RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 BCL11AQ9H165 835 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 TLR7Q9NYK1 1049 aaKnown RBP16.67■□□□□ 0.26
PRPF18-202ENST00000378572 FARP2O94887 1054 aaPredicted RBP16.66■□□□□ 0.26
PRPF18-202ENST00000378572 GDF11O95390 407 aa16.66■□□□□ 0.26
PRPF18-202ENST00000378572 CYP7A1P22680 504 aa16.66■□□□□ 0.26
PRPF18-202ENST00000378572 MTMR2Q13614 643 aa16.66■□□□□ 0.26
PRPF18-202ENST00000378572 FAM110CQ1W6H9 321 aa16.66■□□□□ 0.26
PRPF18-202ENST00000378572 ADGRA1Q86SQ6 560 aa16.66■□□□□ 0.26
PRPF18-202ENST00000378572 HTATIP2Q9BUP3 242 aa16.66■□□□□ 0.26
PRPF18-202ENST00000378572 PIH1D3Q9NQM4 214 aaKnown RBP16.66■□□□□ 0.26
PRPF18-202ENST00000378572 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
PRPF18-202ENST00000378572 GCLCP48506 637 aaPredicted RBP16.65■□□□□ 0.26
PRPF18-202ENST00000378572 RRP1BQ14684 758 aaKnown RBP16.65■□□□□ 0.26
PRPF18-202ENST00000378572 U2AF1L4Q8WU68 220 aaKnown RBP16.65■□□□□ 0.26
PRPF18-202ENST00000378572 PALD1Q9ULE6 856 aa16.65■□□□□ 0.26
PRPF18-202ENST00000378572 COLQQ9Y215 455 aaPredicted RBP16.65■□□□□ 0.26
PRPF18-202ENST00000378572 ASNSP08243 561 aa16.65■□□□□ 0.26
PRPF18-202ENST00000378572 USP5P45974 858 aa16.65■□□□□ 0.26
PRPF18-202ENST00000378572 DYNLL1P63167 89 aaKnown RBP16.65■□□□□ 0.26
PRPF18-202ENST00000378572 NUCB1Q02818 461 aa16.65■□□□□ 0.26
PRPF18-202ENST00000378572 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
PRPF18-202ENST00000378572 ASCC2Q9H1I8 757 aaPredicted RBP16.65■□□□□ 0.26
PRPF18-202ENST00000378572 TFRCP02786 760 aaKnown RBP16.64■□□□□ 0.25
PRPF18-202ENST00000378572 EXOC6BQ9Y2D4 811 aa16.64■□□□□ 0.25
PRPF18-202ENST00000378572 NOP58Q9Y2X3 529 aaKnown RBP16.64■□□□□ 0.25
PRPF18-202ENST00000378572 SIPA1L1O43166 1804 aa16.64■□□□□ 0.25
PRPF18-202ENST00000378572 MYO5AQ9Y4I1 1855 aaKnown RBP16.64■□□□□ 0.25
PRPF18-202ENST00000378572 CDK5RAP2Q96SN8 1893 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 PPP4CP60510 307 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 IRF5Q13568 498 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 AACSQ86V21 672 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 MAGEB6Q8N7X4 407 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 PXYLP1Q8TE99 480 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 DEFB118Q96PH6 123 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 NDUFB9Q9Y6M9 179 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 FOCADQ5VW36 1801 aa16.63■□□□□ 0.25
PRPF18-202ENST00000378572 HSP90AB4PQ58FF6 505 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 ERC1Q8IUD2 1116 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
PRPF18-202ENST00000378572 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
PRPF18-202ENST00000378572 EAF2Q96CJ1 260 aaPredicted RBP16.62■□□□□ 0.25
PRPF18-202ENST00000378572 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
PRPF18-202ENST00000378572 FEZ1Q99689 392 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
PRPF18-202ENST00000378572 ZBTB21Q9ULJ3 1066 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 CEP290O15078 2479 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 APBB1O00213 710 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 SGPL1O95470 568 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 BACE1P56817 501 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 DNAJC18Q9H819 358 aa16.62■□□□□ 0.25
PRPF18-202ENST00000378572 MAP3K12Q12852 859 aa16.61■□□□□ 0.25
PRPF18-202ENST00000378572 SHROOM1Q2M3G4 852 aaPredicted RBP16.61■□□□□ 0.25
PRPF18-202ENST00000378572 SH3D19Q5HYK7 790 aa16.61■□□□□ 0.25
PRPF18-202ENST00000378572 USP17L10C9JJH3 530 aa16.6■□□□□ 0.25
PRPF18-202ENST00000378572 ZYXQ15942 572 aaKnown RBP16.6■□□□□ 0.25
PRPF18-202ENST00000378572 ANKRD45Q5TZF3 282 aa16.6■□□□□ 0.25
PRPF18-202ENST00000378572 PAGR1Q9BTK6 254 aa16.6■□□□□ 0.25
PRPF18-202ENST00000378572 IL1RAPL2Q9NP60 686 aa16.6■□□□□ 0.25
PRPF18-202ENST00000378572 NR2E3Q9Y5X4 410 aa16.6■□□□□ 0.25
PRPF18-202ENST00000378572 IGSF3O75054 1194 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 GH2P01242 217 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 HMGCRP04035 888 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 JAG1P78504 1218 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRPF18-202ENST00000378572 MYH1P12882 1939 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 C19orf81C9J6K1 198 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRPF18-202ENST00000378572 HERVK_113P62684 666 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 GINM1Q9NU53 330 aa16.59■□□□□ 0.25
PRPF18-202ENST00000378572 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
PRPF18-202ENST00000378572 EVI5O60447 810 aa16.58■□□□□ 0.24
PRPF18-202ENST00000378572 CYP2B6P20813 491 aa16.58■□□□□ 0.24
PRPF18-202ENST00000378572 RAB3GAP1Q15042 981 aa16.58■□□□□ 0.24
PRPF18-202ENST00000378572 GPRC5AQ8NFJ5 357 aa16.58■□□□□ 0.24
PRPF18-202ENST00000378572 P2RX7Q99572 595 aaKnown RBP16.58■□□□□ 0.24
PRPF18-202ENST00000378572 LRRCC1Q9C099 1032 aa16.58■□□□□ 0.24
PRPF18-202ENST00000378572 DOCK3Q8IZD9 2030 aa16.57■□□□□ 0.24
PRPF18-202ENST00000378572 PEX10O60683 326 aa16.57■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L2Q6R6M4 530 aa16.57■□□□□ 0.24
PRPF18-202ENST00000378572 UBE2Q1Q7Z7E8 422 aa16.57■□□□□ 0.24
PRPF18-202ENST00000378572 KIF1BPQ96EK5 621 aa16.57■□□□□ 0.24
PRPF18-202ENST00000378572 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
PRPF18-202ENST00000378572 LNPKQ9C0E8 428 aa16.57■□□□□ 0.24
PRPF18-202ENST00000378572 PAK6Q9NQU5 681 aaPredicted RBP16.57■□□□□ 0.24
PRPF18-202ENST00000378572 MORF4L1Q9UBU8 362 aa16.57■□□□□ 0.24
PRPF18-202ENST00000378572 SERPINB13Q9UIV8 391 aa16.57■□□□□ 0.24
PRPF18-202ENST00000378572 POLR3DP05423 398 aaPredicted RBP16.56■□□□□ 0.24
PRPF18-202ENST00000378572 TTC6Q86TZ1 520 aa16.56■□□□□ 0.24
PRPF18-202ENST00000378572 HMX1Q9NP08 348 aaPredicted RBP16.56■□□□□ 0.24
PRPF18-202ENST00000378572 MAGEB6P1A0A0J9YX57 407 aa16.56■□□□□ 0.24
PRPF18-202ENST00000378572 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
PRPF18-202ENST00000378572 PDE4AP27815 886 aa16.56■□□□□ 0.24
PRPF18-202ENST00000378572 HOXA7P31268 230 aaPredicted RBP16.56■□□□□ 0.24
PRPF18-202ENST00000378572 TTF1Q15361 905 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms