RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 DCAF8L1A6NGE4 600 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 DTNBO60941 627 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 NFXL1Q6ZNB6 911 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 IQCA1Q86XH1 822 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 AGXT2Q9BYV1 514 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 DNAJC18Q9H819 358 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 ATRNL1Q5VV63 1379 aa24.92■■□□□ 1.58
CPNE1-204ENST00000397443 TNKSO95271 1327 aa24.91■■□□□ 1.58
CPNE1-204ENST00000397443 ZC3H4Q9UPT8 1303 aaKnown RBP24.91■■□□□ 1.58
CPNE1-204ENST00000397443 TNFAIP1Q13829 316 aa24.91■■□□□ 1.58
CPNE1-204ENST00000397443 FAM83AQ86UY5 434 aa24.91■■□□□ 1.58
CPNE1-204ENST00000397443 ZSCAN10Q96SZ4 725 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-204ENST00000397443 SLKQ9H2G2 1235 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-204ENST00000397443 LY9Q9HBG7 655 aa24.91■■□□□ 1.58
CPNE1-204ENST00000397443 MYH8P13535 1937 aa24.9■■□□□ 1.58
CPNE1-204ENST00000397443 SHMT1P34896 483 aa24.9■■□□□ 1.58
CPNE1-204ENST00000397443 WTAPQ15007 396 aa24.9■■□□□ 1.58
CPNE1-204ENST00000397443 CCDC83Q8IWF9 413 aa24.9■■□□□ 1.58
CPNE1-204ENST00000397443 EHD4Q9H223 541 aa24.9■■□□□ 1.58
CPNE1-204ENST00000397443 SWAP70Q9UH65 585 aa24.9■■□□□ 1.58
CPNE1-204ENST00000397443 BRPF3Q9ULD4 1205 aa24.9■■□□□ 1.58
CPNE1-204ENST00000397443 KLF18A0A0U1RQI7 1052 aa24.9■■□□□ 1.58
CPNE1-204ENST00000397443 L3MBTL3Q96JM7 780 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-204ENST00000397443 MIGA2Q7L4E1 593 aa24.89■■□□□ 1.58
CPNE1-204ENST00000397443 ENAHQ8N8S7 591 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-204ENST00000397443 ZSCAN31Q96LW9 406 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-204ENST00000397443 DEFB129Q9H1M3 183 aa24.89■■□□□ 1.58
CPNE1-204ENST00000397443 MPHOSPH10O00566 681 aaKnown RBP24.88■■□□□ 1.57
CPNE1-204ENST00000397443 PRAMEF18Q5VWM3 479 aa24.88■■□□□ 1.57
CPNE1-204ENST00000397443 FOXP4Q8IVH2 680 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-204ENST00000397443 AKR1B1P15121 316 aa24.88■■□□□ 1.57
CPNE1-204ENST00000397443 RXRAP19793 462 aa24.88■■□□□ 1.57
CPNE1-204ENST00000397443 EPHX2P34913 555 aa24.88■■□□□ 1.57
CPNE1-204ENST00000397443 CCT2P78371 535 aaKnown RBP24.88■■□□□ 1.57
CPNE1-204ENST00000397443 MYL10Q9BUA6 226 aa24.88■■□□□ 1.57
CPNE1-204ENST00000397443 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.88■■□□□ 1.579e-8■■■■■ 116.8
CPNE1-204ENST00000397443 COL2A1P02458 1487 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-204ENST00000397443 CCDC69A6NI79 296 aa24.87■■□□□ 1.57
CPNE1-204ENST00000397443 GOLGA8BA8MQT2 603 aa24.87■■□□□ 1.57
CPNE1-204ENST00000397443 FBXL16Q8N461 479 aa24.87■■□□□ 1.57
CPNE1-204ENST00000397443 SH2B1Q9NRF2 756 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-204ENST00000397443 IL17RBQ9NRM6 502 aa24.87■■□□□ 1.57
CPNE1-204ENST00000397443 POLR2AP24928 1970 aaKnown RBP24.87■■□□□ 1.57
CPNE1-204ENST00000397443 SHROOM1Q2M3G4 852 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-204ENST00000397443 EAPPQ56P03 285 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-204ENST00000397443 IFIT1BQ5T764 474 aaKnown RBP24.86■■□□□ 1.57
CPNE1-204ENST00000397443 APOBEC3FQ8IUX4 373 aaKnown RBP24.86■■□□□ 1.57
CPNE1-204ENST00000397443 PDIA3P30101 505 aaKnown RBP24.86■■□□□ 1.57
CPNE1-204ENST00000397443 SEC23AQ15436 765 aa24.86■■□□□ 1.57
CPNE1-204ENST00000397443 CCDC144CPQ8IYA2 1237 aa24.86■■□□□ 1.57
CPNE1-204ENST00000397443 NCOA5Q9HCD5 579 aaKnown RBP24.86■■□□□ 1.57
CPNE1-204ENST00000397443 GDF11O95390 407 aa24.85■■□□□ 1.57
CPNE1-204ENST00000397443 LIFRP42702 1097 aa24.85■■□□□ 1.57
CPNE1-204ENST00000397443 ST3GAL1Q11201 340 aa24.85■■□□□ 1.57
CPNE1-204ENST00000397443 CERKLQ49MI3 558 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-204ENST00000397443 MICU3Q86XE3 530 aa24.85■■□□□ 1.57
CPNE1-204ENST00000397443 PGAP2Q9UHJ9 254 aa24.85■■□□□ 1.57
CPNE1-204ENST00000397443 STX8Q9UNK0 236 aa24.85■■□□□ 1.57
CPNE1-204ENST00000397443 CLEC10AQ8IUN9 316 aa24.84■■□□□ 1.57
CPNE1-204ENST00000397443 NEDD1Q8NHV4 660 aa24.84■■□□□ 1.57
CPNE1-204ENST00000397443 TEPSINQ96N21 525 aa24.84■■□□□ 1.57
CPNE1-204ENST00000397443 SLC12A7Q9Y666 1083 aa24.84■■□□□ 1.57
CPNE1-204ENST00000397443 CUL4AQ13619 759 aa24.84■■□□□ 1.57
CPNE1-204ENST00000397443 APOA5Q6Q788 366 aa24.84■■□□□ 1.57
CPNE1-204ENST00000397443 CHMP4CQ96CF2 233 aa24.84■■□□□ 1.57
CPNE1-204ENST00000397443 HERC5Q9UII4 1024 aaKnown RBP24.84■■□□□ 1.57
CPNE1-204ENST00000397443 SCRN1Q12765 414 aa24.83■■□□□ 1.57
CPNE1-204ENST00000397443 NBPF12Q5TAG4 269 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-204ENST00000397443 DLK2Q6UY11 383 aa24.83■■□□□ 1.57
CPNE1-204ENST00000397443 SGMS1Q86VZ5 419 aa24.83■■□□□ 1.57
CPNE1-204ENST00000397443 ZNF274Q96GC6 653 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-204ENST00000397443 CEP95Q96GE4 821 aa24.83■■□□□ 1.57
CPNE1-204ENST00000397443 MTA3Q9BTC8 594 aa24.83■■□□□ 1.57
CPNE1-204ENST00000397443 IQCA1LA6NCM1 817 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 POTECB2RU33 542 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 PPFIA3O75145 1194 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 METTL16Q86W50 562 aaKnown RBP24.82■■□□□ 1.56
CPNE1-204ENST00000397443 NUP133Q8WUM0 1156 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 GTF3C6Q969F1 213 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 DCPSQ96C86 337 aaKnown RBP24.82■■□□□ 1.56
CPNE1-204ENST00000397443 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.82■■□□□ 1.56
CPNE1-204ENST00000397443 TAF1DQ9H5J8 278 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-204ENST00000397443 MTMR7Q9Y216 660 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 PFKFB2O60825 505 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 EVCP57679 992 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 RRP1BQ14684 758 aaKnown RBP24.82■■□□□ 1.56
CPNE1-204ENST00000397443 RCSD1Q6JBY9 416 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 TATDN1Q6P1N9 297 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 SYNE3Q6ZMZ3 975 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 USP50Q70EL3 339 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-204ENST00000397443 TMTC2Q8N394 836 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 HPS5Q9UPZ3 1129 aa24.82■■□□□ 1.56
CPNE1-204ENST00000397443 ZBTB43O43298 467 aa24.81■■□□□ 1.56
CPNE1-204ENST00000397443 ZNF526Q8TF50 670 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-204ENST00000397443 METAP2P50579 478 aaKnown RBP eCLIP24.8■■□□□ 1.56
CPNE1-204ENST00000397443 ATP2B2Q01814 1243 aa24.8■■□□□ 1.56
CPNE1-204ENST00000397443 ZNF654Q8IZM8 581 aa24.8■■□□□ 1.56
CPNE1-204ENST00000397443 TCP11L1Q9NUJ3 509 aa24.8■■□□□ 1.56
CPNE1-204ENST00000397443 ADM5C9JUS6 153 aa24.8■■□□□ 1.56
CPNE1-204ENST00000397443 NT5C2P49902 561 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms