RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 BAG1Q99933 345 aaPredicted RBP16.64■□□□□ 0.25
MSH5-201ENST00000375703 NOL10Q9BSC4 688 aaKnown RBP16.64■□□□□ 0.25
MSH5-201ENST00000375703 CSRNP2Q9H175 543 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 URI1O94763 535 aaPredicted RBP16.64■□□□□ 0.25
MSH5-201ENST00000375703 KIF20AO95235 890 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 ZNF18P17022 549 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 TRMT44Q8IYL2 757 aaKnown RBP16.64■□□□□ 0.25
MSH5-201ENST00000375703 IQSEC3Q9UPP2 1182 aaPredicted RBP16.64■□□□□ 0.25
MSH5-201ENST00000375703 PPP2R2CQ9Y2T4 447 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 KAT6BQ8WYB5 2073 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 ECM29Q5VYK3 1845 aa16.64■□□□□ 0.25
MSH5-201ENST00000375703 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
MSH5-201ENST00000375703 SPECC1LQ69YQ0 1117 aa16.63■□□□□ 0.25
MSH5-201ENST00000375703 SDR42E1Q8WUS8 393 aa16.63■□□□□ 0.25
MSH5-201ENST00000375703 ESR2Q92731 530 aa16.63■□□□□ 0.25
MSH5-201ENST00000375703 FAM53CQ9NYF3 392 aa16.63■□□□□ 0.25
MSH5-201ENST00000375703 ABCA3Q99758 1704 aa16.63■□□□□ 0.25
MSH5-201ENST00000375703 H2AFXP16104 143 aaPredicted RBP16.63■□□□□ 0.25
MSH5-201ENST00000375703 XBP1P17861 261 aa16.63■□□□□ 0.25
MSH5-201ENST00000375703 CHRNDQ07001 517 aa16.63■□□□□ 0.25
MSH5-201ENST00000375703 NUTM2AQ8IVF1 878 aaPredicted RBP16.63■□□□□ 0.25
MSH5-201ENST00000375703 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
MSH5-201ENST00000375703 RNF26Q9BY78 433 aaPredicted RBP16.63■□□□□ 0.25
MSH5-201ENST00000375703 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
MSH5-201ENST00000375703 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.63■□□□□ 0.25
MSH5-201ENST00000375703 STX10O60499 249 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 ADKP55263 362 aaKnown RBP16.62■□□□□ 0.25
MSH5-201ENST00000375703 PPP2R5BQ15173 497 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 ARHGAP29Q52LW3 1261 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 INTS5Q6P9B9 1019 aaKnown RBP16.62■□□□□ 0.25
MSH5-201ENST00000375703 UBXN4Q92575 508 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 SRRTQ9BXP5 876 aaKnown RBP16.62■□□□□ 0.25
MSH5-201ENST00000375703 ZNF446Q9NWS9 450 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 TNKSO95271 1327 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 SEC23AQ15436 765 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 TC2NQ8N9U0 490 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 MNS1Q8NEH6 495 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 SAMSN1Q9NSI8 373 aaKnown RBP16.62■□□□□ 0.25
MSH5-201ENST00000375703 SLIT2O94813 1529 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 LRP5O75197 1615 aa16.62■□□□□ 0.25
MSH5-201ENST00000375703 MAGEB6P1A0A0J9YX57 407 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 TRIM75PA6NK02 468 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 PARP10Q53GL7 1025 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 ADGRA1Q86SQ6 560 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 SPATA20Q8TB22 786 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 CCDC34Q96HJ3 373 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 MED15Q96RN5 788 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 CCDC87Q9NVE4 849 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 RAI14Q9P0K7 980 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
MSH5-201ENST00000375703 TIAM2Q8IVF5 1701 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 A0A0G2JS52 829 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 BMS1Q14692 1282 aaKnown RBP16.61■□□□□ 0.25
MSH5-201ENST00000375703 ZNF771Q7L3S4 317 aaPredicted RBP16.61■□□□□ 0.25
MSH5-201ENST00000375703 VPS54Q9P1Q0 977 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 ANAPC4Q9UJX5 808 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 DISP2A7MBM2 1401 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 GOLGA6L9A6NEM1 432 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 FANCGO15287 622 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
MSH5-201ENST00000375703 PLCD1P51178 756 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 NR1I3Q14994 352 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 DHX58Q96C10 678 aa16.61■□□□□ 0.25
MSH5-201ENST00000375703 AATFQ9NY61 560 aaKnown RBP eCLIP16.61■□□□□ 0.25
MSH5-201ENST00000375703 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 SMIM22K7EJ46 135 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
MSH5-201ENST00000375703 PARP3Q9Y6F1 533 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 ARAP2Q8WZ64 1704 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 FAM205CA6NFA0 338 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 CASQ1P31415 396 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 KRT2P35908 639 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 ATP6V1AP38606 617 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 AFMP43652 599 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 CRKLP46109 303 aaKnown RBP16.6■□□□□ 0.25
MSH5-201ENST00000375703 CLCN6P51797 869 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 PKN1Q16512 942 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 SHISA4Q96DD7 197 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 ZSCAN10Q96SZ4 725 aaPredicted RBP16.6■□□□□ 0.25
MSH5-201ENST00000375703 CARD6Q9BX69 1037 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 V9GY48 417 aaPredicted RBP16.6■□□□□ 0.25
MSH5-201ENST00000375703 DOCK2Q92608 1830 aa16.6■□□□□ 0.25
MSH5-201ENST00000375703 hCG_1642624A0A1W2PR95 340 aa16.59■□□□□ 0.25
MSH5-201ENST00000375703 CAMTA2O94983 1202 aa16.59■□□□□ 0.25
MSH5-201ENST00000375703 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
MSH5-201ENST00000375703 GNG11P61952 73 aa16.59■□□□□ 0.25
MSH5-201ENST00000375703 CATIPQ7Z7H3 387 aa16.59■□□□□ 0.25
MSH5-201ENST00000375703 ENAHQ8N8S7 591 aaPredicted RBP16.59■□□□□ 0.25
MSH5-201ENST00000375703 PHF20Q9BVI0 1012 aa16.59■□□□□ 0.25
MSH5-201ENST00000375703 CHD4Q14839 1912 aa16.59■□□□□ 0.25
MSH5-201ENST00000375703 PRPF3O43395 683 aaKnown RBP16.59■□□□□ 0.25
MSH5-201ENST00000375703 PRDM1O75626 825 aa16.59■□□□□ 0.25
MSH5-201ENST00000375703 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
MSH5-201ENST00000375703 IFIT1BQ5T764 474 aaKnown RBP16.59■□□□□ 0.25
MSH5-201ENST00000375703 TOGARAM2Q6ZUX3 1019 aa16.59■□□□□ 0.25
MSH5-201ENST00000375703 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
MSH5-201ENST00000375703 NTSR2O95665 410 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms