RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 TRIM75PA6NK02 468 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 RNF113AO15541 343 aaKnown RBP19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 RAD21O60216 631 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 FMR1Q06787 632 aaKnown RBP eCLIP19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 SNCBQ16143 134 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 ANKRD13DQ6ZTN6 518 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 PLEKHG2Q9H7P9 1386 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 KIF23Q02241 960 aaPredicted RBP19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 NNTQ13423 1086 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 FMNL3Q8IVF7 1028 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 CEP89Q96ST8 783 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 MAP3K5Q99683 1374 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 KIF28PB7ZC32 967 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 ANKZF1Q9H8Y5 726 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 SEPT11Q9NVA2 429 aaKnown RBP19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 POLR3EQ9NVU0 708 aa19.05■□□□□ 0.64
TRAF3IP1-202ENST00000391993 BUB1O43683 1085 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 VIMP08670 466 aaKnown RBP19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 SEC24CP53992 1094 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 POLA2Q14181 598 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 CCDC40Q4G0X9 1142 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 METTL24Q5JXM2 366 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 INCENPQ9NQS7 918 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 CHUKO15111 745 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 RANBP6O60518 1105 aaKnown RBP19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 MMS19Q96T76 1030 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 ABCF2Q9UG63 623 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 TYW1BQ6NUM6 668 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 HIBCHQ6NVY1 386 aaPredicted RBP19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 TOM1L2Q6ZVM7 507 aa19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 NAA15Q9BXJ9 866 aaKnown RBP19.04■□□□□ 0.64
TRAF3IP1-202ENST00000391993 MCM7P33993 719 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 GUCY2DQ02846 1103 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 UHMK1Q8TAS1 419 aaKnown RBP19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 TRIM6Q9C030 488 aaPredicted RBP19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 SMARCAL1Q9NZC9 954 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 SALL3Q9BXA9 1300 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 ANKRD18BA2A2Z9 1011 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 ENO4A6NNW6 628 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 TEX11Q8IYF3 940 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 EID1Q9Y6B2 187 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 CCDC170Q8IYT3 715 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 AP1ARQ63HQ0 302 aa19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 NAIF1Q69YI7 327 aaPredicted RBP19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 THOC1Q96FV9 657 aaKnown RBP19.03■□□□□ 0.64
TRAF3IP1-202ENST00000391993 MPHOSPH10O00566 681 aaKnown RBP19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 NR5A1Q13285 461 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 RTN1Q16799 776 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 OR8K1Q8NGG5 319 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 ELF1P32519 619 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 SPAG1Q07617 926 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 TUBB2AQ13885 445 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 COG1Q8WTW3 980 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 ZNF274Q96GC6 653 aaPredicted RBP19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 CHP1Q99653 195 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 TUBB2BQ9BVA1 445 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 PPP1R12CQ9BZL4 782 aa19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 FAM207AQ9NSI2 230 aaPredicted RBP19.02■□□□□ 0.64
TRAF3IP1-202ENST00000391993 NLRP5P59047 1200 aa19.02■□□□□ 0.63
TRAF3IP1-202ENST00000391993 SHC4Q6S5L8 630 aa19.02■□□□□ 0.63
TRAF3IP1-202ENST00000391993 RSRC2Q7L4I2 434 aaKnown RBP19.02■□□□□ 0.63
TRAF3IP1-202ENST00000391993 IQSEC3Q9UPP2 1182 aaPredicted RBP19.02■□□□□ 0.63
TRAF3IP1-202ENST00000391993 ASXL2Q76L83 1435 aa19.02■□□□□ 0.63
TRAF3IP1-202ENST00000391993 CTDNEP1O95476 244 aa19.01■□□□□ 0.63
TRAF3IP1-202ENST00000391993 ATP1A1P05023 1023 aaKnown RBP19.01■□□□□ 0.63
TRAF3IP1-202ENST00000391993 ZC3H6P61129 1189 aaKnown RBP19.01■□□□□ 0.63
TRAF3IP1-202ENST00000391993 NCAPHQ15003 741 aa19.01■□□□□ 0.63
TRAF3IP1-202ENST00000391993 KRT14P02533 472 aa19.01■□□□□ 0.63
TRAF3IP1-202ENST00000391993 UBA7P41226 1012 aa19.01■□□□□ 0.63
TRAF3IP1-202ENST00000391993 ERBB3P21860 1342 aa19.01■□□□□ 0.63
TRAF3IP1-202ENST00000391993 MYO5CQ9NQX4 1742 aa19.01■□□□□ 0.63
TRAF3IP1-202ENST00000391993 ANGEL1Q9UNK9 670 aaKnown RBP19.01■□□□□ 0.63
TRAF3IP1-202ENST00000391993 FGAP02671 866 aa19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 STAT6P42226 847 aa19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 FXR1P51114 621 aaKnown RBP eCLIP19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 FAM69CQ0P6D2 419 aa19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 ARID4AP29374 1257 aaPredicted RBP19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 TTF1Q15361 905 aaPredicted RBP19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 METTL16Q86W50 562 aaKnown RBP19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 NELFBQ8WX92 580 aa19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 CDK5RAP3Q96JB5 506 aa19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 MFAP3LO75121 409 aa19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 ATP5JP18859 108 aa19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 PAX7P23759 505 aa19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 EIF4A1P60842 406 aaKnown RBP19■□□□□ 0.63
TRAF3IP1-202ENST00000391993 MYBL1P10243 752 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 ARFGAP2Q8N6H7 521 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 EPB41L5Q9HCM4 733 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 KLC4Q9NSK0 619 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 CDC27P30260 824 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 SPATA1Q5VX52 437 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 SMCR8Q8TEV9 937 aaPredicted RBP18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 EPSTI1Q96J88 318 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 YIPF3Q9GZM5 350 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 MYO1EQ12965 1108 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 C2CD5Q86YS7 1000 aa18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 LUC7LQ9NQ29 371 aaKnown RBP18.99■□□□□ 0.63
TRAF3IP1-202ENST00000391993 NFU1Q9UMS0 254 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms