 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 PRR29P0C7W0 189 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 HSPA1LP34931 641 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 NR5A1Q13285 461 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 PARP10Q53GL7 1025 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 FAM53CQ9NYF3 392 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 CCDC196A0A1B0GTZ2 297 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 SARSP49591 514 aaKnown RBP29.29■■■□□ 2.28
COL13A1-203ENST00000398969 BCAMP50895 628 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 TMTC2Q8N394 836 aa29.29■■■□□ 2.28
COL13A1-203ENST00000398969 ZNF579Q8NAF0 562 aaKnown RBP29.29■■■□□ 2.28
COL13A1-203ENST00000398969 RCAN1P53805 252 aa29.28■■■□□ 2.28
COL13A1-203ENST00000398969 GABPB1Q06547 395 aaPredicted RBP29.28■■■□□ 2.28
COL13A1-203ENST00000398969 FMR1Q06787 632 aaKnown RBP eCLIP29.28■■■□□ 2.28
COL13A1-203ENST00000398969 TBX2Q13207 712 aaPredicted RBP29.28■■■□□ 2.28
COL13A1-203ENST00000398969 KRT222Q8N1A0 295 aa29.28■■■□□ 2.28
COL13A1-203ENST00000398969 MLKLQ8NB16 471 aa29.28■■■□□ 2.28
COL13A1-203ENST00000398969 H2AFXP16104 143 aaPredicted RBP29.28■■■□□ 2.28
COL13A1-203ENST00000398969 KCNQ4P56696 695 aa29.28■■■□□ 2.28
COL13A1-203ENST00000398969 ZNF654Q8IZM8 581 aa29.28■■■□□ 2.28
COL13A1-203ENST00000398969 MIGA1Q8NAN2 632 aa29.28■■■□□ 2.28
COL13A1-203ENST00000398969 FANCBQ8NB91 859 aa29.28■■■□□ 2.28
COL13A1-203ENST00000398969 GJD4Q96KN9 370 aaPredicted RBP29.28■■■□□ 2.28
COL13A1-203ENST00000398969 ZNF18P17022 549 aa29.27■■■□□ 2.28
COL13A1-203ENST00000398969 MORC3Q14149 939 aa29.27■■■□□ 2.28
COL13A1-203ENST00000398969 HSP90AA4PQ58FG1 418 aa29.27■■■□□ 2.28
COL13A1-203ENST00000398969 SMARCE1Q969G3 411 aa29.27■■■□□ 2.28
COL13A1-203ENST00000398969 RNF41Q9H4P4 317 aaPredicted RBP29.27■■■□□ 2.28
COL13A1-203ENST00000398969 NIP7Q9Y221 180 aaKnown RBP eCLIP29.27■■■□□ 2.28
COL13A1-203ENST00000398969 NFE2L3Q9Y4A8 694 aa29.27■■■□□ 2.28
COL13A1-203ENST00000398969 SRPRBQ9Y5M8 271 aaKnown RBP29.27■■■□□ 2.28
COL13A1-203ENST00000398969 ARHGAP6O43182 974 aa29.27■■■□□ 2.28
COL13A1-203ENST00000398969 OXER1Q8TDS5 423 aa29.27■■■□□ 2.28
COL13A1-203ENST00000398969 DACH1Q9UI36 760 aa29.27■■■□□ 2.28
COL13A1-203ENST00000398969 FANCGO15287 622 aa29.26■■■□□ 2.27
COL13A1-203ENST00000398969 ENOX1Q8TC92 643 aaKnown RBP29.26■■■□□ 2.27
COL13A1-203ENST00000398969 NUP133Q8WUM0 1156 aa29.26■■■□□ 2.27
COL13A1-203ENST00000398969 ZNF446Q9NWS9 450 aa29.26■■■□□ 2.27
COL13A1-203ENST00000398969 ZSCAN12O43309 604 aa29.25■■■□□ 2.27
COL13A1-203ENST00000398969 KIF20AO95235 890 aa29.25■■■□□ 2.27
COL13A1-203ENST00000398969 FAM182BQ5T319 152 aa29.25■■■□□ 2.27
COL13A1-203ENST00000398969 CEP131Q9UPN4 1083 aa29.25■■■□□ 2.27
COL13A1-203ENST00000398969 ACTN4O43707 911 aaKnown RBP29.25■■■□□ 2.27
COL13A1-203ENST00000398969 IGSF3O75054 1194 aa29.25■■■□□ 2.27
COL13A1-203ENST00000398969 PPARAQ07869 468 aa29.25■■■□□ 2.27
COL13A1-203ENST00000398969 ZNF827Q17R98 1081 aa29.25■■■□□ 2.27
COL13A1-203ENST00000398969 GRAMD1CQ8IYS0 662 aa29.25■■■□□ 2.27
COL13A1-203ENST00000398969 TRIML1Q8N9V2 468 aa29.25■■■□□ 2.27
COL13A1-203ENST00000398969 LRP2BPQ9P2M1 347 aa29.24■■■□□ 2.27
COL13A1-203ENST00000398969 ZNF652Q9Y2D9 606 aa29.24■■■□□ 2.27
COL13A1-203ENST00000398969 CNTNAP4Q9C0A0 1308 aa29.24■■■□□ 2.27
COL13A1-203ENST00000398969 NOL10Q9BSC4 688 aaKnown RBP29.24■■■□□ 2.27
COL13A1-203ENST00000398969 UBAC1Q9BSL1 405 aa29.24■■■□□ 2.27
COL13A1-203ENST00000398969 PPP2R2CQ9Y2T4 447 aa29.24■■■□□ 2.27
COL13A1-203ENST00000398969 AFF2P51816 1311 aa29.24■■■□□ 2.27
COL13A1-203ENST00000398969 NTSR2O95665 410 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 KANK3Q6NY19 840 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 CLEC4GQ6UXB4 293 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 TRMT44Q8IYL2 757 aaKnown RBP29.23■■■□□ 2.27
COL13A1-203ENST00000398969 PDILTQ8N807 584 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 BAG1Q99933 345 aaPredicted RBP29.23■■■□□ 2.27
COL13A1-203ENST00000398969 CABP5Q9NP86 173 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 BTAF1O14981 1849 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 VWA3AA6NCI4 1184 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 ATP2B1P20020 1258 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 CDK11BP21127 795 aaKnown RBP29.23■■■□□ 2.27
COL13A1-203ENST00000398969 USP49Q70CQ1 688 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 MED15Q96RN5 788 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 CSRNP2Q9H175 543 aa29.23■■■□□ 2.27
COL13A1-203ENST00000398969 SPECC1LQ69YQ0 1117 aa29.22■■■□□ 2.27
COL13A1-203ENST00000398969 IGHMBP2P38935 993 aaKnown RBP29.22■■■□□ 2.27
COL13A1-203ENST00000398969 SEC23AQ15436 765 aa29.22■■■□□ 2.27
COL13A1-203ENST00000398969 CCDC152Q4G0S7 254 aa29.22■■■□□ 2.27
COL13A1-203ENST00000398969 ADGRA1Q86SQ6 560 aa29.22■■■□□ 2.27
COL13A1-203ENST00000398969 TC2NQ8N9U0 490 aa29.22■■■□□ 2.27
COL13A1-203ENST00000398969 SPATA20Q8TB22 786 aa29.22■■■□□ 2.27
COL13A1-203ENST00000398969 RNF26Q9BY78 433 aaPredicted RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms