RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TROAPQ12815 778 aa28.98■■■□□ 2.23
CTSA-203ENST00000372459 MKNK2Q9HBH9 465 aa28.98■■■□□ 2.23
CTSA-203ENST00000372459 POLR3EQ9NVU0 708 aa28.98■■■□□ 2.23
CTSA-203ENST00000372459 SF3B2Q13435 895 aaKnown RBP28.97■■■□□ 2.23
CTSA-203ENST00000372459 GNL2Q13823 731 aaKnown RBP28.97■■■□□ 2.23
CTSA-203ENST00000372459 CNKSR1Q969H4 720 aa28.97■■■□□ 2.23
CTSA-203ENST00000372459 RNF26Q9BY78 433 aaPredicted RBP28.97■■■□□ 2.23
CTSA-203ENST00000372459 NUP62CLQ9H1M0 184 aa28.97■■■□□ 2.23
CTSA-203ENST00000372459 DACT1Q9NYF0 836 aa28.97■■■□□ 2.23
CTSA-203ENST00000372459 CCDC82Q8N4S0 544 aa28.97■■■□□ 2.23
CTSA-203ENST00000372459 DYNLL2Q96FJ2 89 aa28.97■■■□□ 2.23
CTSA-203ENST00000372459 ZNF287Q9HBT7 754 aa28.97■■■□□ 2.23
CTSA-203ENST00000372459 DAGLAQ9Y4D2 1042 aa28.97■■■□□ 2.23
CTSA-203ENST00000372459 NMT2O60551 498 aa28.96■■■□□ 2.23
CTSA-203ENST00000372459 YEATS4O95619 227 aa28.96■■■□□ 2.23
CTSA-203ENST00000372459 TFAP4Q01664 338 aa28.96■■■□□ 2.23
CTSA-203ENST00000372459 CMTR1Q8N1G2 835 aaKnown RBP28.96■■■□□ 2.23
CTSA-203ENST00000372459 SAP30BPQ9UHR5 308 aaKnown RBP28.96■■■□□ 2.23
CTSA-203ENST00000372459 FLT1P17948 1338 aa28.95■■■□□ 2.23
CTSA-203ENST00000372459 UBE2Q2LH0YL09 131 aa28.95■■■□□ 2.23
CTSA-203ENST00000372459 GUCY1A2P33402 732 aa28.95■■■□□ 2.23
CTSA-203ENST00000372459 BAG6P46379 1132 aa28.95■■■□□ 2.23
CTSA-203ENST00000372459 CCDC178Q5BJE1 867 aa28.95■■■□□ 2.23
CTSA-203ENST00000372459 TAOK2Q9UL54 1235 aa28.95■■■□□ 2.23
CTSA-203ENST00000372459 U2AF2P26368 475 aaKnown RBP eCLIP28.95■■■□□ 2.22
CTSA-203ENST00000372459 PLCD1P51178 756 aa28.95■■■□□ 2.22
CTSA-203ENST00000372459 AKAP17AQ02040 695 aaKnown RBP28.95■■■□□ 2.22
CTSA-203ENST00000372459 CCDC173Q0VFZ6 552 aa28.95■■■□□ 2.22
CTSA-203ENST00000372459 PODNQ7Z5L7 613 aa28.95■■■□□ 2.22
CTSA-203ENST00000372459 CERS5Q8N5B7 392 aa28.95■■■□□ 2.22
CTSA-203ENST00000372459 LINC00301Q8NCQ3 95 aa28.95■■■□□ 2.22
CTSA-203ENST00000372459 CHRNA5P30532 468 aa28.94■■■□□ 2.22
CTSA-203ENST00000372459 ME1P48163 572 aa28.94■■■□□ 2.22
CTSA-203ENST00000372459 STK38Q15208 465 aa28.94■■■□□ 2.22
CTSA-203ENST00000372459 ZNF444Q8N0Y2 327 aaPredicted RBP28.94■■■□□ 2.22
CTSA-203ENST00000372459 KCNG4Q8TDN1 519 aa28.94■■■□□ 2.22
CTSA-203ENST00000372459 CLIC4Q9Y696 253 aa28.94■■■□□ 2.22
CTSA-203ENST00000372459 DDX60LQ5H9U9 1706 aaKnown RBP28.94■■■□□ 2.22
CTSA-203ENST00000372459 SAFBQ15424 915 aaKnown RBP eCLIP28.93■■■□□ 2.22
CTSA-203ENST00000372459 DGKHQ86XP1 1220 aa28.93■■■□□ 2.22
CTSA-203ENST00000372459 CTCFLQ8NI51 663 aaPredicted RBP28.93■■■□□ 2.22
CTSA-203ENST00000372459 TTF2Q9UNY4 1162 aaKnown RBP28.93■■■□□ 2.22
CTSA-203ENST00000372459 SLX4Q8IY92 1834 aa28.93■■■□□ 2.22
CTSA-203ENST00000372459 NR1I2O75469 434 aa28.93■■■□□ 2.22
CTSA-203ENST00000372459 MMP1P03956 469 aa28.93■■■□□ 2.22
CTSA-203ENST00000372459 FBXO41Q8TF61 875 aa28.93■■■□□ 2.22
CTSA-203ENST00000372459 F8W031 263 aaPredicted RBP28.92■■■□□ 2.22
CTSA-203ENST00000372459 SF3A1Q15459 793 aaKnown RBP28.92■■■□□ 2.22
CTSA-203ENST00000372459 MAP3K11Q16584 847 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 ANO1Q5XXA6 986 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 CCAR1Q8IX12 1150 aaKnown RBP28.92■■■□□ 2.22
CTSA-203ENST00000372459 TRIM44Q96DX7 344 aaPredicted RBP28.92■■■□□ 2.22
CTSA-203ENST00000372459 PPP1R9BQ96SB3 815 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.92■■■□□ 2.22
CTSA-203ENST00000372459 CLSTN2Q9H4D0 955 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 TCP11L1Q9NUJ3 509 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 TSPY3P0CV98 308 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 TSPY8P0CW00 308 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 RCSD1Q6JBY9 416 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 TNMDQ9H2S6 317 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 KAT14Q9H8E8 782 aa28.92■■■□□ 2.22
CTSA-203ENST00000372459 PRPF3O43395 683 aaKnown RBP28.91■■■□□ 2.22
CTSA-203ENST00000372459 FUT2Q10981 343 aa28.91■■■□□ 2.22
CTSA-203ENST00000372459 C16orf86Q6ZW13 317 aa28.91■■■□□ 2.22
CTSA-203ENST00000372459 TMTC3Q6ZXV5 915 aa28.91■■■□□ 2.22
CTSA-203ENST00000372459 RNF214Q8ND24 703 aa28.91■■■□□ 2.22
CTSA-203ENST00000372459 ANKS1AQ92625 1134 aa28.91■■■□□ 2.22
CTSA-203ENST00000372459 FUCA2Q9BTY2 467 aa28.91■■■□□ 2.22
CTSA-203ENST00000372459 FOCADQ5VW36 1801 aa28.91■■■□□ 2.22
CTSA-203ENST00000372459 MYH6P13533 1939 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 XBP1P17861 261 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 DBNDD1Q9H9R9 158 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 IL17RBQ9NRM6 502 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 PCDHA7Q9UN72 937 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 MYH1P12882 1939 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 ESPNB1AK53 854 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 SPTLC2O15270 562 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 PLEKHA8P1O95397 391 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 ADALQ6DHV7 355 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 CCDC73Q6ZRK6 1079 aa28.9■■■□□ 2.22
CTSA-203ENST00000372459 RASA1P20936 1047 aa28.89■■■□□ 2.22
CTSA-203ENST00000372459 CAMK4Q16566 473 aa28.89■■■□□ 2.22
CTSA-203ENST00000372459 SLC44A5Q8NCS7 719 aa28.89■■■□□ 2.22
CTSA-203ENST00000372459 MXD3Q9BW11 206 aa28.89■■■□□ 2.22
CTSA-203ENST00000372459 CDK8P49336 464 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 DIS3L2Q8IYB7 885 aaKnown RBP28.88■■■□□ 2.21
CTSA-203ENST00000372459 FOXP1Q9H334 677 aaPredicted RBP28.88■■■□□ 2.21
CTSA-203ENST00000372459 ZNF219Q9P2Y4 722 aaPredicted RBP28.88■■■□□ 2.21
CTSA-203ENST00000372459 A0A1W2PQ27 194 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 A0A1W2PQ64 194 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 A0A1W2PQD8 194 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 CCDC192P0DO97 292 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 KIF5BP33176 963 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 CC2D2BQ6DHV5 1058 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 HHIPL2Q6UWX4 724 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 NOSTRINQ8IVI9 506 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 C7orf43Q8WVR3 580 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 KCNJ14Q9UNX9 436 aa28.88■■■□□ 2.21
CTSA-203ENST00000372459 MAP3K14Q99558 947 aa28.87■■■□□ 2.21
CTSA-203ENST00000372459 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms