RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 IGDCC4Q8TDY8 1250 aa28.58■■■□□ 2.17
LRFN4-202ENST00000393952 TEPSINQ96N21 525 aa28.58■■■□□ 2.17
LRFN4-202ENST00000393952 TRIM34Q9BYJ4 488 aa28.58■■■□□ 2.17
LRFN4-202ENST00000393952 IQCA1LA6NCM1 817 aa28.58■■■□□ 2.17
LRFN4-202ENST00000393952 NT5C2P49902 561 aa28.58■■■□□ 2.17
LRFN4-202ENST00000393952 TMEM67Q5HYA8 995 aa28.58■■■□□ 2.17
LRFN4-202ENST00000393952 USP50Q70EL3 339 aaPredicted RBP28.58■■■□□ 2.17
LRFN4-202ENST00000393952 TMX3Q96JJ7 454 aa28.58■■■□□ 2.17
LRFN4-202ENST00000393952 UBAC1Q9BSL1 405 aa28.58■■■□□ 2.17
LRFN4-202ENST00000393952 TAF1DQ9H5J8 278 aaPredicted RBP28.58■■■□□ 2.17
LRFN4-202ENST00000393952 TPCN1Q9ULQ1 816 aa28.58■■■□□ 2.17
LRFN4-202ENST00000393952 APOBRQ0VD83 1088 aa28.57■■■□□ 2.16
LRFN4-202ENST00000393952 SENP2Q9HC62 589 aa28.57■■■□□ 2.16
LRFN4-202ENST00000393952 TAOK2Q9UL54 1235 aa28.57■■■□□ 2.16
LRFN4-202ENST00000393952 ANGEL1Q9UNK9 670 aaKnown RBP28.57■■■□□ 2.16
LRFN4-202ENST00000393952 PITPNM2Q9BZ72 1349 aa28.57■■■□□ 2.16
LRFN4-202ENST00000393952 LARGE1O95461 756 aa28.56■■■□□ 2.16
LRFN4-202ENST00000393952 TSPY3P0CV98 308 aa28.56■■■□□ 2.16
LRFN4-202ENST00000393952 TSPY8P0CW00 308 aa28.56■■■□□ 2.16
LRFN4-202ENST00000393952 SART3Q15020 963 aaKnown RBP28.56■■■□□ 2.16
LRFN4-202ENST00000393952 IQCA1Q86XH1 822 aa28.56■■■□□ 2.16
LRFN4-202ENST00000393952 ZSCAN10Q96SZ4 725 aaPredicted RBP28.56■■■□□ 2.16
LRFN4-202ENST00000393952 MTA3Q9BTC8 594 aa28.56■■■□□ 2.16
LRFN4-202ENST00000393952 TNKSO95271 1327 aa28.56■■■□□ 2.16
LRFN4-202ENST00000393952 NMT2O60551 498 aa28.55■■■□□ 2.16
LRFN4-202ENST00000393952 LY9Q9HBG7 655 aa28.55■■■□□ 2.16
LRFN4-202ENST00000393952 DAXXQ9UER7 740 aaPredicted RBP28.55■■■□□ 2.16
LRFN4-202ENST00000393952 HERC5Q9UII4 1024 aaKnown RBP28.55■■■□□ 2.16
LRFN4-202ENST00000393952 AKR1B1P15121 316 aa28.54■■■□□ 2.16
LRFN4-202ENST00000393952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.54■■■□□ 2.16
LRFN4-202ENST00000393952 ERICH2A1L162 156 aa28.54■■■□□ 2.16
LRFN4-202ENST00000393952 WTAPQ15007 396 aa28.54■■■□□ 2.16
LRFN4-202ENST00000393952 SEC23AQ15436 765 aa28.54■■■□□ 2.16
LRFN4-202ENST00000393952 TATDN1Q6P1N9 297 aa28.54■■■□□ 2.16
LRFN4-202ENST00000393952 ENAHQ8N8S7 591 aaPredicted RBP28.54■■■□□ 2.16
LRFN4-202ENST00000393952 NEDD1Q8NHV4 660 aa28.54■■■□□ 2.16
LRFN4-202ENST00000393952 ZSCAN31Q96LW9 406 aaPredicted RBP28.54■■■□□ 2.16
LRFN4-202ENST00000393952 ME3Q16798 604 aa28.53■■■□□ 2.16
LRFN4-202ENST00000393952 MIGA2Q7L4E1 593 aa28.53■■■□□ 2.16
LRFN4-202ENST00000393952 IL17RBQ9NRM6 502 aa28.53■■■□□ 2.16
LRFN4-202ENST00000393952 BRPF3Q9ULD4 1205 aa28.53■■■□□ 2.16
LRFN4-202ENST00000393952 LIFRP42702 1097 aa28.52■■■□□ 2.16
LRFN4-202ENST00000393952 EAPPQ56P03 285 aaPredicted RBP28.52■■■□□ 2.16
LRFN4-202ENST00000393952 PRAMEF18Q5VWM3 479 aa28.52■■■□□ 2.16
LRFN4-202ENST00000393952 DCPSQ96C86 337 aaKnown RBP28.52■■■□□ 2.16
LRFN4-202ENST00000393952 KLF18A0A0U1RQI7 1052 aa28.51■■■□□ 2.15
LRFN4-202ENST00000393952 TBC1D12O60347 775 aa28.51■■■□□ 2.15
LRFN4-202ENST00000393952 EVCP57679 992 aa28.51■■■□□ 2.15
LRFN4-202ENST00000393952 CERKLQ49MI3 558 aaPredicted RBP28.51■■■□□ 2.15
LRFN4-202ENST00000393952 NBPF12Q5TAG4 269 aaPredicted RBP28.51■■■□□ 2.15
LRFN4-202ENST00000393952 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.51■■■□□ 2.15
LRFN4-202ENST00000393952 PPP2R3BQ9Y5P8 575 aa28.51■■■□□ 2.15
LRFN4-202ENST00000393952 PLIN4Q96Q06 1357 aa28.51■■■□□ 2.15
LRFN4-202ENST00000393952 GREB1LQ9C091 1923 aaPredicted RBP28.51■■■□□ 2.15
LRFN4-202ENST00000393952 NFXL1Q6ZNB6 911 aa28.5■■■□□ 2.15
LRFN4-202ENST00000393952 SGMS1Q86VZ5 419 aa28.5■■■□□ 2.15
LRFN4-202ENST00000393952 ZC3H15Q8WU90 426 aaKnown RBP28.5■■■□□ 2.15
LRFN4-202ENST00000393952 CCDC17Q96LX7 622 aa28.5■■■□□ 2.15
LRFN4-202ENST00000393952 SH2B1Q9NRF2 756 aaPredicted RBP28.5■■■□□ 2.15
LRFN4-202ENST00000393952 TCP11L1Q9NUJ3 509 aa28.5■■■□□ 2.15
LRFN4-202ENST00000393952 NAP1L2Q9ULW6 460 aaPredicted RBP28.5■■■□□ 2.15
LRFN4-202ENST00000393952 STK3Q13188 491 aa28.5■■■□□ 2.15
LRFN4-202ENST00000393952 RRP1BQ14684 758 aaKnown RBP28.5■■■□□ 2.15
LRFN4-202ENST00000393952 SHROOM1Q2M3G4 852 aaPredicted RBP28.5■■■□□ 2.15
LRFN4-202ENST00000393952 PNMA8AQ86V59 439 aaPredicted RBP28.5■■■□□ 2.15
LRFN4-202ENST00000393952 NECAB1Q8N987 351 aa28.5■■■□□ 2.15
LRFN4-202ENST00000393952 SPRYD3Q8NCJ5 442 aa28.5■■■□□ 2.15
LRFN4-202ENST00000393952 RRAGCQ9HB90 399 aa28.5■■■□□ 2.15
LRFN4-202ENST00000393952 MPHOSPH10O00566 681 aaKnown RBP28.49■■■□□ 2.15
LRFN4-202ENST00000393952 GDF11O95390 407 aa28.49■■■□□ 2.15
LRFN4-202ENST00000393952 MAP3K10Q02779 954 aa28.49■■■□□ 2.15
LRFN4-202ENST00000393952 RCSD1Q6JBY9 416 aa28.49■■■□□ 2.15
LRFN4-202ENST00000393952 ADM5C9JUS6 153 aa28.48■■■□□ 2.15
LRFN4-202ENST00000393952 PDIA3P30101 505 aaKnown RBP28.48■■■□□ 2.15
LRFN4-202ENST00000393952 IFIT1BQ5T764 474 aaKnown RBP28.48■■■□□ 2.15
LRFN4-202ENST00000393952 RAB11FIP4Q86YS3 637 aa28.48■■■□□ 2.15
LRFN4-202ENST00000393952 SULF1Q8IWU6 871 aa28.48■■■□□ 2.15
LRFN4-202ENST00000393952 TMTC2Q8N394 836 aa28.48■■■□□ 2.15
LRFN4-202ENST00000393952 ZNF274Q96GC6 653 aaPredicted RBP28.48■■■□□ 2.15
LRFN4-202ENST00000393952 IGKV6D-41A0A0C4DH26 115 aa28.47■■■□□ 2.15
LRFN4-202ENST00000393952 CCDC69A6NI79 296 aa28.47■■■□□ 2.15
LRFN4-202ENST00000393952 ST3GAL1Q11201 340 aa28.47■■■□□ 2.15
LRFN4-202ENST00000393952 CUL4AQ13619 759 aa28.47■■■□□ 2.15
LRFN4-202ENST00000393952 CCDC178Q5BJE1 867 aa28.47■■■□□ 2.15
LRFN4-202ENST00000393952 FOXD4L1Q9NU39 408 aa28.47■■■□□ 2.15
LRFN4-202ENST00000393952 GOLGA8BA8MQT2 603 aa28.46■■■□□ 2.15
LRFN4-202ENST00000393952 VEGFAP15692 232 aaPredicted RBP28.46■■■□□ 2.15
LRFN4-202ENST00000393952 APOA5Q6Q788 366 aa28.46■■■□□ 2.15
LRFN4-202ENST00000393952 DLK2Q6UY11 383 aa28.46■■■□□ 2.15
LRFN4-202ENST00000393952 KRT26Q7Z3Y9 468 aa28.46■■■□□ 2.15
LRFN4-202ENST00000393952 DGKHQ86XP1 1220 aa28.46■■■□□ 2.15
LRFN4-202ENST00000393952 CCDC83Q8IWF9 413 aa28.46■■■□□ 2.15
LRFN4-202ENST00000393952 CEP95Q96GE4 821 aa28.46■■■□□ 2.15
LRFN4-202ENST00000393952 PFKFB2O60825 505 aa28.45■■■□□ 2.15
LRFN4-202ENST00000393952 JAG1P78504 1218 aa28.45■■■□□ 2.15
LRFN4-202ENST00000393952 ABCB5Q2M3G0 1257 aa28.45■■■□□ 2.15
LRFN4-202ENST00000393952 ANKS1AQ92625 1134 aa28.45■■■□□ 2.15
LRFN4-202ENST00000393952 SLKQ9H2G2 1235 aaPredicted RBP28.45■■■□□ 2.15
LRFN4-202ENST00000393952 HPS5Q9UPZ3 1129 aa28.45■■■□□ 2.15
LRFN4-202ENST00000393952 SLC12A7Q9Y666 1083 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms