RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 PPP6R2O75170 966 aa18.87■□□□□ 0.61
VARS-215ENST00000375663 TNNI2P48788 182 aa18.87■□□□□ 0.61
VARS-215ENST00000375663 FANCBQ8NB91 859 aa18.87■□□□□ 0.61
VARS-215ENST00000375663 OR8K1Q8NGG5 319 aa18.87■□□□□ 0.61
VARS-215ENST00000375663 ACSBG1Q96GR2 724 aa18.87■□□□□ 0.61
VARS-215ENST00000375663 CLCN6P51797 869 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 SPATA1Q5VX52 437 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 RPGRQ92834 1020 aaKnown RBP18.86■□□□□ 0.61
VARS-215ENST00000375663 TBCAO75347 108 aaKnown RBP18.86■□□□□ 0.61
VARS-215ENST00000375663 CETN2P41208 172 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 ARHGEF25Q86VW2 580 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 DDX41Q9UJV9 622 aaKnown RBP18.86■□□□□ 0.61
VARS-215ENST00000375663 GOLGA6L10A0A0M3HER8 536 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 PPP1R2P41236 205 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 WHAMMP3Q1A5X7 153 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 SECISBP2LQ93073 1101 aaKnown RBP18.86■□□□□ 0.61
VARS-215ENST00000375663 RRP36Q96EU6 259 aaKnown RBP18.86■□□□□ 0.61
VARS-215ENST00000375663 PHLPP2Q6ZVD8 1323 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 M0R2C6 588 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 C8orf74Q6P047 294 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 CUL5Q93034 780 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 NUP58Q9BVL2 599 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 SAR1BQ9Y6B6 198 aa18.86■□□□□ 0.61
VARS-215ENST00000375663 GOLGA6BA6NDN3 693 aa18.85■□□□□ 0.61
VARS-215ENST00000375663 CTNNBL1Q8WYA6 563 aaPredicted RBP18.85■□□□□ 0.61
VARS-215ENST00000375663 PSMB7Q99436 277 aa18.85■□□□□ 0.61
VARS-215ENST00000375663 RABEP2Q9H5N1 569 aa18.85■□□□□ 0.61
VARS-215ENST00000375663 EPHA10Q5JZY3 1008 aa18.85■□□□□ 0.61
VARS-215ENST00000375663 SV2BQ7L1I2 683 aa18.85■□□□□ 0.61
VARS-215ENST00000375663 TRAF5O00463 557 aa18.85■□□□□ 0.61
VARS-215ENST00000375663 NDUFAB1O14561 156 aa18.85■□□□□ 0.61
VARS-215ENST00000375663 KCNF1Q9H3M0 494 aa18.85■□□□□ 0.61
VARS-215ENST00000375663 IGKV5-2P06315 115 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 TMEM132AQ24JP5 1023 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 IL25Q9H293 177 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 TNNC1P63316 161 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 AIFM3Q96NN9 605 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 CDC23Q9UJX2 597 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 DENND2AQ9ULE3 1009 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 NLRP1Q9C000 1473 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 IQGAP1P46940 1657 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 ANKRD62A6NC57 917 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 ERMNQ8TAM6 284 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 FBXO3Q9UK99 471 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 REREQ9P2R6 1566 aa18.84■□□□□ 0.61
VARS-215ENST00000375663 MAGEA1P43355 309 aa18.83■□□□□ 0.61
VARS-215ENST00000375663 SND1Q7KZF4 910 aaKnown RBP eCLIP18.83■□□□□ 0.61
VARS-215ENST00000375663 GPIHBP1Q8IV16 184 aa18.83■□□□□ 0.61
VARS-215ENST00000375663 GJB4Q9NTQ9 266 aa18.83■□□□□ 0.61
VARS-215ENST00000375663 PLEKHG1Q9ULL1 1385 aa18.83■□□□□ 0.61
VARS-215ENST00000375663 ATP8B1O43520 1251 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 CNNM4Q6P4Q7 775 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 SRGAP1Q7Z6B7 1085 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 KCNJ18B7U540 433 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 KCNJ12Q14500 433 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 SLFNL1Q499Z3 407 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 VSTM4Q8IW00 320 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 SYCP3Q8IZU3 236 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 SETDB2Q96T68 719 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 GOLPH3LQ9H4A5 285 aa18.83■□□□□ 0.6
VARS-215ENST00000375663 CHD1O14646 1710 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 GBP2P32456 591 aaPredicted RBP18.82■□□□□ 0.6
VARS-215ENST00000375663 PPARAQ07869 468 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 UBE3CQ15386 1083 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 TERF2Q15554 542 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 LONRF2Q1L5Z9 754 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 CCDC121Q6ZUS5 278 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 PDE11AQ9HCR9 933 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 MKRN1Q9UHC7 482 aaKnown RBP18.82■□□□□ 0.6
VARS-215ENST00000375663 MROH5Q6ZUA9 1318 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 USP27XA6NNY8 438 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 RAPGEF1Q13905 1077 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 PI16Q6UXB8 463 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 STXBP4Q6ZWJ1 553 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 LMBR1Q8WVP7 490 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
VARS-215ENST00000375663 CIAO1O76071 339 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 CCDC172P0C7W6 258 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 ERCC5P28715 1186 aaPredicted RBP18.82■□□□□ 0.6
VARS-215ENST00000375663 RNASE9P60153 205 aaKnown RBP18.82■□□□□ 0.6
VARS-215ENST00000375663 MORC3Q14149 939 aa18.82■□□□□ 0.6
VARS-215ENST00000375663 TRMT1LQ7Z2T5 733 aaKnown RBP18.82■□□□□ 0.6
VARS-215ENST00000375663 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.82■□□□□ 0.6
VARS-215ENST00000375663 VGLL3A8MV65 326 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 CASP14P31944 242 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 CTSWP56202 376 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 CCDC155Q8N6L0 562 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 TNKSO95271 1327 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 PCCAP05165 728 aaPredicted RBP18.81■□□□□ 0.6
VARS-215ENST00000375663 POTEJP0CG39 1038 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 PNMA6AP0CW24 399 aaPredicted RBP18.81■□□□□ 0.6
VARS-215ENST00000375663 ERCC3P19447 782 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 TNIP1Q15025 636 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 RPGRIP1Q96KN7 1286 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 PHKA1P46020 1223 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 ZBTB38Q8NAP3 1195 aaPredicted RBP18.81■□□□□ 0.6
VARS-215ENST00000375663 ERVV-2B6SEH9 535 aa18.81■□□□□ 0.6
VARS-215ENST00000375663 PUS7LQ9H0K6 701 aaKnown RBP18.81■□□□□ 0.6
VARS-215ENST00000375663 HAUS4Q9H6D7 363 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms