RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ANKRD13DQ6ZTN6 518 aa10□□□□□ -0.81
RTN4-206ENST00000394611 NAPBQ9H115 298 aa10□□□□□ -0.81
RTN4-206ENST00000394611 TOGARAM1Q9Y4F4 1720 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 EFCAB8A8MWE9 144 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 ARHGAP6O43182 974 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 SASH3O75995 380 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 IVLP07476 585 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 RPSAP08865 295 aaKnown RBP9.99□□□□□ -0.81
RTN4-206ENST00000394611 ACTN2P35609 894 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 CABP4P57796 275 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 SLC7A5Q01650 507 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 SLC9C2Q5TAH2 1124 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 SCN11AQ9UI33 1791 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 CEMIPQ8WUJ3 1361 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 SRCAPQ6ZRS2 3230 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 BTBD18B2RXH4 712 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 CASP14P31944 242 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 KRT9P35527 623 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 PEX19P40855 299 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 GUCY2FP51841 1108 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 TNNI3KQ59H18 835 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 BEND3Q5T5X7 828 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 FBXW10Q5XX13 1052 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 OTUD6BQ8N6M0 293 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 JPH2Q9BR39 696 aaPredicted RBP9.99□□□□□ -0.81
RTN4-206ENST00000394611 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.99□□□□□ -0.81
RTN4-206ENST00000394611 FPGT-TNNI3KV9GXZ4 949 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 PLEKHG2Q9H7P9 1386 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 EIF3CLB5ME19 914 aaKnown RBP9.99□□□□□ -0.81
RTN4-206ENST00000394611 ZBTB43O43298 467 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 ERLIN2O94905 339 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 KRT40Q6A162 431 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 EIF3CQ99613 913 aaKnown RBP9.99□□□□□ -0.81
RTN4-206ENST00000394611 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.99□□□□□ -0.81
RTN4-206ENST00000394611 SLC52A2Q9HAB3 445 aa9.99□□□□□ -0.81
RTN4-206ENST00000394611 GOLGA6L7A0A1B0GV03 622 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 GOLGA6CA6NDK9 693 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 RNF40O75150 1001 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 GOLGA6DP0CG33 693 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 CCDC178Q5BJE1 867 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 EPHA10Q5JZY3 1008 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 KIRREL3Q8IZU9 778 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 NCOA7Q8NI08 942 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 GOLGA6AQ9NYA3 693 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 A1BGP04217 495 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 IDEP14735 1019 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 PDIA3P30101 505 aaKnown RBP9.98□□□□□ -0.81
RTN4-206ENST00000394611 GPR161Q8N6U8 529 aaKnown RBP9.98□□□□□ -0.81
RTN4-206ENST00000394611 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 DOT1LQ8TEK3 1739 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 H3BQF6 201 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 TEX33O43247 280 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 CTDSPL2Q05D32 466 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 SSRP1Q08945 709 aaKnown RBP9.98□□□□□ -0.81
RTN4-206ENST00000394611 SPTY2D1Q68D10 685 aaPredicted RBP9.98□□□□□ -0.81
RTN4-206ENST00000394611 SPECC1LQ69YQ0 1117 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 PIGBQ92521 554 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 TRIM47Q96LD4 638 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 SLC24A3Q9HC58 644 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 SEPT11Q9NVA2 429 aaKnown RBP9.98□□□□□ -0.81
RTN4-206ENST00000394611 TRIM10Q9UDY6 481 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 DACH1Q9UI36 760 aa9.98□□□□□ -0.81
RTN4-206ENST00000394611 MTIF2P46199 727 aaKnown RBP9.97□□□□□ -0.81
RTN4-206ENST00000394611 PRPF4BQ13523 1007 aaKnown RBP9.97□□□□□ -0.81
RTN4-206ENST00000394611 NAA25Q14CX7 972 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 ADALQ6DHV7 355 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 FAM76AQ8TAV0 307 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 TRIM31Q9BZY9 425 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 GBP3Q9H0R5 595 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 PPANQ9NQ55 473 aaKnown RBP9.97□□□□□ -0.81
RTN4-206ENST00000394611 TMOD3Q9NYL9 352 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 DENND2AQ9ULE3 1009 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 YEATS4O95619 227 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 MCM7P33993 719 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 GNGT1P63211 74 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 NR5A1Q13285 461 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 STOX1Q6ZVD7 989 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 BAZ2BQ9UIF8 2168 aaKnown RBP9.97□□□□□ -0.81
RTN4-206ENST00000394611 TLDC2A0PJX2 215 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 GOLGA6L10A6NI86 522 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 ERVV-2B6SEH9 535 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 HMGB1P09429 215 aaKnown RBP9.97□□□□□ -0.81
RTN4-206ENST00000394611 ITGB4P16144 1822 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 INPP5BP32019 993 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 CYP27A1Q02318 531 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 LRRC24Q50LG9 513 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 GBP6Q6ZN66 633 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 LINS1Q8NG48 757 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 GOLGA5Q8TBA6 731 aa9.97□□□□□ -0.81
RTN4-206ENST00000394611 SNAP23O00161 211 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 AKR1B10O60218 316 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 RBL2Q08999 1139 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 DIS3L2Q8IYB7 885 aaKnown RBP9.96□□□□□ -0.81
RTN4-206ENST00000394611 BANK1Q8NDB2 785 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 NAPGQ99747 312 aaPredicted RBP9.96□□□□□ -0.81
RTN4-206ENST00000394611 TACO1Q9BSH4 297 aaKnown RBP9.96□□□□□ -0.81
RTN4-206ENST00000394611 PUS3Q9BZE2 481 aaKnown RBP9.96□□□□□ -0.81
RTN4-206ENST00000394611 LRP2BPQ9P2M1 347 aa9.96□□□□□ -0.81
RTN4-206ENST00000394611 ADAMTS7Q9UKP4 1686 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms