RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 FCGRTP55899 365 aa29.82■■■□□ 2.36
TNFRSF4-201ENST00000379236 TREML2Q5T2D2 321 aa29.82■■■□□ 2.36
TNFRSF4-201ENST00000379236 ARMC5Q96C12 935 aa29.82■■■□□ 2.36
TNFRSF4-201ENST00000379236 DCTPP1Q9H773 170 aa29.82■■■□□ 2.36
TNFRSF4-201ENST00000379236 ZBTB21Q9ULJ3 1066 aa29.82■■■□□ 2.36
TNFRSF4-201ENST00000379236 CENPFP49454 3210 aa29.81■■■□□ 2.36
TNFRSF4-201ENST00000379236 OSBPP22059 807 aa29.81■■■□□ 2.36
TNFRSF4-201ENST00000379236 WDR18Q9BV38 432 aa29.81■■■□□ 2.36
TNFRSF4-201ENST00000379236 EHD4Q9H223 541 aa29.81■■■□□ 2.36
TNFRSF4-201ENST00000379236 MTMR2Q13614 643 aa29.8■■■□□ 2.36
TNFRSF4-201ENST00000379236 ZSCAN25Q6NSZ9 544 aa29.8■■■□□ 2.36
TNFRSF4-201ENST00000379236 TRIM47Q96LD4 638 aa29.8■■■□□ 2.36
TNFRSF4-201ENST00000379236 TMEM106CQ9BVX2 250 aa29.8■■■□□ 2.36
TNFRSF4-201ENST00000379236 ECHDC1Q9NTX5 307 aa29.8■■■□□ 2.36
TNFRSF4-201ENST00000379236 BAZ2AQ9UIF9 1905 aaKnown RBP29.8■■■□□ 2.36
TNFRSF4-201ENST00000379236 MYPNQ86TC9 1320 aa29.79■■■□□ 2.36
TNFRSF4-201ENST00000379236 TCRBV5S4A2TA0A5A2 114 aa29.79■■■□□ 2.36
TNFRSF4-201ENST00000379236 ADD2P35612 726 aa29.79■■■□□ 2.36
TNFRSF4-201ENST00000379236 RAET1EQ8TD07 263 aa29.79■■■□□ 2.36
TNFRSF4-201ENST00000379236 MCM9Q9NXL9 1143 aa29.79■■■□□ 2.36
TNFRSF4-201ENST00000379236 SRRDQ9UH36 339 aa29.79■■■□□ 2.36
TNFRSF4-201ENST00000379236 BACE1P56817 501 aa29.78■■■□□ 2.36
TNFRSF4-201ENST00000379236 SH3D19Q5HYK7 790 aa29.78■■■□□ 2.36
TNFRSF4-201ENST00000379236 LCORLQ8N3X6 602 aa29.78■■■□□ 2.36
TNFRSF4-201ENST00000379236 C19orf81C9J6K1 198 aa29.77■■■□□ 2.36
TNFRSF4-201ENST00000379236 USP17L10C9JJH3 530 aa29.77■■■□□ 2.36
TNFRSF4-201ENST00000379236 ZNF333Q96JL9 665 aa29.77■■■□□ 2.36
TNFRSF4-201ENST00000379236 ARMT1Q9H993 441 aa29.77■■■□□ 2.36
TNFRSF4-201ENST00000379236 CABP5Q9NP86 173 aa29.77■■■□□ 2.36
TNFRSF4-201ENST00000379236 GH2P01242 217 aa29.76■■■□□ 2.35
TNFRSF4-201ENST00000379236 CTGFP29279 349 aa29.76■■■□□ 2.35
TNFRSF4-201ENST00000379236 IRX3P78415 501 aaPredicted RBP29.76■■■□□ 2.35
TNFRSF4-201ENST00000379236 CERKLQ49MI3 558 aaPredicted RBP29.76■■■□□ 2.35
TNFRSF4-201ENST00000379236 TATDN1Q6P1N9 297 aa29.76■■■□□ 2.35
TNFRSF4-201ENST00000379236 ANKRD13CQ8N6S4 541 aa29.76■■■□□ 2.35
TNFRSF4-201ENST00000379236 SH3TC2Q8TF17 1288 aa29.76■■■□□ 2.35
TNFRSF4-201ENST00000379236 SDR42E1Q8WUS8 393 aa29.76■■■□□ 2.35
TNFRSF4-201ENST00000379236 DDRGK1Q96HY6 314 aa29.76■■■□□ 2.35
TNFRSF4-201ENST00000379236 MBD4O95243 580 aa29.75■■■□□ 2.35
TNFRSF4-201ENST00000379236 JAG1P78504 1218 aa29.75■■■□□ 2.35
TNFRSF4-201ENST00000379236 SHROOM1Q2M3G4 852 aaPredicted RBP29.75■■■□□ 2.35
TNFRSF4-201ENST00000379236 AMOTL1Q8IY63 956 aa29.75■■■□□ 2.35
TNFRSF4-201ENST00000379236 FEZ1Q99689 392 aa29.75■■■□□ 2.35
TNFRSF4-201ENST00000379236 ZBTB47Q9UFB7 747 aaPredicted RBP29.75■■■□□ 2.35
TNFRSF4-201ENST00000379236 MYCP01106 439 aaPredicted RBP29.74■■■□□ 2.35
TNFRSF4-201ENST00000379236 GCLCP48506 637 aaPredicted RBP29.74■■■□□ 2.35
TNFRSF4-201ENST00000379236 PLCD1P51178 756 aa29.74■■■□□ 2.35
TNFRSF4-201ENST00000379236 RAB3GAP1Q15042 981 aa29.74■■■□□ 2.35
TNFRSF4-201ENST00000379236 UBE3CQ15386 1083 aa29.74■■■□□ 2.35
TNFRSF4-201ENST00000379236 ABCB5Q2M3G0 1257 aa29.74■■■□□ 2.35
TNFRSF4-201ENST00000379236 PCDHB15Q9Y5E8 787 aa29.74■■■□□ 2.35
TNFRSF4-201ENST00000379236 POTEFA5A3E0 1075 aa29.73■■■□□ 2.35
TNFRSF4-201ENST00000379236 TNPO2O14787 897 aaKnown RBP29.73■■■□□ 2.35
TNFRSF4-201ENST00000379236 FAM110CQ1W6H9 321 aa29.73■■■□□ 2.35
TNFRSF4-201ENST00000379236 ASCC2Q9H1I8 757 aaPredicted RBP29.73■■■□□ 2.35
TNFRSF4-201ENST00000379236 DCP1AQ9NPI6 582 aaPredicted RBP29.73■■■□□ 2.35
TNFRSF4-201ENST00000379236 KIAA0100Q14667 2235 aaKnown RBP29.72■■■□□ 2.35
TNFRSF4-201ENST00000379236 USP17L2Q6R6M4 530 aa29.72■■■□□ 2.35
TNFRSF4-201ENST00000379236 CRBNQ96SW2 442 aa29.72■■■□□ 2.35
TNFRSF4-201ENST00000379236 ATP8A2Q9NTI2 1148 aa29.72■■■□□ 2.35
TNFRSF4-201ENST00000379236 PRKCZQ05513 592 aa29.71■■■□□ 2.35
TNFRSF4-201ENST00000379236 SLFNL1Q499Z3 407 aa29.71■■■□□ 2.35
TNFRSF4-201ENST00000379236 COA7Q96BR5 231 aa29.71■■■□□ 2.35
TNFRSF4-201ENST00000379236 BIN2Q9UBW5 565 aaPredicted RBP29.71■■■□□ 2.35
TNFRSF4-201ENST00000379236 MPHOSPH10O00566 681 aaKnown RBP29.7■■■□□ 2.35
TNFRSF4-201ENST00000379236 GRK4P32298 578 aa29.7■■■□□ 2.35
TNFRSF4-201ENST00000379236 PDE4DIPQ5VU43 2346 aa29.7■■■□□ 2.34
TNFRSF4-201ENST00000379236 DOCK3Q8IZD9 2030 aa29.69■■■□□ 2.34
TNFRSF4-201ENST00000379236 SHMT1P34896 483 aa29.69■■■□□ 2.34
TNFRSF4-201ENST00000379236 ZYXQ15942 572 aaKnown RBP29.69■■■□□ 2.34
TNFRSF4-201ENST00000379236 PRKAB2O43741 272 aa29.68■■■□□ 2.34
TNFRSF4-201ENST00000379236 HOXA7P31268 230 aaPredicted RBP29.68■■■□□ 2.34
TNFRSF4-201ENST00000379236 USP14P54578 494 aa29.68■■■□□ 2.34
TNFRSF4-201ENST00000379236 TSHZ3Q63HK5 1081 aa29.68■■■□□ 2.34
TNFRSF4-201ENST00000379236 SWAP70Q9UH65 585 aa29.68■■■□□ 2.34
TNFRSF4-201ENST00000379236 SLC4A4Q9Y6R1 1079 aa29.68■■■□□ 2.34
TNFRSF4-201ENST00000379236 ERC2O15083 957 aa29.67■■■□□ 2.34
TNFRSF4-201ENST00000379236 UBXN2AP68543 259 aa29.67■■■□□ 2.34
TNFRSF4-201ENST00000379236 LRRFIP1Q32MZ4 808 aaKnown RBP29.67■■■□□ 2.34
TNFRSF4-201ENST00000379236 KBTBD3Q8NAB2 608 aa29.67■■■□□ 2.34
TNFRSF4-201ENST00000379236 SLAIN1Q8ND83 568 aa29.67■■■□□ 2.34
TNFRSF4-201ENST00000379236 TAOK2Q9UL54 1235 aa29.67■■■□□ 2.34
TNFRSF4-201ENST00000379236 GABRQQ9UN88 632 aa29.67■■■□□ 2.34
TNFRSF4-201ENST00000379236 TTC41PQ6P2S7 1318 aa29.67■■■□□ 2.34
TNFRSF4-201ENST00000379236 CYP2D6P10635 497 aa29.66■■■□□ 2.34
TNFRSF4-201ENST00000379236 GABPAQ06546 454 aa29.66■■■□□ 2.34
TNFRSF4-201ENST00000379236 CHGBP05060 677 aa29.65■■■□□ 2.34
TNFRSF4-201ENST00000379236 EN2P19622 333 aaPredicted RBP29.65■■■□□ 2.34
TNFRSF4-201ENST00000379236 FLT3LGP49771 235 aa29.65■■■□□ 2.34
TNFRSF4-201ENST00000379236 HERVK_113P62684 666 aa29.64■■■□□ 2.34
TNFRSF4-201ENST00000379236 GTF3C2Q8WUA4 911 aaPredicted RBP29.64■■■□□ 2.34
TNFRSF4-201ENST00000379236 P2RX7Q99572 595 aaKnown RBP29.64■■■□□ 2.34
TNFRSF4-201ENST00000379236 PUS7LQ9H0K6 701 aaKnown RBP29.64■■■□□ 2.34
TNFRSF4-201ENST00000379236 EMILIN3Q9NT22 766 aa29.64■■■□□ 2.34
TNFRSF4-201ENST00000379236 ADCY3O60266 1144 aa29.63■■■□□ 2.33
TNFRSF4-201ENST00000379236 ZFYP08048 801 aaPredicted RBP29.63■■■□□ 2.33
TNFRSF4-201ENST00000379236 EVX2Q03828 476 aa29.62■■■□□ 2.33
TNFRSF4-201ENST00000379236 SEPT2Q15019 361 aa29.62■■■□□ 2.33
TNFRSF4-201ENST00000379236 CCAR1Q8IX12 1150 aaKnown RBP29.62■■■□□ 2.33
TNFRSF4-201ENST00000379236 DYNLL2Q96FJ2 89 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms