RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CCDC96Q2M329 555 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 KMT5BQ4FZB7 885 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 MICALCLQ6ZW33 695 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.45□□□□□ -1.38
RFFL-202ENST00000394597 CNKSR1Q969H4 720 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 MKRN1Q9UHC7 482 aaKnown RBP6.45□□□□□ -1.38
RFFL-202ENST00000394597 RGS12O14924 1447 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 NECTIN1Q15223 517 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 MAP9Q49MG5 647 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 AKNAD1Q5T1N1 836 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 PI16Q6UXB8 463 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 CCDC12Q8WUD4 166 aaPredicted RBP6.45□□□□□ -1.38
RFFL-202ENST00000394597 JDP2Q8WYK2 163 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 OSBP2Q969R2 916 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 ZKSCAN3Q9BRR0 538 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 ST7Q9NRC1 585 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 MINPP1Q9UNW1 487 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 TNS2Q63HR2 1409 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 GOLGA6L7A0A1B0GV03 622 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 CYP2C19P33261 490 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 ACTN2P35609 894 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 MCAMP43121 646 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 GTF2IP78347 998 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 STX1AQ16623 288 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 ADCK5Q3MIX3 580 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 OTUD6BQ8N6M0 293 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 GOLGA1Q92805 767 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 MED1Q15648 1581 aaPredicted RBP6.45□□□□□ -1.38
RFFL-202ENST00000394597 LTN1O94822 1766 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 M0R2C6 588 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 PPEF1O14829 653 aaPredicted RBP6.45□□□□□ -1.38
RFFL-202ENST00000394597 BRD1O95696 1058 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 CYP21A2P08686 494 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 LIG1P18858 919 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 SF3B3Q15393 1217 aaKnown RBP6.45□□□□□ -1.38
RFFL-202ENST00000394597 ME3Q16798 604 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 MFSD14BQ5SR56 506 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 DYDC1Q8WWB3 177 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 CDK5RAP3Q96JB5 506 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 VAT1LQ9HCJ6 419 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 ZBTB12Q9Y330 459 aaPredicted RBP6.45□□□□□ -1.38
RFFL-202ENST00000394597 CARMIL3Q8ND23 1372 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 PNMA6AP0CW24 399 aaPredicted RBP6.44□□□□□ -1.38
RFFL-202ENST00000394597 TOP1P11387 765 aaKnown RBP6.44□□□□□ -1.38
RFFL-202ENST00000394597 PPARAQ07869 468 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 NFIXQ14938 502 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 MCTP2Q6DN12 878 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 SMIM5Q71RC9 77 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 CELF1Q92879 486 aaKnown RBP6.44□□□□□ -1.38
RFFL-202ENST00000394597 ZNF274Q96GC6 653 aaPredicted RBP6.44□□□□□ -1.38
RFFL-202ENST00000394597 PIH1D3Q9NQM4 214 aaKnown RBP6.44□□□□□ -1.38
RFFL-202ENST00000394597 WWC3Q9ULE0 1092 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 MYO6Q9UM54 1294 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.44□□□□□ -1.38
RFFL-202ENST00000394597 CCDC194A0A1B0GVG4 234 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 KIF5CO60282 957 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 RXRAP19793 462 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 INPP5BP32019 993 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 MAGEA9P43362 315 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 GYS2P54840 703 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 RASGRF1Q13972 1273 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 HDXQ7Z353 690 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 FMNL3Q8IVF7 1028 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 PUS7LQ9H0K6 701 aaKnown RBP6.44□□□□□ -1.38
RFFL-202ENST00000394597 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 SAP30BPQ9UHR5 308 aaKnown RBP6.44□□□□□ -1.38
RFFL-202ENST00000394597 USP17L12C9JPN9 530 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 USP17L21D6R901 530 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 ANKRD65E5RJM6 399 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 CTAGE5O15320 804 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 NTSR2O95665 410 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 NPR1P16066 1061 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 LIG3P49916 1009 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 KIAA1328Q86T90 577 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 PAIP2Q9BPZ3 127 aaKnown RBP6.44□□□□□ -1.38
RFFL-202ENST00000394597 NRBP1Q9UHY1 535 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 TPCN1Q9ULQ1 816 aa6.44□□□□□ -1.38
RFFL-202ENST00000394597 GOLGA6L9A6NEM1 432 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 SNAP23O00161 211 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 PRDM1O75626 825 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 CYP2E1P05181 493 aaPredicted RBP6.43□□□□□ -1.38
RFFL-202ENST00000394597 MMP10P09238 476 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 CLCN6P51797 869 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 CLNS1AP54105 237 aaKnown RBP6.43□□□□□ -1.38
RFFL-202ENST00000394597 PPP2R3AQ06190 1150 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 PPP2R5BQ15173 497 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 PPFIBP1Q86W92 1011 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 FSIP1Q8NA03 581 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 FBXO18Q8NFZ0 1043 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 TGFBRAP1Q8WUH2 860 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 CXorf56Q9H5V9 222 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 NCOA5Q9HCD5 579 aaKnown RBP6.43□□□□□ -1.38
RFFL-202ENST00000394597 ARPP21Q9UBL0 812 aaPredicted RBP6.43□□□□□ -1.38
RFFL-202ENST00000394597 RFX7Q2KHR2 1363 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 DCAF8L1A6NGE4 600 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 GUCY2CP25092 1073 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 AP1ARQ63HQ0 302 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 CCAR1Q8IX12 1150 aaKnown RBP6.43□□□□□ -1.38
RFFL-202ENST00000394597 LARGE2Q8N3Y3 721 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 SDR42E1Q8WUS8 393 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms