RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 RUFY4Q6ZNE9 571 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 JAZF1Q86VZ6 243 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 NLGN1Q8N2Q7 840 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 C12orf50Q8NA57 414 aaPredicted RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 FAM13CQ8NE31 585 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 THAP3Q8WTV1 239 aaPredicted RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 PLVAPQ9BX97 442 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 ANTXR1Q9H6X2 564 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 CWC22Q9HCG8 908 aaKnown RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 DISC1Q9NRI5 854 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 KCNK4Q9NYG8 393 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 NOP53Q9NZM5 478 aaKnown RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 MKL2Q9ULH7 1088 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 PPP1R9AQ9ULJ8 1098 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 CSADQ9Y600 493 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 CHURC1-FNTBB4DL54 471 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 AGRPO00253 132 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 RGS13O14921 159 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 TMPRSS2O15393 492 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 WFS1O76024 890 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 IBSPP21815 317 aaPredicted RBP4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 GBP1P32455 592 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 GMPRP36959 345 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 SLC7A5Q01650 507 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 TCEAL1Q15170 157 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 AKAP4Q5JQC9 854 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 PPM1JQ5JR12 505 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 OVOS1Q6IE37 1185 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 FDX2Q6P4F2 183 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 VHLLQ6RSH7 139 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 LINC00114Q6XXX2 140 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 PHACTR4Q8IZ21 702 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 LRRC47Q8N1G4 583 aaKnown RBP4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 LILRB2Q8N423 598 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 BEND7Q8N7W2 519 aaPredicted RBP4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 JMYQ8N9B5 988 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 MFSD2AQ8NA29 543 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 ZCRB1Q8TBF4 217 aaKnown RBP4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 SH3TC2Q8TF17 1288 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 ACSF2Q96CM8 615 aaPredicted RBP4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 TMEM87BQ96K49 555 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 FANCD2OSQ96PS1 177 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 SLC9A7Q96T83 725 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 GSX1Q9H4S2 264 aaPredicted RBP4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 PIDD1Q9HB75 910 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 TJP2Q9UDY2 1190 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 PCOLCE2Q9UKZ9 415 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 ZNF214Q9UL59 606 aaPredicted RBP4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 PRKAB1Q9Y478 270 aa4.26□□□□□ -1.73
TRAJ40-201ENST00000390497 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 RNGTTO60942 597 aaKnown RBP4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 CDC45O75419 566 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 CST3P01034 146 aaPredicted RBP4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 ACRP10323 421 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 HOXB4P17483 251 aaPredicted RBP4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 ASPAP45381 313 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 NRG1Q02297 640 aaPredicted RBP4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 GNPTABQ3T906 1256 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 C6orf15Q6UXA7 325 aaPredicted RBP4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 ZNF662Q6ZS27 426 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 KIAA1211Q6ZU35 1233 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 ACAD11Q709F0 780 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 DYMQ7RTS9 669 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 MICAL1Q8TDZ2 1067 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 SMARCC1Q92922 1105 aaPredicted RBP4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 SGSM3Q96HU1 749 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 SLC26A8Q96RN1 970 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 APBA2Q99767 749 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 YIPF2Q9BWQ6 316 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 CEP41Q9BYV8 373 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 BRINP2Q9C0B6 783 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 SSU72Q9NP77 194 aaKnown RBP4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 TMEM260Q9NX78 707 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 KLHL3Q9UH77 587 aa4.25□□□□□ -1.73
TRAJ40-201ENST00000390497 KDM2BQ8NHM5 1336 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 LTBP3Q9NS15 1303 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 UPK3BL1B0FP48 263 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 C9orf172C9J069 976 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 UPK3BL2E5RIL1 263 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 SART1O43290 800 aaKnown RBP4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 LRIG2O94898 1065 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 TIAF1O95411 115 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 ADH5P11766 374 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 PMS1P54277 932 aaKnown RBP4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 SSRP1Q08945 709 aaKnown RBP4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 TTLL4Q14679 1199 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 TCEA2Q15560 299 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 ANKRD39Q53RE8 183 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 C2orf27AQ580R0 203 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 ZNF385CQ66K41 422 aaPredicted RBP4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 KIAA1211LQ6NV74 962 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 C16orf86Q6ZW13 317 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 PODNQ7Z5L7 613 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 SMYD4Q8IYR2 804 aaPredicted RBP4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 SVOPQ8N4V2 548 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 ZSWIM2Q8NEG5 633 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 UBASH3BQ8TF42 649 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms