RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 ZKSCAN3Q9BRR0 538 aa28.76■■■□□ 2.2
ECHDC3-201ENST00000379215 CNOT7Q9UIV1 285 aaKnown RBP28.76■■■□□ 2.2
ECHDC3-201ENST00000379215 NID2Q14112 1375 aa28.76■■■□□ 2.19
ECHDC3-201ENST00000379215 WNT10BO00744 389 aa28.76■■■□□ 2.19
ECHDC3-201ENST00000379215 HMGN5P82970 282 aaKnown RBP28.76■■■□□ 2.19
ECHDC3-201ENST00000379215 FOXP4Q8IVH2 680 aaPredicted RBP28.76■■■□□ 2.19
ECHDC3-201ENST00000379215 ENAHQ8N8S7 591 aaPredicted RBP28.76■■■□□ 2.19
ECHDC3-201ENST00000379215 TRIM34Q9BYJ4 488 aa28.76■■■□□ 2.19
ECHDC3-201ENST00000379215 RNF181Q9P0P0 153 aa28.76■■■□□ 2.19
ECHDC3-201ENST00000379215 KIF3AQ9Y496 699 aa28.76■■■□□ 2.19
ECHDC3-201ENST00000379215 H7C1D1 291 aa28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 SOCS7O14512 581 aa28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 GRIN3BO60391 1043 aa28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 METAP2P50579 478 aaKnown RBP eCLIP28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 PPP2R5BQ15173 497 aa28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 FAM47AQ5JRC9 791 aa28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 CPLX2Q6PUV4 134 aaKnown RBP28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 DGKHQ86XP1 1220 aa28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 CRACR2BQ8N4Y2 399 aaPredicted RBP28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 SLC44A5Q8NCS7 719 aa28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 FAM151AQ8WW52 585 aa28.75■■■□□ 2.19
ECHDC3-201ENST00000379215 SBF1O95248 1867 aa28.74■■■□□ 2.19
ECHDC3-201ENST00000379215 TNNI2P48788 182 aa28.74■■■□□ 2.19
ECHDC3-201ENST00000379215 TNFAIP1Q13829 316 aa28.74■■■□□ 2.19
ECHDC3-201ENST00000379215 PLIN4Q96Q06 1357 aa28.74■■■□□ 2.19
ECHDC3-201ENST00000379215 CLRN2A0PK11 232 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 CALM1P0DP23 149 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 CALM2P0DP24 149 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 CALM3P0DP25 149 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 PDCP20941 246 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 GJB2P29033 226 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 GPR162Q16538 588 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 CATIPQ7Z7H3 387 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 NEDD1Q8NHV4 660 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 HPS5Q9UPZ3 1129 aa28.73■■■□□ 2.19
ECHDC3-201ENST00000379215 CCDC196A0A1B0GTZ2 297 aa28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 CPLX1O14810 134 aa28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 CDKL5O76039 1030 aa28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 CCT2P78371 535 aaKnown RBP28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 PPP4R3BQ5MIZ7 849 aa28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 ZFPM1Q8IX07 1006 aa28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 ANKS1AQ92625 1134 aa28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 CCDC17Q96LX7 622 aa28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 VEZTQ9HBM0 779 aa28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 ZC3H4Q9UPT8 1303 aaKnown RBP28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 METTL16Q86W50 562 aaKnown RBP28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 ZNF654Q8IZM8 581 aa28.72■■■□□ 2.19
ECHDC3-201ENST00000379215 DDTLA6NHG4 134 aaPredicted RBP28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 GOLGA8AA7E2F4 631 aa28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 TCP10L2B9ZVM9 353 aa28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 DDAH1O94760 285 aa28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 RAB3GAP1Q15042 981 aa28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 KIF4BQ2VIQ3 1234 aa28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 MICU3Q86XE3 530 aa28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 SMARCC2Q8TAQ2 1214 aa28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 GPRC5DQ9NZD1 345 aa28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 HERC5Q9UII4 1024 aaKnown RBP28.71■■■□□ 2.19
ECHDC3-201ENST00000379215 C9orf131Q5VYM1 1079 aa28.7■■■□□ 2.19
ECHDC3-201ENST00000379215 SENP2Q9HC62 589 aa28.7■■■□□ 2.19
ECHDC3-201ENST00000379215 NBPF9Q3BBW0 867 aa28.69■■■□□ 2.18
ECHDC3-201ENST00000379215 SH3BP5LQ7L8J4 393 aa28.69■■■□□ 2.18
ECHDC3-201ENST00000379215 NSUN7Q8NE18 718 aaKnown RBP28.69■■■□□ 2.18
ECHDC3-201ENST00000379215 CSRNP1Q96S65 589 aa28.69■■■□□ 2.18
ECHDC3-201ENST00000379215 SHMT1P34896 483 aa28.69■■■□□ 2.18
ECHDC3-201ENST00000379215 NCOA5Q9HCD5 579 aaKnown RBP28.69■■■□□ 2.18
ECHDC3-201ENST00000379215 KAT14Q9H8E8 782 aa28.68■■■□□ 2.18
ECHDC3-201ENST00000379215 IL17RBQ9NRM6 502 aa28.68■■■□□ 2.18
ECHDC3-201ENST00000379215 WDR33Q9C0J8 1336 aaKnown RBP28.68■■■□□ 2.18
ECHDC3-201ENST00000379215 CNTNAP1P78357 1384 aa28.67■■■□□ 2.18
ECHDC3-201ENST00000379215 SHTN1A0MZ66 631 aa28.67■■■□□ 2.18
ECHDC3-201ENST00000379215 PTPDC1A2A3K4 754 aa28.67■■■□□ 2.18
ECHDC3-201ENST00000379215 RTN1Q16799 776 aa28.67■■■□□ 2.18
ECHDC3-201ENST00000379215 FAM184AQ8NB25 1140 aa28.67■■■□□ 2.18
ECHDC3-201ENST00000379215 RBM28Q9NW13 759 aaKnown RBP28.67■■■□□ 2.18
ECHDC3-201ENST00000379215 LMOD1P29536 600 aaPredicted RBP28.66■■■□□ 2.18
ECHDC3-201ENST00000379215 RBM26Q5T8P6 1007 aaKnown RBP28.66■■■□□ 2.18
ECHDC3-201ENST00000379215 NMT2O60551 498 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 TBC1D10BQ4KMP7 808 aaPredicted RBP28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 RCSD1Q6JBY9 416 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 TATDN1Q6P1N9 297 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 SAMD7Q7Z3H4 446 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 MAP3K14Q99558 947 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 CTDNEP1O95476 244 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 NOVP48745 357 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 DPY19L2Q6NUT2 758 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 FANCBQ8NB91 859 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 NUP133Q8WUM0 1156 aa28.65■■■□□ 2.18
ECHDC3-201ENST00000379215 STX6O43752 255 aa28.64■■■□□ 2.18
ECHDC3-201ENST00000379215 JAK2O60674 1132 aa28.64■■■□□ 2.18
ECHDC3-201ENST00000379215 BRD1O95696 1058 aa28.64■■■□□ 2.18
ECHDC3-201ENST00000379215 CERKLQ49MI3 558 aaPredicted RBP28.64■■■□□ 2.18
ECHDC3-201ENST00000379215 APOBEC3FQ8IUX4 373 aaKnown RBP28.64■■■□□ 2.18
ECHDC3-201ENST00000379215 MYL10Q9BUA6 226 aa28.64■■■□□ 2.18
ECHDC3-201ENST00000379215 DNAJC18Q9H819 358 aa28.64■■■□□ 2.18
ECHDC3-201ENST00000379215 STX8Q9UNK0 236 aa28.64■■■□□ 2.18
ECHDC3-201ENST00000379215 SIPA1L1O43166 1804 aa28.64■■■□□ 2.17
ECHDC3-201ENST00000379215 TBC1D12O60347 775 aa28.63■■■□□ 2.17
ECHDC3-201ENST00000379215 AKR1B1P15121 316 aa28.63■■■□□ 2.17
ECHDC3-201ENST00000379215 SYT1P21579 422 aa28.63■■■□□ 2.17
ECHDC3-201ENST00000379215 TROAPQ12815 778 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms