RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 MCM9Q9NXL9 1143 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 PSDA5PKW4 1024 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-202ENST00000398417 AKR1B15C9JRZ8 316 aaPredicted RBP5.6□□□□□ -1.51
SMAD4-202ENST00000398417 IKBKBO14920 756 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 KIF5CO60282 957 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 PPP2R3AQ06190 1150 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 KANK3Q6NY19 840 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 VSTM4Q8IW00 320 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 ZHX3Q9H4I2 956 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 LY9Q9HBG7 655 aa5.6□□□□□ -1.51
SMAD4-202ENST00000398417 TEX33O43247 280 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 PARP10Q53GL7 1025 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 METTL16Q86W50 562 aaKnown RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 CCDC102AQ96A19 550 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 TIGD1Q96MW7 591 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 ZSCAN10Q96SZ4 725 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 MYO10Q9HD67 2058 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 CDHR2Q9BYE9 1310 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 F8W031 263 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 RBM6P78332 1123 aaKnown RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 FMR1Q06787 632 aaKnown RBP eCLIP5.59□□□□□ -1.517e-8■■■□□ 16.8
SMAD4-202ENST00000398417 FAM182BQ5T319 152 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 SYMPKQ92797 1274 aaKnown RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 DYNLL2Q96FJ2 89 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 MROH7-TTC4A0A0A0MT08 1334 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 E4F1Q66K89 784 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 PAGE5Q96GU1 130 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 CDK5RAP3Q96JB5 506 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 TRIM47Q96LD4 638 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 SLF1Q9BQI6 1058 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 ZNF219Q9P2Y4 722 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 FBXO2Q9UK22 296 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 REREQ9P2R6 1566 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 ETF1P62495 437 aaKnown RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 TFAP4Q01664 338 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 ENOX2Q16206 610 aaKnown RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 LRRN4CLQ8ND94 238 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 ZNF652Q9Y2D9 606 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 CALM1P0DP23 149 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 CALM2P0DP24 149 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 CALM3P0DP25 149 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 PLCD1P51178 756 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 USP49Q70CQ1 688 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 NBPF5PQ86XG9 351 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 ZFP91Q96JP5 570 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 ST7Q9NRC1 585 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 TACC3Q9Y6A5 838 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 NMT2O60551 498 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 ARID4AP29374 1257 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 MTIF2P46199 727 aaKnown RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 FBXO38Q6PIJ6 1188 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 TOGARAM2Q6ZUX3 1019 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 ANKRD7Q92527 254 aa5.59□□□□□ -1.51
SMAD4-202ENST00000398417 SRP68Q9UHB9 627 aaKnown RBP5.59□□□□□ -1.51
SMAD4-202ENST00000398417 UBN2Q6ZU65 1347 aa5.59□□□□□ -1.52
SMAD4-202ENST00000398417 ZC3H13Q5T200 1668 aaKnown RBP5.59□□□□□ -1.52
SMAD4-202ENST00000398417 IFNAR1P17181 557 aa5.59□□□□□ -1.52
SMAD4-202ENST00000398417 DNA2P51530 1060 aa5.59□□□□□ -1.52
SMAD4-202ENST00000398417 GPS2Q13227 327 aa5.59□□□□□ -1.52
SMAD4-202ENST00000398417 PICALMQ13492 652 aa5.59□□□□□ -1.52
SMAD4-202ENST00000398417 KMT5BQ4FZB7 885 aa5.59□□□□□ -1.52
SMAD4-202ENST00000398417 RESP18Q5W5W9 173 aa5.59□□□□□ -1.52
SMAD4-202ENST00000398417 MAPKAPK5Q8IW41 473 aa5.59□□□□□ -1.52
SMAD4-202ENST00000398417 TUBE1Q9UJT0 475 aa5.59□□□□□ -1.52
SMAD4-202ENST00000398417 RIMBP2O15034 1052 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 IDEP14735 1019 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 PTPREP23469 700 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 NKX1-1Q15270 411 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-202ENST00000398417 IGDCC4Q8TDY8 1250 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 ERCC3P19447 782 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 PPM1FP49593 454 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-202ENST00000398417 CAPZA3Q96KX2 299 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 AGXT2Q9BYV1 514 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 ANKIB1Q9P2G1 1089 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 BIN2Q9UBW5 565 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-202ENST00000398417 CTAGE15A4D2H0 777 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 IPO7O95373 1038 aaKnown RBP5.58□□□□□ -1.52
SMAD4-202ENST00000398417 CTAGE8P0CG41 777 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 PTPAQ15257 358 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 PPP4R3CPQ6ZMV5 832 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 KIAA1328Q86T90 577 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 CTAGE6Q86UF2 777 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 CTAGE4Q8IX94 777 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 TCHPQ9BT92 498 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 OSBPL5Q9H0X9 879 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-202ENST00000398417 GUCA1BQ9UMX6 200 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 CASP14P31944 242 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 GRM1Q13255 1194 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 ACRBPQ8NEB7 543 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 NLRP3Q96P20 1036 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 SOWAHDA6NJG2 315 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 TSPY3P0CV98 308 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 TSPY8P0CW00 308 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 EIF6P56537 245 aaKnown RBP5.58□□□□□ -1.52
SMAD4-202ENST00000398417 UBXN1Q04323 297 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 CABP7Q86V35 215 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 PCNTO95613 3336 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 ZPR1O75312 459 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 STAT6P42226 847 aa5.58□□□□□ -1.52
SMAD4-202ENST00000398417 LETM2Q2VYF4 491 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms