RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ZEB2O60315 1214 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 TNNC1P63316 161 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 TOB2Q14106 344 aaPredicted RBP19.55■□□□□ 0.72
PTPRU-202ENST00000373779 ZNF804AQ7Z570 1209 aa19.55■□□□□ 0.72
PTPRU-202ENST00000373779 SECISBP2LQ93073 1101 aaKnown RBP19.55■□□□□ 0.72
PTPRU-202ENST00000373779 ERVV-2B6SEH9 535 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 PDE6AP16499 860 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 IFNL3Q8IZI9 196 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 hCG_1642624A0A1W2PR95 340 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 CIAO1O76071 339 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 GPATCH11Q8N954 259 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 NYXQ9GZU5 481 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 ANKRD2Q9GZV1 360 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 DDIT3P35638 169 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 STX10O60499 249 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 BTBD18B2RXH4 712 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 LDHBP07195 334 aaKnown RBP19.54■□□□□ 0.72
PTPRU-202ENST00000373779 PARP1P09874 1014 aaKnown RBP19.54■□□□□ 0.72
PTPRU-202ENST00000373779 CTSWP56202 376 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 CCDC155Q8N6L0 562 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 OTUD6BQ8N6M0 293 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 FBXO3Q9UK99 471 aa19.54■□□□□ 0.72
PTPRU-202ENST00000373779 ATP2C2O75185 946 aa19.53■□□□□ 0.72
PTPRU-202ENST00000373779 PTPN12Q05209 780 aaKnown RBP19.53■□□□□ 0.72
PTPRU-202ENST00000373779 PPARAQ07869 468 aa19.53■□□□□ 0.72
PTPRU-202ENST00000373779 WHAMMP3Q1A5X7 153 aa19.53■□□□□ 0.72
PTPRU-202ENST00000373779 PPRC1Q5VV67 1664 aaKnown RBP19.53■□□□□ 0.72
PTPRU-202ENST00000373779 PCDHA5Q9Y5H7 936 aa19.53■□□□□ 0.72
PTPRU-202ENST00000373779 CMTR1Q8N1G2 835 aaKnown RBP19.53■□□□□ 0.72
PTPRU-202ENST00000373779 ARFGAP2Q8N6H7 521 aa19.53■□□□□ 0.72
PTPRU-202ENST00000373779 RASAL2Q9UJF2 1139 aa19.53■□□□□ 0.72
PTPRU-202ENST00000373779 RFC4P35249 363 aa19.52■□□□□ 0.72
PTPRU-202ENST00000373779 KIF23Q02241 960 aaPredicted RBP19.52■□□□□ 0.72
PTPRU-202ENST00000373779 SARM1Q6SZW1 724 aa19.52■□□□□ 0.72
PTPRU-202ENST00000373779 PUS3Q9BZE2 481 aaKnown RBP19.52■□□□□ 0.72
PTPRU-202ENST00000373779 C8orf74Q6P047 294 aa19.52■□□□□ 0.72
PTPRU-202ENST00000373779 JAG2Q9Y219 1238 aa19.52■□□□□ 0.72
PTPRU-202ENST00000373779 ADORA1P30542 326 aa19.52■□□□□ 0.72
PTPRU-202ENST00000373779 PHLPP2Q6ZVD8 1323 aa19.52■□□□□ 0.72
PTPRU-202ENST00000373779 DDB1Q16531 1140 aa19.52■□□□□ 0.71
PTPRU-202ENST00000373779 GOLGA6CA6NDK9 693 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 GOLGA6DP0CG33 693 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 PRPHP41219 470 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 ARHGEF25Q86VW2 580 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 GOLGA6AQ9NYA3 693 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 PICALMQ13492 652 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 FANCBQ8NB91 859 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 A2ML1A8K2U0 1454 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 PLCG2P16885 1265 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 CCNT1O60563 726 aaKnown RBP19.51■□□□□ 0.71
PTPRU-202ENST00000373779 PCCAP05165 728 aaPredicted RBP19.51■□□□□ 0.71
PTPRU-202ENST00000373779 SPATA1Q5VX52 437 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 TRAF5O00463 557 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 ZBTB38Q8NAP3 1195 aaPredicted RBP19.51■□□□□ 0.71
PTPRU-202ENST00000373779 PGBD1Q96JS3 809 aa19.51■□□□□ 0.71
PTPRU-202ENST00000373779 RPAP1Q9BWH6 1393 aaPredicted RBP19.5■□□□□ 0.71
PTPRU-202ENST00000373779 KCNJ18B7U540 433 aa19.5■□□□□ 0.71
PTPRU-202ENST00000373779 KCNJ12Q14500 433 aa19.5■□□□□ 0.71
PTPRU-202ENST00000373779 UBE3CQ15386 1083 aa19.5■□□□□ 0.71
PTPRU-202ENST00000373779 CCDC121Q6ZUS5 278 aa19.5■□□□□ 0.71
PTPRU-202ENST00000373779 MORC3Q14149 939 aa19.5■□□□□ 0.71
PTPRU-202ENST00000373779 ZSCAN26Q16670 478 aa19.5■□□□□ 0.71
PTPRU-202ENST00000373779 APOA5Q6Q788 366 aa19.5■□□□□ 0.71
PTPRU-202ENST00000373779 PLA2G4DQ86XP0 818 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 INCENPQ9NQS7 918 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 GOLGA6BA6NDN3 693 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 GOLGA8FQ08AF8 430 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 GOLGA8DPQ0D2H9 430 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 IPO4Q8TEX9 1081 aaKnown RBP19.49■□□□□ 0.71
PTPRU-202ENST00000373779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.49■□□□□ 0.71
PTPRU-202ENST00000373779 SAR1BQ9Y6B6 198 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 NBPF14Q5TI25 921 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 TPTE2Q6XPS3 522 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 CCDC65Q8IXS2 484 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 NSRP1Q9H0G5 558 aaKnown RBP19.49■□□□□ 0.71
PTPRU-202ENST00000373779 KRT13P13646 458 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 NCBP1Q09161 790 aaKnown RBP19.49■□□□□ 0.71
PTPRU-202ENST00000373779 OR8K1Q8NGG5 319 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 RABGGTAQ92696 567 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 RPGRIP1Q96KN7 1286 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 NOX5Q96PH1 765 aa19.49■□□□□ 0.71
PTPRU-202ENST00000373779 AATFQ9NY61 560 aaKnown RBP eCLIP19.49■□□□□ 0.71
PTPRU-202ENST00000373779 HIBADHP31937 336 aaKnown RBP19.48■□□□□ 0.71
PTPRU-202ENST00000373779 RAPGEF1Q13905 1077 aa19.48■□□□□ 0.71
PTPRU-202ENST00000373779 CCDC91Q7Z6B0 441 aa19.48■□□□□ 0.71
PTPRU-202ENST00000373779 PLVAPQ9BX97 442 aa19.48■□□□□ 0.71
PTPRU-202ENST00000373779 ATP10DQ9P241 1426 aa19.48■□□□□ 0.71
PTPRU-202ENST00000373779 ST5P78524 1137 aa19.48■□□□□ 0.71
PTPRU-202ENST00000373779 ARID5BQ14865 1188 aa19.48■□□□□ 0.71
PTPRU-202ENST00000373779 OSBP2Q969R2 916 aa19.48■□□□□ 0.71
PTPRU-202ENST00000373779 DDX17Q92841 729 aaKnown RBP19.47■□□□□ 0.71
PTPRU-202ENST00000373779 ZSCAN10Q96SZ4 725 aaPredicted RBP19.47■□□□□ 0.71
PTPRU-202ENST00000373779 TNKSO95271 1327 aa19.47■□□□□ 0.71
PTPRU-202ENST00000373779 ATP8B1O43520 1251 aa19.47■□□□□ 0.71
PTPRU-202ENST00000373779 TXKP42681 527 aa19.47■□□□□ 0.71
PTPRU-202ENST00000373779 NONOQ15233 471 aaKnown RBP eCLIP19.47■□□□□ 0.71
PTPRU-202ENST00000373779 IFT20Q8IY31 132 aa19.47■□□□□ 0.71
PTPRU-202ENST00000373779 MKRN1Q9UHC7 482 aaKnown RBP19.47■□□□□ 0.71
PTPRU-202ENST00000373779 SAP30BPQ9UHR5 308 aaKnown RBP19.47■□□□□ 0.71
PTPRU-202ENST00000373779 KRT25Q7Z3Z0 450 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms